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  5. SOLTUB.AGRIA.G00000034931

SOLTUB.AGRIA.G00000034931


Description : DUF538 family protein (Protein of unknown function, DUF538)


Gene families : OG_02_0001947 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000034931
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_37

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000035274 No alias transmembrane protein, putative (Protein of unknown... 0.05 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000035274 No alias transmembrane protein, putative (Protein of unknown... 0.05 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000035274 No alias transmembrane protein, putative (Protein of unknown... 0.05 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source
BP GO:0008150 biological_process IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000001 mitochondrion inheritance IEP Predict GO terms from Neighborhoods
BP GO:0001731 formation of translation preinitiation complex IEP Predict GO terms from Neighborhoods
BP GO:0002119 nematode larval development IEP Predict GO terms from Neighborhoods
BP GO:0002164 larval development IEP Predict GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Predict GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0004596 peptide alpha-N-acetyltransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0005789 endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
CC GO:0005793 endoplasmic reticulum-Golgi intermediate compartment IEP Predict GO terms from Neighborhoods
CC GO:0005798 Golgi-associated vesicle IEP Predict GO terms from Neighborhoods
CC GO:0005801 cis-Golgi network IEP Predict GO terms from Neighborhoods
BP GO:0006474 N-terminal protein amino acid acetylation IEP Predict GO terms from Neighborhoods
BP GO:0006886 intracellular protein transport IEP Predict GO terms from Neighborhoods
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Predict GO terms from Neighborhoods
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Predict GO terms from Neighborhoods
BP GO:0006900 vesicle budding from membrane IEP Predict GO terms from Neighborhoods
BP GO:0006996 organelle organization IEP Predict GO terms from Neighborhoods
BP GO:0007030 Golgi organization IEP Predict GO terms from Neighborhoods
BP GO:0007275 multicellular organism development IEP Predict GO terms from Neighborhoods
MF GO:0008080 N-acetyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0008104 protein localization IEP Predict GO terms from Neighborhoods
BP GO:0015031 protein transport IEP Predict GO terms from Neighborhoods
BP GO:0016192 vesicle-mediated transport IEP Predict GO terms from Neighborhoods
MF GO:0016410 N-acyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0017196 N-terminal peptidyl-methionine acetylation IEP Predict GO terms from Neighborhoods
BP GO:0018206 peptidyl-methionine modification IEP Predict GO terms from Neighborhoods
CC GO:0030117 membrane coat IEP Predict GO terms from Neighborhoods
CC GO:0030120 vesicle coat IEP Predict GO terms from Neighborhoods
CC GO:0030126 COPI vesicle coat IEP Predict GO terms from Neighborhoods
CC GO:0030133 transport vesicle IEP Predict GO terms from Neighborhoods
CC GO:0030134 COPII-coated ER to Golgi transport vesicle IEP Predict GO terms from Neighborhoods
CC GO:0030135 coated vesicle IEP Predict GO terms from Neighborhoods
CC GO:0030173 integral component of Golgi membrane IEP Predict GO terms from Neighborhoods
BP GO:0030433 ubiquitin-dependent ERAD pathway IEP Predict GO terms from Neighborhoods
CC GO:0030667 secretory granule membrane IEP Predict GO terms from Neighborhoods
CC GO:0031228 intrinsic component of Golgi membrane IEP Predict GO terms from Neighborhoods
CC GO:0031248 protein acetyltransferase complex IEP Predict GO terms from Neighborhoods
BP GO:0031365 N-terminal protein amino acid modification IEP Predict GO terms from Neighborhoods
CC GO:0031414 N-terminal protein acetyltransferase complex IEP Predict GO terms from Neighborhoods
CC GO:0031415 NatA complex IEP Predict GO terms from Neighborhoods
CC GO:0031416 NatB complex IEP Predict GO terms from Neighborhoods
CC GO:0031981 nuclear lumen IEP Predict GO terms from Neighborhoods
BP GO:0032790 ribosome disassembly IEP Predict GO terms from Neighborhoods
BP GO:0032956 regulation of actin cytoskeleton organization IEP Predict GO terms from Neighborhoods
BP GO:0033036 macromolecule localization IEP Predict GO terms from Neighborhoods
MF GO:0034212 peptide N-acetyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0035964 COPI-coated vesicle budding IEP Predict GO terms from Neighborhoods
BP GO:0036503 ERAD pathway IEP Predict GO terms from Neighborhoods
BP GO:0040024 dauer larval development IEP Predict GO terms from Neighborhoods
BP GO:0043181 vacuolar sequestering IEP Predict GO terms from Neighborhoods
BP GO:0043182 vacuolar sequestering of sodium ion IEP Predict GO terms from Neighborhoods
BP GO:0045184 establishment of protein localization IEP Predict GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Predict GO terms from Neighborhoods
BP GO:0048193 Golgi vesicle transport IEP Predict GO terms from Neighborhoods
BP GO:0048308 organelle inheritance IEP Predict GO terms from Neighborhoods
BP GO:0048311 mitochondrion distribution IEP Predict GO terms from Neighborhoods
BP GO:0048599 oocyte development IEP Predict GO terms from Neighborhoods
BP GO:0051053 negative regulation of DNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051179 localization IEP Predict GO terms from Neighborhoods
BP GO:0051641 cellular localization IEP Predict GO terms from Neighborhoods
BP GO:0051646 mitochondrion localization IEP Predict GO terms from Neighborhoods
BP GO:0051651 maintenance of location in cell IEP Predict GO terms from Neighborhoods
BP GO:0060260 regulation of transcription initiation by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0060261 positive regulation of transcription initiation by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0060395 SMAD protein signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0070727 cellular macromolecule localization IEP Predict GO terms from Neighborhoods
BP GO:0071702 organic substance transport IEP Predict GO terms from Neighborhoods
BP GO:0071705 nitrogen compound transport IEP Predict GO terms from Neighborhoods
BP GO:0075522 IRES-dependent viral translational initiation IEP Predict GO terms from Neighborhoods
BP GO:1901998 toxin transport IEP Predict GO terms from Neighborhoods
CC GO:1902493 acetyltransferase complex IEP Predict GO terms from Neighborhoods
BP GO:1902991 regulation of amyloid precursor protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903008 organelle disassembly IEP Predict GO terms from Neighborhoods
BP GO:2000142 regulation of DNA-templated transcription initiation IEP Predict GO terms from Neighborhoods
BP GO:2000144 positive regulation of DNA-templated transcription initiation IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR007493 DUF538 56 159
IPR036758 At5g01610-like 2 169
No external refs found!