SOLTUB.AGRIA.G00000036421


Description : Transmembrane amino acid transporter family protein


Gene families : OG_02_0017103 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000036421
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_256


Type GO Term Name Evidence Source
CC GO:0000324 fungal-type vacuole IEA AHRD
BP GO:0000387 spliceosomal snRNP assembly IEA AHRD
BP GO:0000481 maturation of 5S rRNA IEA AHRD
MF GO:0005515 protein binding IEA AHRD
CC GO:0005730 nucleolus IEA AHRD
CC GO:0005774 vacuolar membrane IEA AHRD
CC GO:0005794 Golgi apparatus IEA AHRD
CC GO:0005829 cytosol IEA AHRD
CC GO:0005886 plasma membrane IEA AHRD
BP GO:0006865 amino acid transport IEA AHRD
CC GO:0009570 chloroplast stroma IEA AHRD
BP GO:0009908 flower development IEA AHRD
BP GO:0009933 meristem structural organization IEA AHRD
BP GO:0010087 phloem or xylem histogenesis IEA AHRD
BP GO:0010305 leaf vascular tissue pattern formation IEA AHRD
BP GO:0010588 cotyledon vascular tissue pattern formation IEA AHRD
CC GO:0015030 Cajal body IEA AHRD
CC GO:0016021 integral component of membrane IEA AHRD
CC GO:0016607 nuclear speck IEA AHRD
CC GO:0031410 cytoplasmic vesicle IEA AHRD
CC GO:0043005 neuron projection IEA AHRD
BP GO:0045292 mRNA cis splicing, via spliceosome IEA AHRD
BP GO:0045454 cell redox homeostasis IEA AHRD
BP GO:0045585 positive regulation of cytotoxic T cell differentiation IEA AHRD
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEA AHRD
BP GO:0048528 post-embryonic root development IEA AHRD
CC GO:0071005 U2-type precatalytic spliceosome IEA AHRD
CC GO:0071013 catalytic step 2 spliceosome IEA AHRD
CC GO:0098793 presynapse IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000019 regulation of mitotic recombination IEP Predict GO terms from Neighborhoods
CC GO:0000118 histone deacetylase complex IEP Predict GO terms from Neighborhoods
BP GO:0000183 rDNA heterochromatin formation IEP Predict GO terms from Neighborhoods
BP GO:0000245 spliceosomal complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0000380 alternative mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
MF GO:0000386 second spliceosomal transesterification activity IEP Predict GO terms from Neighborhoods
BP GO:0000389 mRNA 3'-splice site recognition IEP Predict GO terms from Neighborhoods
BP GO:0000414 regulation of histone H3-K36 methylation IEP Predict GO terms from Neighborhoods
CC GO:0000785 chromatin IEP Predict GO terms from Neighborhoods
CC GO:0000791 euchromatin IEP Predict GO terms from Neighborhoods
CC GO:0000974 Prp19 complex IEP Predict GO terms from Neighborhoods
CC GO:0001650 fibrillar center IEP Predict GO terms from Neighborhoods
CC GO:0001651 dense fibrillar component IEP Predict GO terms from Neighborhoods
BP GO:0001702 gastrulation with mouth forming second IEP Predict GO terms from Neighborhoods
BP GO:0001709 cell fate determination IEP Predict GO terms from Neighborhoods
BP GO:0002164 larval development IEP Predict GO terms from Neighborhoods
BP GO:0002165 instar larval or pupal development IEP Predict GO terms from Neighborhoods
BP GO:0002168 instar larval development IEP Predict GO terms from Neighborhoods
BP GO:0002507 tolerance induction IEP Predict GO terms from Neighborhoods
BP GO:0002508 central tolerance induction IEP Predict GO terms from Neighborhoods
BP GO:0002509 central tolerance induction to self antigen IEP Predict GO terms from Neighborhoods
BP GO:0002513 tolerance induction to self antigen IEP Predict GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Predict GO terms from Neighborhoods
MF GO:0003682 chromatin binding IEP Predict GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003724 RNA helicase activity IEP Predict GO terms from Neighborhoods
MF GO:0003916 DNA topoisomerase activity IEP Predict GO terms from Neighborhoods
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP Predict GO terms from Neighborhoods
MF GO:0004386 helicase activity IEP Predict GO terms from Neighborhoods
MF GO:0004402 histone acetyltransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0005654 nucleoplasm IEP Predict GO terms from Neighborhoods
CC GO:0005700 polytene chromosome IEP Predict GO terms from Neighborhoods
CC GO:0005703 polytene chromosome puff IEP Predict GO terms from Neighborhoods
CC GO:0005847 mRNA cleavage and polyadenylation specificity factor complex IEP Predict GO terms from Neighborhoods
CC GO:0005849 mRNA cleavage factor complex IEP Predict GO terms from Neighborhoods
