SOLTUB.AGRIA.G00000032339


Description : F-box/RNI-like superfamily protein


Gene families : OG_02_0000597 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000032339
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_122


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000177 cytoplasmic exosome (RNase complex) IEP Predict GO terms from Neighborhoods
CC GO:0000178 exosome (RNase complex) IEP Predict GO terms from Neighborhoods
CC GO:0000262 mitochondrial chromosome IEP Predict GO terms from Neighborhoods
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0000740 nuclear membrane fusion IEP Predict GO terms from Neighborhoods
BP GO:0000741 karyogamy IEP Predict GO terms from Neighborhoods
BP GO:0000957 mitochondrial RNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0000958 mitochondrial mRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0000960 regulation of mitochondrial RNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0000962 positive regulation of mitochondrial RNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0000965 mitochondrial RNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0001410 chlamydospore formation IEP Predict GO terms from Neighborhoods
BP GO:0001522 pseudouridine synthesis IEP Predict GO terms from Neighborhoods
BP GO:0001889 liver development IEP Predict GO terms from Neighborhoods
BP GO:0001893 maternal placenta development IEP Predict GO terms from Neighborhoods
MF GO:0003724 RNA helicase activity IEP Predict GO terms from Neighborhoods
MF GO:0003725 double-stranded RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0005215 transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0005703 polytene chromosome puff IEP Predict GO terms from Neighborhoods
CC GO:0005741 mitochondrial outer membrane IEP Predict GO terms from Neighborhoods
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP Predict GO terms from Neighborhoods
CC GO:0005765 lysosomal membrane IEP Predict GO terms from Neighborhoods
CC GO:0005778 peroxisomal membrane IEP Predict GO terms from Neighborhoods
CC GO:0005844 polysome IEP Predict GO terms from Neighborhoods
CC GO:0005849 mRNA cleavage factor complex IEP Predict GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006378 mRNA polyadenylation IEP Predict GO terms from Neighborhoods
BP GO:0006379 mRNA cleavage IEP Predict GO terms from Neighborhoods
BP GO:0006399 tRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006417 regulation of translation IEP Predict GO terms from Neighborhoods
BP GO:0006458 'de novo' protein folding IEP Predict GO terms from Neighborhoods
BP GO:0006810 transport IEP Predict GO terms from Neighborhoods
BP GO:0006839 mitochondrial transport IEP Predict GO terms from Neighborhoods
BP GO:0006862 nucleotide transport IEP Predict GO terms from Neighborhoods
BP GO:0006915 apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0007040 lysosome organization IEP Predict GO terms from Neighborhoods
BP GO:0007041 lysosomal transport IEP Predict GO terms from Neighborhoods
BP GO:0007276 gamete generation IEP Predict GO terms from Neighborhoods
BP GO:0007292 female gamete generation IEP Predict GO terms from Neighborhoods
BP GO:0007349 cellularization IEP Predict GO terms from Neighborhoods
BP GO:0007416 synapse assembly IEP Predict GO terms from Neighborhoods
BP GO:0007528 neuromuscular junction development IEP Predict GO terms from Neighborhoods
BP GO:0007617 mating behavior IEP Predict GO terms from Neighborhoods
BP GO:0007619 courtship behavior IEP Predict GO terms from Neighborhoods
BP GO:0008033 tRNA processing IEP Predict GO terms from Neighborhoods
MF GO:0008187 poly-pyrimidine tract binding IEP Predict GO terms from Neighborhoods
MF GO:0008266 poly(U) RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0008320 protein transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0008333 endosome to lysosome transport IEP Predict GO terms from Neighborhoods
BP GO:0008347 glial cell migration IEP Predict GO terms from Neighborhoods
BP GO:0008582 regulation of synaptic assembly at neuromuscular junction IEP Predict GO terms from Neighborhoods
BP GO:0009060 aerobic respiration IEP Predict GO terms from Neighborhoods
BP GO:0009268 response to pH IEP Predict GO terms from Neighborhoods
CC GO:0009514 glyoxysome IEP Predict GO terms from Neighborhoods
BP GO:0009558 embryo sac cellularization IEP Predict GO terms from Neighborhoods
BP GO:0009561 megagametogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009886 post-embryonic animal morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009893 positive regulation of metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009939 positive regulation of gibberellic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0009982 pseudouridine synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0010001 glial cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0010197 polar nucleus fusion IEP Predict GO terms from Neighborhoods
