SOLTUB.AGRIA.G00000035078

Description : GRAS protein

Gene families : OG_02_0000768 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000035078
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_161

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0000910	cytokinesis	None	Extended
MF	GO:0000976	transcription cis-regulatory region binding	IEA	AHRD
MF	GO:0001067	transcription regulatory region nucleic acid binding	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
BP	GO:0003008	system process	None	Extended
BP	GO:0003013	circulatory system process	None	Extended
BP	GO:0003018	vascular process in circulatory system	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003682	chromatin binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	AHRD
MF	GO:0003712	transcription coregulator activity	None	Extended
MF	GO:0003713	transcription coactivator activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006808	regulation of nitrogen utilization	IEA	AHRD
BP	GO:0006810	transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0006972	hyperosmotic response	None	Extended
BP	GO:0007154	cell communication	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009267	cellular response to starvation	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009608	response to symbiont	None	Extended
BP	GO:0009610	response to symbiotic fungus	IEA	AHRD
BP	GO:0009620	response to fungus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009639	response to red or far red light	None	Extended
BP	GO:0009651	response to salt stress	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009723	response to ethylene	IEA	AHRD
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	IEA	AHRD
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009826	unidimensional cell growth	None	Extended
BP	GO:0009863	salicylic acid mediated signaling pathway	IEA	AHRD
BP	GO:0009867	jasmonic acid mediated signaling pathway	IEA	AHRD
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009894	regulation of catabolic process	None	Extended
BP	GO:0009937	regulation of gibberellic acid mediated signaling pathway	None	Extended
BP	GO:0009938	negative regulation of gibberellic acid mediated signaling pathway	IEA	AHRD
BP	GO:0009939	positive regulation of gibberellic acid mediated signaling pathway	IEA	AHRD
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0009967	positive regulation of signal transduction	None	Extended
BP	GO:0009968	negative regulation of signal transduction	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
BP	GO:0010029	regulation of seed germination	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010187	negative regulation of seed germination	IEA	AHRD
BP	GO:0010218	response to far red light	IEA	AHRD
BP	GO:0010232	vascular transport	None	Extended
BP	GO:0010233	phloem transport	IEA	AHRD
BP	GO:0010336	gibberellic acid homeostasis	IEA	AHRD
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010469	regulation of signaling receptor activity	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010628	positive regulation of gene expression	IEA	AHRD
BP	GO:0010629	negative regulation of gene expression	IEA	AHRD
BP	GO:0010646	regulation of cell communication	None	Extended
BP	GO:0010647	positive regulation of cell communication	None	Extended
BP	GO:0010648	negative regulation of cell communication	None	Extended
BP	GO:0016036	cellular response to phosphate starvation	IEA	AHRD
BP	GO:0016049	cell growth	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022412	cellular process involved in reproduction in multicellular organism	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
BP	GO:0023056	positive regulation of signaling	None	Extended
BP	GO:0023057	negative regulation of signaling	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0031667	response to nutrient levels	None	Extended
BP	GO:0031668	cellular response to extracellular stimulus	None	Extended
BP	GO:0031669	cellular response to nutrient levels	None	Extended
BP	GO:0032101	regulation of response to external stimulus	None	Extended
BP	GO:0032104	regulation of response to extracellular stimulus	None	Extended
BP	GO:0032107	regulation of response to nutrient levels	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033206	meiotic cytokinesis	IEA	AHRD
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0036377	arbuscular mycorrhizal association	IEA	AHRD
BP	GO:0040007	growth	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
BP	GO:0042176	regulation of protein catabolic process	IEA	AHRD
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042538	hyperosmotic salinity response	IEA	AHRD
BP	GO:0042592	homeostatic process	None	Extended
BP	GO:0042594	response to starvation	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	None	Extended
BP	GO:0044093	positive regulation of molecular function	None	Extended
BP	GO:0044403	biological process involved in symbiotic interaction	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045595	regulation of cell differentiation	None	Extended
BP	GO:0045893	positive regulation of DNA-templated transcription	IEA	AHRD
BP	GO:0045926	negative regulation of growth	None	Extended
