SOLTUB.AGRIA.G00000003147

Description : Protoheme IX farnesyltransferase, mitochondrial-like protein

Gene families : OG_02_0018245 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000003147
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_183

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004311	farnesyltranstransferase activity	None	Extended
MF	GO:0004659	prenyltransferase activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005730	nucleolus	IEA	AHRD
CC	GO:0005743	mitochondrial inner membrane	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006778	porphyrin-containing compound metabolic process	None	Extended
BP	GO:0006779	porphyrin-containing compound biosynthetic process	None	Extended
BP	GO:0006783	heme biosynthetic process	None	Extended
BP	GO:0006784	heme A biosynthetic process	IEA	AHRD
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008495	protoheme IX farnesyltransferase activity	IEA	AHRD
BP	GO:0008535	respiratory chain complex IV assembly	IEA	AHRD
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009060	aerobic respiration	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015980	energy derivation by oxidation of organic compounds	None	Extended
CC	GO:0016020	membrane	None	Extended
CC	GO:0016021	integral component of membrane	IEA	AHRD
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	None	Extended
BP	GO:0017004	cytochrome complex assembly	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
CC	GO:0019866	organelle inner membrane	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0031966	mitochondrial membrane	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033013	tetrapyrrole metabolic process	None	Extended
BP	GO:0033014	tetrapyrrole biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042168	heme metabolic process	None	Extended
BP	GO:0042440	pigment metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0045333	cellular respiration	None	Extended
BP	GO:0046148	pigment biosynthetic process	None	Extended
BP	GO:0046160	heme a metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048033	heme O metabolic process	None	Extended
BP	GO:0048034	heme O biosynthetic process	IEA	AHRD
BP	GO:0065003	protein-containing complex assembly	None	Extended
CC	GO:0070069	cytochrome complex	IEA	AHRD
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001933	negative regulation of protein phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0001959	regulation of cytokine-mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0001960	negative regulation of cytokine-mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0002683	negative regulation of immune system process	IEP	Predict GO terms from Neighborhoods
MF	GO:0004750	D-ribulose-phosphate 3-epimerase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005126	cytokine receptor binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0005133	interferon-gamma receptor binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005750	mitochondrial respiratory chain complex III	IEP	Predict GO terms from Neighborhoods
CC	GO:0005788	endoplasmic reticulum lumen	IEP	Predict GO terms from Neighborhoods
CC	GO:0005794	Golgi apparatus	IEP	Predict GO terms from Neighborhoods
CC	GO:0005884	actin filament	IEP	Predict GO terms from Neighborhoods
BP	GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c	IEP	Predict GO terms from Neighborhoods
BP	GO:0006458	'de novo' protein folding	IEP	Predict GO terms from Neighborhoods
BP	GO:0006469	negative regulation of protein kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006810	transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006919	activation of cysteine-type endopeptidase activity involved in apoptotic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007029	endoplasmic reticulum organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007528	neuromuscular junction development	IEP	Predict GO terms from Neighborhoods
BP	GO:0007569	obsolete cell aging	IEP	Predict GO terms from Neighborhoods
MF	GO:0008121	ubiquinol-cytochrome-c reductase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009052	pentose-phosphate shunt, non-oxidative branch	IEP	Predict GO terms from Neighborhoods
MF	GO:0009055	electron transfer activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0009295	nucleoid	IEP	Predict GO terms from Neighborhoods
CC	GO:0009504	cell plate	IEP	Predict GO terms from Neighborhoods
CC	GO:0009510	plasmodesmatal desmotubule	IEP	Predict GO terms from Neighborhoods
CC	GO:0009898	cytoplasmic side of plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0010243	response to organonitrogen compound	IEP	Predict GO terms from Neighborhoods
BP	GO:0010466	negative regulation of peptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010563	negative regulation of phosphorus metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010827	regulation of glucose transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0010950	positive regulation of endopeptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010951	negative regulation of endopeptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010952	positive regulation of peptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015035	protein-disulfide reductase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015036	disulfide oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Predict GO terms from Neighborhoods
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	Predict GO terms from Neighborhoods
MF	GO:0016854	racemase and epimerase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	IEP	Predict GO terms from Neighborhoods
BP	GO:0019321	pentose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019323	pentose catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019646	aerobic electron transport chain	IEP	Predict GO terms from Neighborhoods
BP	GO:0022900	electron transport chain	IEP	Predict GO terms from Neighborhoods
BP	GO:0022904	respiratory electron transport chain	IEP	Predict GO terms from Neighborhoods
CC	GO:0030176	integral component of endoplasmic reticulum membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0030433	ubiquitin-dependent ERAD pathway	IEP	Predict GO terms from Neighborhoods
MF	GO:0030695	GTPase regulator activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0031227	intrinsic component of endoplasmic reticulum membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0031396	regulation of protein ubiquitination	IEP	Predict GO terms from Neighborhoods
BP	GO:0031398	positive regulation of protein ubiquitination	IEP	Predict GO terms from Neighborhoods