BP GO:0010198 synergid death IEP Predict GO terms from Neighborhoods
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010570 regulation of filamentous growth IEP Predict GO terms from Neighborhoods
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010608 post-transcriptional regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010623 programmed cell death involved in cell development IEP Predict GO terms from Neighborhoods
BP GO:0010628 positive regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010629 negative regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010632 regulation of epithelial cell migration IEP Predict GO terms from Neighborhoods
BP GO:0010634 positive regulation of epithelial cell migration IEP Predict GO terms from Neighborhoods
BP GO:0010929 positive regulation of auxin mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010954 positive regulation of protein processing IEP Predict GO terms from Neighborhoods
BP GO:0012501 programmed cell death IEP Predict GO terms from Neighborhoods
MF GO:0015203 polyamine transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015215 nucleotide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015695 organic cation transport IEP Predict GO terms from Neighborhoods
BP GO:0015839 cadaverine transport IEP Predict GO terms from Neighborhoods
BP GO:0015846 polyamine transport IEP Predict GO terms from Neighborhoods
BP GO:0015865 purine nucleotide transport IEP Predict GO terms from Neighborhoods
BP GO:0015868 purine ribonucleotide transport IEP Predict GO terms from Neighborhoods
BP GO:0015931 nucleobase-containing compound transport IEP Predict GO terms from Neighborhoods
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0016021 integral component of membrane IEP Predict GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0016592 mediator complex IEP Predict GO terms from Neighborhoods
MF GO:0016866 intramolecular transferase activity IEP Predict GO terms from Neighborhoods
BP GO:0019098 reproductive behavior IEP Predict GO terms from Neighborhoods
BP GO:0019954 asexual reproduction IEP Predict GO terms from Neighborhoods
MF GO:0022857 transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0022884 macromolecule transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0030150 protein import into mitochondrial matrix IEP Predict GO terms from Neighborhoods
MF GO:0030371 translation repressor activity IEP Predict GO terms from Neighborhoods
BP GO:0030435 sporulation resulting in formation of a cellular spore IEP Predict GO terms from Neighborhoods
BP GO:0030436 asexual sporulation IEP Predict GO terms from Neighborhoods
BP GO:0030447 filamentous growth IEP Predict GO terms from Neighborhoods
BP GO:0030510 regulation of BMP signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0030514 negative regulation of BMP signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0031123 RNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0031124 mRNA 3'-end processing IEP Predict GO terms from Neighborhoods
CC GO:0031224 intrinsic component of membrane IEP Predict GO terms from Neighborhoods
CC GO:0031304 intrinsic component of mitochondrial inner membrane IEP Predict GO terms from Neighborhoods
CC GO:0031305 integral component of mitochondrial inner membrane IEP Predict GO terms from Neighborhoods
CC GO:0031902 late endosome membrane IEP Predict GO terms from Neighborhoods
CC GO:0031903 microbody membrane IEP Predict GO terms from Neighborhoods
BP GO:0032392 DNA geometric change IEP Predict GO terms from Neighborhoods
BP GO:0032508 DNA duplex unwinding IEP Predict GO terms from Neighborhoods
CC GO:0032592 integral component of mitochondrial membrane IEP Predict GO terms from Neighborhoods
BP GO:0033120 positive regulation of RNA splicing IEP Predict GO terms from Neighborhoods
MF GO:0034046 poly(G) binding IEP Predict GO terms from Neighborhoods
BP GO:0034248 regulation of cellular amide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034329 cell junction assembly IEP Predict GO terms from Neighborhoods
MF GO:0034458 3'-5' RNA helicase activity IEP Predict GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0035193 larval central nervous system remodeling IEP Predict GO terms from Neighborhoods
MF GO:0035613 RNA stem-loop binding IEP Predict GO terms from Neighborhoods
BP GO:0035945 mitochondrial ncRNA surveillance IEP Predict GO terms from Neighborhoods
BP GO:0035946 mitochondrial mRNA surveillance IEP Predict GO terms from Neighborhoods
BP GO:0036177 filamentous growth of a population of unicellular organisms in response to pH IEP Predict GO terms from Neighborhoods