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0048581	negative regulation of post-embryonic development	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048584	positive regulation of response to stimulus	None	Extended
BP	GO:0048585	negative regulation of response to stimulus	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0048640	negative regulation of developmental growth	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051093	negative regulation of developmental process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051241	negative regulation of multicellular organismal process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0055088	lipid homeostasis	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0061640	cytoskeleton-dependent cytokinesis	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0071496	cellular response to external stimulus	None	Extended
BP	GO:0080050	regulation of seed development	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090378	seed trichome elongation	IEA	AHRD
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1900032	regulation of trichome patterning	None	Extended
BP	GO:1900033	negative regulation of trichome patterning	IEA	AHRD
BP	GO:1900140	regulation of seedling development	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903046	meiotic cell cycle process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1905613	regulation of developmental vegetative growth	None	Extended
BP	GO:1905614	negative regulation of developmental vegetative growth	IEA	AHRD
BP	GO:1905622	negative regulation of leaf development	IEA	AHRD
MF	GO:1990837	sequence-specific double-stranded DNA binding	None	Extended
MF	GO:1990841	promoter-specific chromatin binding	IEA	AHRD
BP	GO:2000024	regulation of leaf development	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000033	regulation of seed dormancy process	IEA	AHRD
BP	GO:2000034	regulation of seed maturation	None	Extended
BP	GO:2000241	regulation of reproductive process	None	Extended
BP	GO:2000273	positive regulation of signaling receptor activity	IEA	AHRD
BP	GO:2000377	regulation of reactive oxygen species metabolic process	IEA	AHRD
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0002215	defense response to nematode	IEP	Predict GO terms from Neighborhoods
BP	GO:0002218	activation of innate immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0002252	immune effector process	IEP	Predict GO terms from Neighborhoods
BP	GO:0002253	activation of immune response	IEP	Predict GO terms from Neighborhoods
MF	GO:0004198	calcium-dependent cysteine-type endopeptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0007029	endoplasmic reticulum organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009624	response to nematode	IEP	Predict GO terms from Neighborhoods
BP	GO:0009733	response to auxin	IEP	Predict GO terms from Neighborhoods
BP	GO:0009864	induced systemic resistance, jasmonic acid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009957	epidermal cell fate specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0010104	regulation of ethylene-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010185	regulation of cellular defense response	IEP	Predict GO terms from Neighborhoods
BP	GO:0010186	positive regulation of cellular defense response	IEP	Predict GO terms from Neighborhoods
BP	GO:0010200	response to chitin	IEP	Predict GO terms from Neighborhoods
BP	GO:0016143	S-glycoside metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019757	glycosinolate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019760	glucosinolate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045089	positive regulation of innate immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0045833	negative regulation of lipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0050776	regulation of immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0050832	defense response to fungus	IEP	Predict GO terms from Neighborhoods
BP	GO:0051055	negative regulation of lipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051301	cell division	IEP	Predict GO terms from Neighborhoods
BP	GO:0070297	regulation of phosphorelay signal transduction system	IEP	Predict GO terms from Neighborhoods
CC	GO:0071458	integral component of cytoplasmic side of endoplasmic reticulum membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0071497	cellular response to freezing	IEP	Predict GO terms from Neighborhoods
BP	GO:0071786	endoplasmic reticulum tubular network organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0090332	stomatal closure	IEP	Predict GO terms from Neighborhoods
BP	GO:0090708	specification of plant organ axis polarity	IEP	Predict GO terms from Neighborhoods
BP	GO:1900056	negative regulation of leaf senescence	IEP	Predict GO terms from Neighborhoods
BP	GO:1902531	regulation of intracellular signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:1904276	regulation of wax biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1904277	negative regulation of wax biosynthetic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR005202	TF_GRAS	189	319

External Links

No external refs found!

SOLTUB.AGRIA.G00000035078

Expression Profile

Co-expression Networks

Functional Annotation