BP	GO:0031399	regulation of protein modification process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031401	positive regulation of protein modification process	IEP	Predict GO terms from Neighborhoods
CC	GO:0031974	membrane-enclosed lumen	IEP	Predict GO terms from Neighborhoods
BP	GO:0032088	negative regulation of NF-kappaB transcription factor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0032984	protein-containing complex disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0033500	carbohydrate homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0033673	negative regulation of kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0033762	response to glucagon	IEP	Predict GO terms from Neighborhoods
BP	GO:0034330	cell junction organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0034975	protein folding in endoplasmic reticulum	IEP	Predict GO terms from Neighborhoods
BP	GO:0035265	organ growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0036503	ERAD pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0042326	negative regulation of phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0042593	glucose homeostasis	IEP	Predict GO terms from Neighborhoods
CC	GO:0042645	mitochondrial nucleoid	IEP	Predict GO terms from Neighborhoods
BP	GO:0043065	positive regulation of apoptotic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043122	regulation of I-kappaB kinase/NF-kappaB signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0043124	negative regulation of I-kappaB kinase/NF-kappaB signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0043154	negative regulation of cysteine-type endopeptidase activity involved in apoptotic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0043233	organelle lumen	IEP	Predict GO terms from Neighborhoods
BP	GO:0043280	positive regulation of cysteine-type endopeptidase activity involved in apoptotic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043281	regulation of cysteine-type endopeptidase activity involved in apoptotic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043433	negative regulation of DNA-binding transcription factor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043434	response to peptide hormone	IEP	Predict GO terms from Neighborhoods
CC	GO:0045275	respiratory chain complex III	IEP	Predict GO terms from Neighborhoods
BP	GO:0045824	negative regulation of innate immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0045861	negative regulation of proteolysis	IEP	Predict GO terms from Neighborhoods
BP	GO:0045936	negative regulation of phosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046324	regulation of glucose import	IEP	Predict GO terms from Neighborhoods
BP	GO:0046365	monosaccharide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0050777	negative regulation of immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0050808	synapse organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0050821	protein stabilization	IEP	Predict GO terms from Neighborhoods
MF	GO:0051059	NF-kappaB binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051084	'de novo' post-translational protein folding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051085	chaperone cofactor-dependent protein refolding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051090	regulation of DNA-binding transcription factor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0051117	ATPase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051247	positive regulation of protein metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051345	positive regulation of hydrolase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051346	negative regulation of hydrolase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051348	negative regulation of transferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0051787	misfolded protein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0052547	regulation of peptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0052548	regulation of endopeptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0060330	regulation of response to interferon-gamma	IEP	Predict GO terms from Neighborhoods
BP	GO:0060331	negative regulation of response to interferon-gamma	IEP	Predict GO terms from Neighborhoods
BP	GO:0060334	regulation of interferon-gamma-mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0060336	negative regulation of interferon-gamma-mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0060759	regulation of response to cytokine stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0060761	negative regulation of response to cytokine stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0061077	chaperone-mediated protein folding	IEP	Predict GO terms from Neighborhoods
CC	GO:0070013	intracellular organelle lumen	IEP	Predict GO terms from Neighborhoods
CC	GO:0071458	integral component of cytoplasmic side of endoplasmic reticulum membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0071782	endoplasmic reticulum tubular network	IEP	Predict GO terms from Neighborhoods
BP	GO:0071786	endoplasmic reticulum tubular network organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0098562	cytoplasmic side of membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0098798	mitochondrial protein-containing complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0098803	respiratory chain complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0098827	endoplasmic reticulum subcompartment	IEP	Predict GO terms from Neighborhoods
MF	GO:0106137	IkappaB kinase complex binding	IEP	Predict GO terms from Neighborhoods
CC	GO:1902495	transmembrane transporter complex	IEP	Predict GO terms from Neighborhoods
BP	GO:1902600	proton transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1903320	regulation of protein modification by small protein conjugation or removal	IEP	Predict GO terms from Neighborhoods
BP	GO:1903322	positive regulation of protein modification by small protein conjugation or removal	IEP	Predict GO terms from Neighborhoods
CC	GO:1990204	oxidoreductase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:1990351	transporter complex	IEP	Predict GO terms from Neighborhoods
BP	GO:2000116	regulation of cysteine-type endopeptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:2000117	negative regulation of cysteine-type endopeptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:2001056	positive regulation of cysteine-type endopeptidase activity	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR006369	Protohaem_IX_farnesylTrfase	97	373
IPR000537	UbiA_prenyltransferase	112	359

External Links

No external refs found!

SOLTUB.AGRIA.G00000003147

Expression Profile

Co-expression Networks

Functional Annotation