SOLTUB.AGRIA.G00000030991

Description : Iron-sulfur clusters transporter atm1, mitochondrial

Gene families : OG_02_0020787 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000030991
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_88

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	None	Extended
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005524	ATP binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005743	mitochondrial inner membrane	IEA	AHRD
BP	GO:0006777	Mo-molybdopterin cofactor biosynthetic process	IEA	AHRD
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0006826	iron ion transport	None	Extended
BP	GO:0006873	cellular ion homeostasis	None	Extended
BP	GO:0006875	cellular metal ion homeostasis	None	Extended
BP	GO:0006879	cellular iron ion homeostasis	IEA	AHRD
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
CC	GO:0009526	plastid envelope	None	Extended
BP	GO:0009555	pollen development	IEA	AHRD
BP	GO:0009657	plastid organization	None	Extended
BP	GO:0009658	chloroplast organization	IEA	AHRD
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009890	negative regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
CC	GO:0009941	chloroplast envelope	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0010288	response to lead ion	IEA	AHRD
BP	GO:0010312	detoxification of zinc ion	IEA	AHRD
BP	GO:0010380	regulation of chlorophyll biosynthetic process	IEA	AHRD
MF	GO:0015232	heme transmembrane transporter activity	IEA	AHRD
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	None	Extended
CC	GO:0016021	integral component of membrane	IEA	AHRD
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019720	Mo-molybdopterin cofactor metabolic process	None	Extended
BP	GO:0019725	cellular homeostasis	None	Extended
CC	GO:0019866	organelle inner membrane	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
BP	GO:0030003	cellular cation homeostasis	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
BP	GO:0031154	culmination involved in sorocarp development	IEA	AHRD
CC	GO:0031224	intrinsic component of membrane	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
CC	GO:0031966	mitochondrial membrane	None	Extended
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031975	envelope	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034220	ion transmembrane transport	None	Extended
BP	GO:0034755	iron ion transmembrane transport	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
BP	GO:0042762	regulation of sulfur metabolic process	None	Extended
MF	GO:0042802	identical protein binding	None	Extended
MF	GO:0042803	protein homodimerization activity	IEA	AHRD
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043545	molybdopterin cofactor metabolic process	None	Extended
BP	GO:0044087	regulation of cellular component biogenesis	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046686	response to cadmium ion	IEA	AHRD
BP	GO:0046916	cellular transition metal ion homeostasis	None	Extended
MF	GO:0046983	protein dimerization activity	None	Extended
BP	GO:0048229	gametophyte development	None	Extended
BP	GO:0048364	root development	IEA	AHRD
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050790	regulation of catalytic activity	IEA	AHRD
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050801	ion homeostasis	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051130	positive regulation of cellular component organization	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051176	positive regulation of sulfur metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051189	prosthetic group metabolic process	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051276	chromosome organization	IEA	AHRD
BP	GO:0051703	biological process involved in intraspecies interaction between organisms	None	Extended
BP	GO:0055065	metal ion homeostasis	None	Extended
BP	GO:0055072	iron ion homeostasis	None	Extended
BP	GO:0055076	transition metal ion homeostasis	None	Extended
BP	GO:0055080	cation homeostasis	None	Extended
BP	GO:0055082	cellular chemical homeostasis	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0070453	regulation of heme biosynthetic process	None	Extended
BP	GO:0070455	positive regulation of heme biosynthetic process	IEA	AHRD
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090056	regulation of chlorophyll metabolic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
BP	GO:0098655	cation transmembrane transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098662	inorganic cation transmembrane transport	None	Extended
BP	GO:0098754	detoxification	None	Extended
BP	GO:0098771	inorganic ion homeostasis	None	Extended
BP	GO:0099120	socially cooperative development	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	None	Extended
BP	GO:0140466	iron-sulfur cluster export from the mitochondrion	IEA	AHRD
MF	GO:0140481	ABC-type iron-sulfur cluster transporter activity	IEA	AHRD
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901401	regulation of tetrapyrrole metabolic process	None	Extended
BP	GO:1901403	positive regulation of tetrapyrrole metabolic process	None	Extended
BP	GO:1901463	regulation of tetrapyrrole biosynthetic process	None	Extended
BP	GO:1901465	positive regulation of tetrapyrrole biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901678	iron coordination entity transport	None	Extended
BP	GO:1902497	iron-sulfur cluster transmembrane transport	None	Extended
BP	GO:1903329	regulation of iron-sulfur cluster assembly	None	Extended
BP	GO:1903331	positive regulation of iron-sulfur cluster assembly	IEA	AHRD
BP	GO:1903426	regulation of reactive oxygen species biosynthetic process	None	Extended
BP	GO:1903427	negative regulation of reactive oxygen species biosynthetic process	IEA	AHRD
BP	GO:1990542	mitochondrial transmembrane transport	None	Extended
BP	GO:1990748	cellular detoxification	IEA	AHRD
BP	GO:2000377	regulation of reactive oxygen species metabolic process	None	Extended
BP	GO:2000378	negative regulation of reactive oxygen species metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000002	mitochondrial genome maintenance	IEP	Predict GO terms from Neighborhoods
BP	GO:0000304	response to singlet oxygen	IEP	Predict GO terms from Neighborhoods
BP	GO:0000372	Group I intron splicing	IEP	Predict GO terms from Neighborhoods
BP	GO:0000373	Group II intron splicing	IEP	Predict GO terms from Neighborhoods
BP	GO:0000376	RNA splicing, via transesterification reactions with guanosine as nucleophile	IEP	Predict GO terms from Neighborhoods
MF	GO:0003678	DNA helicase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004176	ATP-dependent peptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004222	metalloendopeptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005244	voltage-gated ion channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005247	voltage-gated chloride channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005253	anion channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005254	chloride channel activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005739	mitochondrion	IEP	Predict GO terms from Neighborhoods
CC	GO:0005741	mitochondrial outer membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0005811	lipid droplet	IEP	Predict GO terms from Neighborhoods
