SOLTUB.AGRIA.G00000035562

Description : nuclear factor Y, subunit A10

Gene families : OG_02_0010932 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000035562
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_15

Type	GO Term	Name	Evidence	Source
MF	GO:0000976	transcription cis-regulatory region binding	None	Extended
MF	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	None	Extended
MF	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IEA	AHRD
MF	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IEA	AHRD
MF	GO:0000987	cis-regulatory region sequence-specific DNA binding	None	Extended
MF	GO:0001067	transcription regulatory region nucleic acid binding	None	Extended
BP	GO:0001101	response to acid chemical	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005667	transcription regulator complex	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEA	AHRD
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009414	response to water deprivation	IEA	AHRD
BP	GO:0009415	response to water	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009566	fertilization	None	Extended
BP	GO:0009567	double fertilization forming a zygote and endosperm	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009637	response to blue light	None	Extended
BP	GO:0009738	abscisic acid-activated signaling pathway	IEA	AHRD
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009785	blue light signaling pathway	IEA	AHRD
BP	GO:0009790	embryo development	None	Extended
BP	GO:0009793	embryo development ending in seed dormancy	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009890	negative regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010262	somatic embryogenesis	IEA	AHRD
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
CC	GO:0016602	CCAAT-binding factor complex	IEA	AHRD
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0030522	intracellular receptor signaling pathway	None	Extended
BP	GO:0031099	regeneration	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031327	negative regulation of cellular biosynthetic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0040034	regulation of development, heterochronic	None	Extended
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0043565	sequence-specific DNA binding	None	Extended
BP	GO:0045892	negative regulation of DNA-templated transcription	IEA	AHRD
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0048506	regulation of timing of meristematic phase transition	None	Extended
BP	GO:0048509	regulation of meristem development	None	Extended
BP	GO:0048510	regulation of timing of transition from vegetative to reproductive phase	IEA	AHRD
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051253	negative regulation of RNA metabolic process	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0055046	microgametogenesis	IEA	AHRD
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071214	cellular response to abiotic stimulus	None	Extended
BP	GO:0071478	cellular response to radiation	None	Extended
BP	GO:0071482	cellular response to light stimulus	None	Extended
BP	GO:0071483	cellular response to blue light	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0090575	RNA polymerase II transcription regulator complex	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0104004	cellular response to environmental stimulus	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902679	negative regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903507	negative regulation of nucleic acid-templated transcription	None	Extended
MF	GO:1990837	sequence-specific double-stranded DNA binding	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000150	DNA strand exchange activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0000708	meiotic strand invasion	IEP	Predict GO terms from Neighborhoods
BP	GO:0000709	meiotic joint molecule formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0000722	telomere maintenance via recombination	IEP	Predict GO terms from Neighborhoods
BP	GO:0000730	DNA recombinase assembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0000800	lateral element	IEP	Predict GO terms from Neighborhoods
BP	GO:0001541	ovarian follicle development	IEP	Predict GO terms from Neighborhoods
BP	GO:0001556	oocyte maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:0001666	response to hypoxia	IEP	Predict GO terms from Neighborhoods
BP	GO:0002474	antigen processing and presentation of peptide antigen via MHC class I	IEP	Predict GO terms from Neighborhoods
BP	GO:0002478	antigen processing and presentation of exogenous peptide antigen	IEP	Predict GO terms from Neighborhoods
BP	GO:0002495	antigen processing and presentation of peptide antigen via MHC class II	IEP	Predict GO terms from Neighborhoods
BP	GO:0002504	antigen processing and presentation of peptide or polysaccharide antigen via MHC class II	IEP	Predict GO terms from Neighborhoods
MF	GO:0003712	transcription coregulator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004617	phosphoglycerate dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004766	spermidine synthase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005795	Golgi stack	IEP	Predict GO terms from Neighborhoods
BP	GO:0006268	DNA unwinding involved in DNA replication	IEP	Predict GO terms from Neighborhoods
BP	GO:0006311	meiotic gene conversion	IEP	Predict GO terms from Neighborhoods
BP	GO:0006312	mitotic recombination	IEP	Predict GO terms from Neighborhoods