BP GO:0006265 DNA topological change IEP Predict GO terms from Neighborhoods
BP GO:0006271 DNA strand elongation involved in DNA replication IEP Predict GO terms from Neighborhoods
BP GO:0006325 chromatin organization IEP Predict GO terms from Neighborhoods
BP GO:0006338 chromatin remodeling IEP Predict GO terms from Neighborhoods
BP GO:0006346 DNA methylation-dependent heterochromatin formation IEP Predict GO terms from Neighborhoods
BP GO:0006354 DNA-templated transcription elongation IEP Predict GO terms from Neighborhoods
BP GO:0006368 transcription elongation by RNA polymerase II promoter IEP Predict GO terms from Neighborhoods
BP GO:0006376 mRNA splice site selection IEP Predict GO terms from Neighborhoods
BP GO:0006378 mRNA polyadenylation IEP Predict GO terms from Neighborhoods
BP GO:0006379 mRNA cleavage IEP Predict GO terms from Neighborhoods
BP GO:0006476 protein deacetylation IEP Predict GO terms from Neighborhoods
BP GO:0007063 regulation of sister chromatid cohesion IEP Predict GO terms from Neighborhoods
BP GO:0007076 mitotic chromosome condensation IEP Predict GO terms from Neighborhoods
BP GO:0007097 nuclear migration IEP Predict GO terms from Neighborhoods
BP GO:0007292 female gamete generation IEP Predict GO terms from Neighborhoods
BP GO:0007369 gastrulation IEP Predict GO terms from Neighborhoods
BP GO:0007548 sex differentiation IEP Predict GO terms from Neighborhoods
MF GO:0008080 N-acetyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008270 zinc ion binding IEP Predict GO terms from Neighborhoods
CC GO:0009295 nucleoid IEP Predict GO terms from Neighborhoods
BP GO:0009303 rRNA transcription IEP Predict GO terms from Neighborhoods
BP GO:0009653 anatomical structure morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010332 response to gamma radiation IEP Predict GO terms from Neighborhoods
MF GO:0010385 double-stranded methylated DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0010468 regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010629 negative regulation of gene expression IEP Predict GO terms from Neighborhoods
MF GO:0016278 lysine N-methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0016570 histone modification IEP Predict GO terms from Neighborhoods
BP GO:0016575 histone deacetylation IEP Predict GO terms from Neighborhoods
CC GO:0016581 NuRD complex IEP Predict GO terms from Neighborhoods
MF GO:0016922 nuclear receptor binding IEP Predict GO terms from Neighborhoods
BP GO:0017145 stem cell division IEP Predict GO terms from Neighborhoods
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019222 regulation of metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0021987 cerebral cortex development IEP Predict GO terms from Neighborhoods
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP Predict GO terms from Neighborhoods
BP GO:0022612 gland morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0022616 DNA strand elongation IEP Predict GO terms from Neighborhoods
BP GO:0030097 hemopoiesis IEP Predict GO terms from Neighborhoods
BP GO:0030261 chromosome condensation IEP Predict GO terms from Neighborhoods
MF GO:0030331 nuclear estrogen receptor binding IEP Predict GO terms from Neighborhoods
MF GO:0030628 pre-mRNA 3'-splice site binding IEP Predict GO terms from Neighborhoods
BP GO:0031017 exocrine pancreas development IEP Predict GO terms from Neighborhoods
BP GO:0031048 small non-coding RNA-dependent heterochromatin formation IEP Predict GO terms from Neighborhoods
BP GO:0031100 animal organ regeneration IEP Predict GO terms from Neighborhoods
BP GO:0031123 RNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0031124 mRNA 3'-end processing IEP Predict GO terms from Neighborhoods
CC GO:0031298 replication fork protection complex IEP Predict GO terms from Neighborhoods
BP GO:0031323 regulation of cellular metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0031490 chromatin DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0031491 nucleosome binding IEP Predict GO terms from Neighborhoods
BP GO:0031507 heterochromatin formation IEP Predict GO terms from Neighborhoods
CC GO:0031616 spindle pole centrosome IEP Predict GO terms from Neighborhoods
BP GO:0033135 regulation of peptidyl-serine phosphorylation IEP Predict GO terms from Neighborhoods
CC GO:0033698 Rpd3L complex IEP Predict GO terms from Neighborhoods
MF GO:0034212 peptide N-acetyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0034698 response to gonadotropin IEP Predict GO terms from Neighborhoods