BP GO:0036180 filamentous growth of a population of unicellular organisms in response to biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0036187 cell growth mode switching, budding to filamentous IEP Predict GO terms from Neighborhoods
BP GO:0042026 protein refolding IEP Predict GO terms from Neighborhoods
BP GO:0042710 biofilm formation IEP Predict GO terms from Neighborhoods
BP GO:0042981 regulation of apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043132 NAD transport IEP Predict GO terms from Neighborhoods
CC GO:0043186 P granule IEP Predict GO terms from Neighborhoods
BP GO:0043631 RNA polyadenylation IEP Predict GO terms from Neighborhoods
BP GO:0043936 asexual sporulation resulting in formation of a cellular spore IEP Predict GO terms from Neighborhoods
BP GO:0044010 single-species biofilm formation IEP Predict GO terms from Neighborhoods
BP GO:0044011 single-species biofilm formation on inanimate substrate IEP Predict GO terms from Neighborhoods
BP GO:0044182 filamentous growth of a population of unicellular organisms IEP Predict GO terms from Neighborhoods
BP GO:0044375 regulation of peroxisome size IEP Predict GO terms from Neighborhoods
BP GO:0044528 regulation of mitochondrial mRNA stability IEP Predict GO terms from Neighborhoods
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Predict GO terms from Neighborhoods
CC GO:0045025 mitochondrial degradosome IEP Predict GO terms from Neighborhoods
BP GO:0045476 nurse cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0045477 regulation of nurse cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0045727 positive regulation of translation IEP Predict GO terms from Neighborhoods
BP GO:0045924 regulation of female receptivity IEP Predict GO terms from Neighborhoods
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0047484 regulation of response to osmotic stress IEP Predict GO terms from Neighborhoods
BP GO:0048026 positive regulation of mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0048468 cell development IEP Predict GO terms from Neighborhoods
BP GO:0048477 oogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048488 synaptic vesicle endocytosis IEP Predict GO terms from Neighborhoods
BP GO:0048864 stem cell development IEP Predict GO terms from Neighborhoods
BP GO:0048869 cellular developmental process IEP Predict GO terms from Neighborhoods
BP GO:0050685 positive regulation of mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0050807 regulation of synapse organization IEP Predict GO terms from Neighborhoods
BP GO:0050808 synapse organization IEP Predict GO terms from Neighborhoods
MF GO:0051032 nucleic acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0051033 RNA transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0051084 'de novo' post-translational protein folding IEP Predict GO terms from Neighborhoods
BP GO:0051085 chaperone cofactor-dependent protein refolding IEP Predict GO terms from Neighborhoods
BP GO:0051124 synaptic assembly at neuromuscular junction IEP Predict GO terms from Neighborhoods
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051179 localization IEP Predict GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Predict GO terms from Neighborhoods
BP GO:0051246 regulation of protein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051247 positive regulation of protein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051254 positive regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051503 adenine nucleotide transport IEP Predict GO terms from Neighborhoods
BP GO:0051963 regulation of synapse assembly IEP Predict GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0060135 maternal process involved in female pregnancy IEP Predict GO terms from Neighborhoods
BP GO:0060180 female mating behavior IEP Predict GO terms from Neighborhoods
BP GO:0061025 membrane fusion IEP Predict GO terms from Neighborhoods
BP GO:0062125 regulation of mitochondrial gene expression IEP Predict GO terms from Neighborhoods
BP GO:0065002 intracellular protein transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0070129 regulation of mitochondrial translation IEP Predict GO terms from Neighborhoods
BP GO:0070131 positive regulation of mitochondrial translation IEP Predict GO terms from Neighborhoods
BP GO:0070584 mitochondrion morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0070585 protein localization to mitochondrion IEP Predict GO terms from Neighborhoods
BP GO:0070613 regulation of protein processing IEP Predict GO terms from Neighborhoods
MF GO:0070717 poly-purine tract binding IEP Predict GO terms from Neighborhoods
BP GO:0070784 regulation of growth of unicellular organism as a thread of attached cells IEP Predict GO terms from Neighborhoods