BP	GO:0006595	polyamine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006596	polyamine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006597	spermine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006873	cellular ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006875	cellular metal ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006878	cellular copper ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0007127	meiosis I	IEP	Predict GO terms from Neighborhoods
BP	GO:0007130	synaptonemal complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0007141	male meiosis I	IEP	Predict GO terms from Neighborhoods
BP	GO:0007286	spermatid development	IEP	Predict GO terms from Neighborhoods
BP	GO:0008215	spermine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0008216	spermidine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0008295	spermidine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009408	response to heat	IEP	Predict GO terms from Neighborhoods
BP	GO:0009445	putrescine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009446	putrescine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009648	photoperiodism	IEP	Predict GO terms from Neighborhoods
BP	GO:0009788	negative regulation of abscisic acid-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009791	post-embryonic development	IEP	Predict GO terms from Neighborhoods
BP	GO:0009893	positive regulation of metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009968	negative regulation of signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0010099	regulation of photomorphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010100	negative regulation of photomorphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010109	regulation of photosynthesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010117	photoprotection	IEP	Predict GO terms from Neighborhoods
BP	GO:0010200	response to chitin	IEP	Predict GO terms from Neighborhoods
BP	GO:0010243	response to organonitrogen compound	IEP	Predict GO terms from Neighborhoods
BP	GO:0010286	heat acclimation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010483	pollen tube reception	IEP	Predict GO terms from Neighborhoods
BP	GO:0010569	regulation of double-strand break repair via homologous recombination	IEP	Predict GO terms from Neighborhoods
BP	GO:0010648	negative regulation of cell communication	IEP	Predict GO terms from Neighborhoods
BP	GO:0010774	meiotic strand invasion involved in reciprocal meiotic recombination	IEP	Predict GO terms from Neighborhoods
BP	GO:0010833	telomere maintenance via telomere lengthening	IEP	Predict GO terms from Neighborhoods
CC	GO:0016605	PML body	IEP	Predict GO terms from Neighborhoods
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Predict GO terms from Neighborhoods
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016768	spermine synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0017116	single-stranded DNA helicase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0018933	nicotine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019882	antigen processing and presentation	IEP	Predict GO terms from Neighborhoods
BP	GO:0019884	antigen processing and presentation of exogenous antigen	IEP	Predict GO terms from Neighborhoods
BP	GO:0019886	antigen processing and presentation of exogenous peptide antigen via MHC class II	IEP	Predict GO terms from Neighborhoods
BP	GO:0023057	negative regulation of signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0030003	cellular cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030007	cellular potassium ion homeostasis	IEP	Predict GO terms from Neighborhoods
MF	GO:0030750	putrescine N-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0030957	Tat protein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0031297	replication fork processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0032268	regulation of cellular protein metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034605	cellular response to heat	IEP	Predict GO terms from Neighborhoods
BP	GO:0034620	cellular response to unfolded protein	IEP	Predict GO terms from Neighborhoods
BP	GO:0035822	gene conversion	IEP	Predict GO terms from Neighborhoods
BP	GO:0035825	homologous recombination	IEP	Predict GO terms from Neighborhoods
CC	GO:0035861	site of double-strand break	IEP	Predict GO terms from Neighborhoods
BP	GO:0035967	cellular response to topologically incorrect protein	IEP	Predict GO terms from Neighborhoods
BP	GO:0036293	response to decreased oxygen levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0036294	cellular response to decreased oxygen levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0036297	interstrand cross-link repair	IEP	Predict GO terms from Neighborhoods
MF	GO:0042030	ATPase inhibitor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042148	strand invasion	IEP	Predict GO terms from Neighborhoods
BP	GO:0042179	nicotine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042590	antigen processing and presentation of exogenous peptide antigen via MHC class I	IEP	Predict GO terms from Neighborhoods
MF	GO:0042937	tripeptide transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0043680	filiform apparatus	IEP	Predict GO terms from Neighborhoods
BP	GO:0043971	histone H3-K18 acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045005	DNA-templated DNA replication maintenance of fidelity	IEP	Predict GO terms from Neighborhoods