BP GO:0034699 response to luteinizing hormone IEP Predict GO terms from Neighborhoods
BP GO:0035601 protein deacylation IEP Predict GO terms from Neighborhoods
MF GO:0036002 pre-mRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0040016 embryonic cleavage IEP Predict GO terms from Neighborhoods
BP GO:0040027 negative regulation of vulval development IEP Predict GO terms from Neighborhoods
BP GO:0040028 regulation of vulval development IEP Predict GO terms from Neighborhoods
BP GO:0040029 epigenetic regulation of gene expression IEP Predict GO terms from Neighborhoods
MF GO:0042054 histone methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0042078 germ-line stem cell division IEP Predict GO terms from Neighborhoods
CC GO:0042645 mitochondrial nucleoid IEP Predict GO terms from Neighborhoods
BP GO:0042766 obsolete nucleosome mobilization IEP Predict GO terms from Neighborhoods
MF GO:0042799 histone methyltransferase activity (H4-K20 specific) IEP Predict GO terms from Neighborhoods
MF GO:0042974 nuclear retinoic acid receptor binding IEP Predict GO terms from Neighborhoods
CC GO:0043073 germ cell nucleus IEP Predict GO terms from Neighborhoods
CC GO:0043204 perikaryon IEP Predict GO terms from Neighborhoods
BP GO:0043484 regulation of RNA splicing IEP Predict GO terms from Neighborhoods
BP GO:0043631 RNA polyadenylation IEP Predict GO terms from Neighborhoods
BP GO:0043966 histone H3 acetylation IEP Predict GO terms from Neighborhoods
BP GO:0043971 histone H3-K18 acetylation IEP Predict GO terms from Neighborhoods
BP GO:0043972 histone H3-K23 acetylation IEP Predict GO terms from Neighborhoods
BP GO:0044030 regulation of DNA methylation IEP Predict GO terms from Neighborhoods
BP GO:0044154 histone H3-K14 acetylation IEP Predict GO terms from Neighborhoods
MF GO:0044877 protein-containing complex binding IEP Predict GO terms from Neighborhoods
BP GO:0045637 regulation of myeloid cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045639 positive regulation of myeloid cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045646 regulation of erythrocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045648 positive regulation of erythrocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045814 negative regulation of gene expression, epigenetic IEP Predict GO terms from Neighborhoods
BP GO:0045875 negative regulation of sister chromatid cohesion IEP Predict GO terms from Neighborhoods
BP GO:0046578 regulation of Ras protein signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0046580 negative regulation of Ras protein signal transduction IEP Predict GO terms from Neighborhoods
MF GO:0046965 nuclear retinoid X receptor binding IEP Predict GO terms from Neighborhoods
MF GO:0046966 nuclear thyroid hormone receptor binding IEP Predict GO terms from Neighborhoods
MF GO:0046975 histone methyltransferase activity (H3-K36 specific) IEP Predict GO terms from Neighborhoods
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0048477 oogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048513 animal organ development IEP Predict GO terms from Neighborhoods
BP GO:0048534 hematopoietic or lymphoid organ development IEP Predict GO terms from Neighborhoods
BP GO:0048546 digestive tract morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048598 embryonic morphogenesis IEP Predict GO terms from Neighborhoods
MF GO:0050681 nuclear androgen receptor binding IEP Predict GO terms from Neighborhoods
BP GO:0050684 regulation of mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0051052 regulation of DNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0051058 negative regulation of small GTPase mediated signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0051101 regulation of DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051252 regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051276 chromosome organization IEP Predict GO terms from Neighborhoods
BP GO:0051301 cell division IEP Predict GO terms from Neighborhoods
BP GO:0051591 response to cAMP IEP Predict GO terms from Neighborhoods
BP GO:0051647 nucleus localization IEP Predict GO terms from Neighborhoods
BP GO:0060216 definitive hemopoiesis IEP Predict GO terms from Neighborhoods
BP GO:0060255 regulation of macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0061062 regulation of nematode larval development IEP Predict GO terms from Neighborhoods