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006206	pyrimidine nucleobase metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006208	pyrimidine nucleobase catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006212	uracil catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006397	mRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0006654	phosphatidic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006805	xenobiotic metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006821	chloride transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006898	receptor-mediated endocytosis	IEP	Predict GO terms from Neighborhoods
MF	GO:0008237	metallopeptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008308	voltage-gated anion channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008378	galactosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0008380	RNA splicing	IEP	Predict GO terms from Neighborhoods
MF	GO:0008422	beta-glucosidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009112	nucleobase metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009268	response to pH	IEP	Predict GO terms from Neighborhoods
CC	GO:0009507	chloroplast	IEP	Predict GO terms from Neighborhoods
CC	GO:0009527	plastid outer membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0009532	plastid stroma	IEP	Predict GO terms from Neighborhoods
CC	GO:0009536	plastid	IEP	Predict GO terms from Neighborhoods
BP	GO:0009662	etioplast organization	IEP	Predict GO terms from Neighborhoods
MF	GO:0009671	nitrate:proton symporter activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0009707	chloroplast outer membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0010020	chloroplast fission	IEP	Predict GO terms from Neighborhoods
BP	GO:0010239	chloroplast mRNA processing	IEP	Predict GO terms from Neighborhoods
MF	GO:0015108	chloride transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015112	nitrate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015294	solute:cation symporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015295	solute:proton symporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015296	anion:cation symporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015513	high-affinity secondary active nitrite transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015706	nitrate transmembrane transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0015926	glucosidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016070	RNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016071	mRNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016108	tetraterpenoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016109	tetraterpenoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016116	carotenoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016117	carotenoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016307	phosphatidylinositol phosphate kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016308	1-phosphatidylinositol-4-phosphate 5-kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	Predict GO terms from Neighborhoods
MF	GO:0016822	hydrolase activity, acting on acid carbon-carbon bonds	IEP	Predict GO terms from Neighborhoods
MF	GO:0016823	hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances	IEP	Predict GO terms from Neighborhoods
MF	GO:0016859	cis-trans isomerase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0018771	2-hydroxy-6-oxonona-2,4-dienedioate hydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0018774	2,6-dioxo-6-phenylhexa-3-enoate hydrolase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0018962	3-phenylpropionate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019380	3-phenylpropionate catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019740	nitrogen utilization	IEP	Predict GO terms from Neighborhoods
BP	GO:0019860	uracil metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0019867	outer membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0022832	voltage-gated channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0022836	gated channel activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0031312	extrinsic component of organelle membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031350	intrinsic component of plastid membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031351	integral component of plastid membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031354	intrinsic component of plastid outer membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031355	integral component of plastid outer membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031358	intrinsic component of chloroplast outer membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031359	integral component of chloroplast outer membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0031426	polycistronic mRNA processing	IEP	Predict GO terms from Neighborhoods
CC	GO:0031968	organelle outer membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031969	chloroplast membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0034614	cellular response to reactive oxygen species	IEP	Predict GO terms from Neighborhoods
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0034702	ion channel complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0034707	chloride channel complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0035452	extrinsic component of plastid membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0042170	plastid membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0042171	lysophosphatidic acid acyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042178	xenobiotic catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043572	plastid fission	IEP	Predict GO terms from Neighborhoods
BP	GO:0044238	primary metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045824	negative regulation of innate immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0046113	nucleobase catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046473	phosphatidic acid metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0046480	galactolipid galactosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0046608	carotenoid isomerase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0047658	alpha-amino-acid esterase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0052823	2-hydroxy-6-oxonona-2,4,7-trienedioate hydrolase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0071452	cellular response to singlet oxygen	IEP	Predict GO terms from Neighborhoods
MF	GO:0071617	lysophospholipid acyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0072529	pyrimidine-containing compound catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0072583	clathrin-dependent endocytosis	IEP	Predict GO terms from Neighborhoods
MF	GO:0080079	cellobiose glucosidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0090304	nucleic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090615	mitochondrial mRNA processing	IEP	Predict GO terms from Neighborhoods
MF	GO:0102996	beta,beta digalactosyldiacylglycerol galactosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0140040	mitochondrial polycistronic RNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:1902025	nitrate import	IEP	Predict GO terms from Neighborhoods
BP	GO:1902476	chloride transmembrane transport	IEP	Predict GO terms from Neighborhoods
CC	GO:1902495	transmembrane transporter complex	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	145	433
IPR036640	ABC1_TM_sf	139	459
IPR027417	P-loop_NTPase	473	715
IPR003439	ABC_transporter-like_ATP-bd	496	645

External Links

No external refs found!

SOLTUB.AGRIA.G00000030991

Expression Profile

Co-expression Networks

Functional Annotation