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048002	antigen processing and presentation of peptide antigen	IEP	Predict GO terms from Neighborhoods
BP	GO:0048145	regulation of fibroblast proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048147	negative regulation of fibroblast proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048518	positive regulation of biological process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048573	photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:0048582	positive regulation of post-embryonic development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048583	regulation of response to stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0048584	positive regulation of response to stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0048585	negative regulation of response to stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0051026	chiasma assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0051052	regulation of DNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051054	positive regulation of DNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051105	regulation of DNA ligation	IEP	Predict GO terms from Neighborhoods
BP	GO:0051106	positive regulation of DNA ligation	IEP	Predict GO terms from Neighborhoods
BP	GO:0055070	copper ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055073	cadmium ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0061687	detoxification of inorganic compound	IEP	Predict GO terms from Neighborhoods
MF	GO:0070182	DNA polymerase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0070193	synaptonemal complex organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0070370	cellular heat acclimation	IEP	Predict GO terms from Neighborhoods
BP	GO:0070482	response to oxygen levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0071312	cellular response to alkaloid	IEP	Predict GO terms from Neighborhoods
BP	GO:0071453	cellular response to oxygen levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0071454	cellular response to anoxia	IEP	Predict GO terms from Neighborhoods
BP	GO:0071456	cellular response to hypoxia	IEP	Predict GO terms from Neighborhoods
BP	GO:0071479	cellular response to ionizing radiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0071497	cellular response to freezing	IEP	Predict GO terms from Neighborhoods
BP	GO:0071585	detoxification of cadmium ion	IEP	Predict GO terms from Neighborhoods
MF	GO:0071916	dipeptide transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0072710	response to hydroxyurea	IEP	Predict GO terms from Neighborhoods
BP	GO:0072711	cellular response to hydroxyurea	IEP	Predict GO terms from Neighborhoods
BP	GO:0072757	cellular response to camptothecin	IEP	Predict GO terms from Neighborhoods
MF	GO:0080054	low-affinity nitrate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0080167	response to karrikin	IEP	Predict GO terms from Neighborhoods
BP	GO:0090351	seedling development	IEP	Predict GO terms from Neighborhoods
BP	GO:0090408	phloem nitrate loading	IEP	Predict GO terms from Neighborhoods
MF	GO:0090448	glucosinolate:proton symporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0090449	phloem glucosinolate loading	IEP	Predict GO terms from Neighborhoods
CC	GO:0090734	site of DNA damage	IEP	Predict GO terms from Neighborhoods
BP	GO:0090735	DNA repair complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0110126	phloem loading	IEP	Predict GO terms from Neighborhoods
MF	GO:0140678	molecular function inhibitor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1900424	regulation of defense response to bacterium	IEP	Predict GO terms from Neighborhoods
BP	GO:1900426	positive regulation of defense response to bacterium	IEP	Predict GO terms from Neighborhoods
BP	GO:1900457	regulation of brassinosteroid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:1900458	negative regulation of brassinosteroid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:1901349	glucosinolate transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1901420	negative regulation of response to alcohol	IEP	Predict GO terms from Neighborhoods
BP	GO:1901535	regulation of DNA demethylation	IEP	Predict GO terms from Neighborhoods
BP	GO:1901537	positive regulation of DNA demethylation	IEP	Predict GO terms from Neighborhoods
BP	GO:1901563	response to camptothecin	IEP	Predict GO terms from Neighborhoods
BP	GO:1901698	response to nitrogen compound	IEP	Predict GO terms from Neighborhoods
BP	GO:1902446	regulation of shade avoidance	IEP	Predict GO terms from Neighborhoods
BP	GO:1902448	positive regulation of shade avoidance	IEP	Predict GO terms from Neighborhoods
BP	GO:1905157	positive regulation of photosynthesis	IEP	Predict GO terms from Neighborhoods
MF	GO:1905334	Swi5-Sfr1 complex binding	IEP	Predict GO terms from Neighborhoods
BP	GO:1905958	negative regulation of cellular response to alcohol	IEP	Predict GO terms from Neighborhoods
BP	GO:1990414	replication-born double-strand break repair via sister chromatid exchange	IEP	Predict GO terms from Neighborhoods
BP	GO:2000030	regulation of response to red or far red light	IEP	Predict GO terms from Neighborhoods
BP	GO:2000306	positive regulation of photomorphogenesis	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001289	NFYA	4	32

External Links

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SOLTUB.AGRIA.G00000035562

Expression Profile

Co-expression Networks

Functional Annotation