BP GO:0061064 negative regulation of nematode larval development IEP Predict GO terms from Neighborhoods
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0070210 Rpd3L-Expanded complex IEP Predict GO terms from Neighborhoods
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predict GO terms from Neighborhoods
CC GO:0070822 Sin3-type complex IEP Predict GO terms from Neighborhoods
BP GO:0070828 heterochromatin organization IEP Predict GO terms from Neighborhoods
MF GO:0070990 snRNP binding IEP Predict GO terms from Neighborhoods
CC GO:0071006 U2-type catalytic step 1 spliceosome IEP Predict GO terms from Neighborhoods
CC GO:0071007 U2-type catalytic step 2 spliceosome IEP Predict GO terms from Neighborhoods
CC GO:0071012 catalytic step 1 spliceosome IEP Predict GO terms from Neighborhoods
CC GO:0071014 post-mRNA release spliceosomal complex IEP Predict GO terms from Neighborhoods
BP GO:0071371 cellular response to gonadotropin stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071373 cellular response to luteinizing hormone stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071375 cellular response to peptide hormone stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071922 regulation of cohesin loading IEP Predict GO terms from Neighborhoods
BP GO:0071923 negative regulation of cohesin loading IEP Predict GO terms from Neighborhoods
BP GO:0072576 liver morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0080090 regulation of primary metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0080188 gene silencing by RNA-directed DNA methylation IEP Predict GO terms from Neighborhoods
CC GO:0090545 CHD-type complex IEP Predict GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Predict GO terms from Neighborhoods
BP GO:0098732 macromolecule deacylation IEP Predict GO terms from Neighborhoods
BP GO:0098781 ncRNA transcription IEP Predict GO terms from Neighborhoods
BP GO:0098787 mRNA cleavage involved in mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0098789 pre-mRNA cleavage required for polyadenylation IEP Predict GO terms from Neighborhoods
BP GO:0120186 negative regulation of protein localization to chromatin IEP Predict GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Predict GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Predict GO terms from Neighborhoods
MF GO:0140657 ATP-dependent activity IEP Predict GO terms from Neighborhoods
BP GO:0140718 facultative heterochromatin formation IEP Predict GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Predict GO terms from Neighborhoods
BP GO:1901532 regulation of hematopoietic progenitor cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:1901534 positive regulation of hematopoietic progenitor cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:1902036 regulation of hematopoietic stem cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:1902038 positive regulation of hematopoietic stem cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:1903025 regulation of RNA polymerase II regulatory region sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
BP GO:1903311 regulation of mRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1905634 regulation of protein localization to chromatin IEP Predict GO terms from Neighborhoods
BP GO:1990089 response to nerve growth factor IEP Predict GO terms from Neighborhoods
BP GO:1990090 cellular response to nerve growth factor stimulus IEP Predict GO terms from Neighborhoods
BP GO:1990416 cellular response to brain-derived neurotrophic factor stimulus IEP Predict GO terms from Neighborhoods
CC GO:1990483 Clr6 histone deacetylase complex I'' IEP Predict GO terms from Neighborhoods
BP GO:1990823 response to leukemia inhibitory factor IEP Predict GO terms from Neighborhoods
BP GO:1990830 cellular response to leukemia inhibitory factor IEP Predict GO terms from Neighborhoods
BP GO:2000677 regulation of transcription regulatory region DNA binding IEP Predict GO terms from Neighborhoods
BP GO:2000736 regulation of stem cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:2000738 positive regulation of stem cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:2001251 negative regulation of chromosome organization IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005011 SNU66/SART1 1349 1399
IPR005011 SNU66/SART1 860 1335
IPR036249 Thioredoxin-like_sf 477 568
IPR013057 AA_transpt_TM 113 450
IPR013766 Thioredoxin_domain 486 567
No external refs found!