Description : RNA-binding (RRM/RBD/RNP motifs) family protein
Gene families : OG_02_0020878 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000032496 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_159 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000018 | regulation of DNA recombination | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000166 | nucleotide binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000303 | response to superoxide | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000305 | response to oxygen radical | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000313 | organellar ribosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000910 | cytokinesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000911 | cytokinesis by cell plate formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001522 | pseudouridine synthesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001817 | regulation of cytokine production | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001818 | negative regulation of cytokine production | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003676 | nucleic acid binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003730 | mRNA 3'-UTR binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003743 | translation initiation factor activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003924 | GTPase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003950 | NAD+ ADP-ribosyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005635 | nuclear envelope | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005700 | polytene chromosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005759 | mitochondrial matrix | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005840 | ribosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005844 | polysome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005851 | eukaryotic translation initiation factor 2B complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006140 | regulation of nucleotide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006282 | regulation of DNA repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006284 | base-excision repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006303 | double-strand break repair via nonhomologous end joining | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006304 | DNA modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006400 | tRNA modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006413 | translational initiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006417 | regulation of translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006446 | regulation of translational initiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006471 | protein ADP-ribosylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006997 | nucleus organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007417 | central nervous system development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007507 | heart development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007596 | blood coagulation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007599 | hemostasis | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008022 | protein C-terminus binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008143 | poly(A) binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008187 | poly-pyrimidine tract binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008266 | poly(U) RNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008494 | translation activator activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010468 | regulation of gene expression | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0010494 | cytoplasmic stress granule | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010569 | regulation of double-strand break repair via homologous recombination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010608 | post-transcriptional regulation of gene expression | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010611 | regulation of cardiac muscle hypertrophy | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010613 | positive regulation of cardiac muscle hypertrophy | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0014742 | positive regulation of muscle hypertrophy | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0014743 | regulation of muscle hypertrophy | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016763 | pentosyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016866 | intramolecular transferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018200 | peptidyl-glutamic acid modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018312 | peptidyl-serine ADP-ribosylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018424 | peptidyl-glutamic acid poly-ADP-ribosylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019222 | regulation of metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0022008 | neurogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0022402 | cell cycle process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030425 | dendrite | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030534 | adult behavior | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030592 | DNA ADP-ribosylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030695 | GTPase regulator activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030808 | regulation of nucleotide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030809 | negative regulation of nucleotide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031119 | tRNA pseudouridine synthesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031123 | RNA 3'-end processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031124 | mRNA 3'-end processing | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031252 | cell leading edge | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0031369 | translation initiation factor binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0031370 | eukaryotic initiation factor 4G binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0031491 | nucleosome binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031974 | membrane-enclosed lumen | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032042 | mitochondrial DNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032204 | regulation of telomere maintenance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032205 | negative regulation of telomere maintenance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032660 | regulation of interleukin-17 production | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032700 | negative regulation of interleukin-17 production | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032868 | response to insulin | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032869 | cellular response to insulin stimulus | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032993 | protein-DNA complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034248 | regulation of cellular amide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034614 | cellular response to reactive oxygen species | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034644 | cellular response to UV | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035079 | polytene chromosome puffing | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0035861 | site of double-strand break | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0036094 | small molecule binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0040009 | regulation of growth rate | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043233 | organelle lumen | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043434 | response to peptide hormone | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043488 | regulation of mRNA stability | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043489 | RNA stabilization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043502 | regulation of muscle adaptation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043504 | mitochondrial DNA repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044057 | regulation of system process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045069 | regulation of viral genome replication | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045070 | positive regulation of viral genome replication | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0045182 | translation regulator activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045739 | positive regulation of DNA repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045911 | positive regulation of DNA recombination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045934 | negative regulation of nucleobase-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045980 | negative regulation of nucleotide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046034 | ATP metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0046332 | SMAD binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0047485 | protein N-terminus binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048148 | behavioral response to cocaine | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048255 | mRNA stabilization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048481 | plant ovule development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048513 | animal organ development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048524 | positive regulation of viral process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048856 | anatomical structure development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050792 | regulation of viral process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050817 | coagulation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050878 | regulation of body fluid levels | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050879 | multicellular organismal movement | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050881 | musculoskeletal movement | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050882 | voluntary musculoskeletal movement | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050905 | neuromuscular process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051053 | negative regulation of DNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051287 | NAD binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060211 | regulation of nuclear-transcribed mRNA poly(A) tail shortening | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060212 | negative regulation of nuclear-transcribed mRNA poly(A) tail shortening | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060213 | positive regulation of nuclear-transcribed mRNA poly(A) tail shortening | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061014 | positive regulation of mRNA catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0062014 | negative regulation of small molecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0070013 | intracellular organelle lumen | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070212 | protein poly-ADP-ribosylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070213 | protein auto-ADP-ribosylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070717 | poly-purine tract binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070848 | response to growth factor | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071013 | catalytic step 2 spliceosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071014 | post-mRNA release spliceosomal complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071363 | cellular response to growth factor stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071375 | cellular response to peptide hormone stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071450 | cellular response to oxygen radical | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071451 | cellular response to superoxide | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071559 | response to transforming growth factor beta | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071560 | cellular response to transforming growth factor beta stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090257 | regulation of muscle system process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0090734 | site of DNA damage | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097190 | apoptotic signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097191 | extrinsic apoptotic signaling pathway | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0106029 | tRNA pseudouridine synthase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140294 | NAD DNA ADP-ribosyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900151 | regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900152 | negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900153 | positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900371 | regulation of purine nucleotide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900372 | negative regulation of purine nucleotide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900542 | regulation of purine nucleotide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900543 | negative regulation of purine nucleotide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901214 | regulation of neuron death | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901653 | cellular response to peptide | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902369 | negative regulation of RNA catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902373 | negative regulation of mRNA catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903312 | negative regulation of mRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903313 | positive regulation of mRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903516 | regulation of single strand break repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903518 | positive regulation of single strand break repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903578 | regulation of ATP metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903579 | negative regulation of ATP metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903900 | regulation of viral life cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904356 | regulation of telomere maintenance via telomere lengthening | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904357 | negative regulation of telomere maintenance via telomere lengthening | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905168 | positive regulation of double-strand break repair via homologous recombination | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1990124 | messenger ribonucleoprotein complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1990404 | NAD+-protein ADP-ribosyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990966 | ATP generation from poly-ADP-D-ribose | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000622 | regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000623 | negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000779 | regulation of double-strand break repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000781 | positive regulation of double-strand break repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001022 | positive regulation of response to DNA damage stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001169 | regulation of ATP biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001170 | negative regulation of ATP biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001251 | negative regulation of chromosome organization | IEP | Predict GO terms from Neighborhoods |
| No external refs found! |