BP GO:0070827 obsolete chromatin maintenance IEP Predict GO terms from Neighborhoods
BP GO:0071025 RNA surveillance IEP Predict GO terms from Neighborhoods
BP GO:0071026 cytoplasmic RNA surveillance IEP Predict GO terms from Neighborhoods
BP GO:0071467 cellular response to pH IEP Predict GO terms from Neighborhoods
BP GO:0071702 organic substance transport IEP Predict GO terms from Neighborhoods
BP GO:0071705 nitrogen compound transport IEP Predict GO terms from Neighborhoods
BP GO:0071763 nuclear membrane organization IEP Predict GO terms from Neighborhoods
BP GO:0072396 response to cell cycle checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0072402 response to DNA integrity checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0072423 response to DNA damage checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0072655 establishment of protein localization to mitochondrion IEP Predict GO terms from Neighborhoods
BP GO:0080036 regulation of cytokinin-activated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0080038 positive regulation of cytokinin-activated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0080171 lytic vacuole organization IEP Predict GO terms from Neighborhoods
BP GO:0090092 regulation of transmembrane receptor protein serine/threonine kinase signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0090101 negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0090174 organelle membrane fusion IEP Predict GO terms from Neighborhoods
BP GO:0090287 regulation of cellular response to growth factor stimulus IEP Predict GO terms from Neighborhoods
BP GO:0090288 negative regulation of cellular response to growth factor stimulus IEP Predict GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090605 submerged biofilm formation IEP Predict GO terms from Neighborhoods
BP GO:0090609 single-species submerged biofilm formation IEP Predict GO terms from Neighborhoods
BP GO:0090615 mitochondrial mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0090616 mitochondrial mRNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0090646 mitochondrial tRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0097222 mitochondrial mRNA polyadenylation IEP Predict GO terms from Neighborhoods
CC GO:0098573 intrinsic component of mitochondrial membrane IEP Predict GO terms from Neighborhoods
BP GO:0098630 aggregation of unicellular organisms IEP Predict GO terms from Neighborhoods
BP GO:0098743 cell aggregation IEP Predict GO terms from Neighborhoods
BP GO:0098787 mRNA cleavage involved in mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0098789 pre-mRNA cleavage required for polyadenylation IEP Predict GO terms from Neighborhoods
CC GO:0098798 mitochondrial protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:0099003 vesicle-mediated transport in synapse IEP Predict GO terms from Neighborhoods
BP GO:0140238 presynaptic endocytosis IEP Predict GO terms from Neighborhoods
MF GO:0140318 protein transporter activity IEP Predict GO terms from Neighborhoods
BP GO:1900428 regulation of filamentous growth of a population of unicellular organisms IEP Predict GO terms from Neighborhoods
BP GO:1901000 regulation of response to salt stress IEP Predict GO terms from Neighborhoods
BP GO:1901679 nucleotide transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1901888 regulation of cell junction assembly IEP Predict GO terms from Neighborhoods
BP GO:1902047 polyamine transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1902742 apoptotic process involved in development IEP Predict GO terms from Neighborhoods
BP GO:1903311 regulation of mRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903317 regulation of protein maturation IEP Predict GO terms from Neighborhoods
BP GO:1903319 positive regulation of protein maturation IEP Predict GO terms from Neighborhoods
BP GO:1903684 regulation of border follicle cell migration IEP Predict GO terms from Neighborhoods
BP GO:1903688 positive regulation of border follicle cell migration IEP Predict GO terms from Neighborhoods
BP GO:1904396 regulation of neuromuscular junction development IEP Predict GO terms from Neighborhoods
BP GO:1904748 regulation of apoptotic process involved in development IEP Predict GO terms from Neighborhoods
CC GO:1905354 exoribonuclease complex IEP Predict GO terms from Neighborhoods
CC GO:1990124 messenger ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
BP GO:1990542 mitochondrial transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:2000070 regulation of response to water deprivation IEP Predict GO terms from Neighborhoods
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2000827 mitochondrial RNA surveillance IEP Predict GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!