SOLTUB.AGRIA.G00000037361

Description : CCA-adding enzyme

Gene families : OG_02_0017215 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000037361
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_268

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
BP	GO:0001680	tRNA 3'-terminal CCA addition	IEA	AHRD
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	AHRD
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004652	polynucleotide adenylyltransferase activity	None	Extended
MF	GO:0004810	tRNA adenylyltransferase activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005759	mitochondrial matrix	IEA	AHRD
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016779	nucleotidyltransferase activity	None	Extended
BP	GO:0031123	RNA 3'-end processing	None	Extended
CC	GO:0031974	membrane-enclosed lumen	None	Extended
MF	GO:0032553	ribonucleotide binding	IEA	AHRD
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042780	tRNA 3'-end processing	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	IEA	AHRD
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043233	organelle lumen	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0052928	CTP:3'-cytidine-tRNA cytidylyltransferase activity	IEA	AHRD
MF	GO:0052929	ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity	IEA	AHRD
CC	GO:0070013	intracellular organelle lumen	None	Extended
MF	GO:0070566	adenylyltransferase activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
MF	GO:1990817	RNA adenylyltransferase activity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001541	ovarian follicle development	IEP	Predict GO terms from Neighborhoods
MF	GO:0001671	ATPase activator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0002429	immune response-activating cell surface receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0002682	regulation of immune system process	IEP	Predict GO terms from Neighborhoods
BP	GO:0002684	positive regulation of immune system process	IEP	Predict GO terms from Neighborhoods
BP	GO:0002757	immune response-activating signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0002768	immune response-regulating cell surface receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
MF	GO:0003727	single-stranded RNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003743	translation initiation factor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005654	nucleoplasm	IEP	Predict GO terms from Neighborhoods
CC	GO:0005741	mitochondrial outer membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0005743	mitochondrial inner membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0005851	eukaryotic translation initiation factor 2B complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0006413	translational initiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006457	protein folding	IEP	Predict GO terms from Neighborhoods
BP	GO:0006458	'de novo' protein folding	IEP	Predict GO terms from Neighborhoods
BP	GO:0006986	response to unfolded protein	IEP	Predict GO terms from Neighborhoods
BP	GO:0007005	mitochondrion organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007006	mitochondrial membrane organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007007	inner mitochondrial membrane organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007155	cell adhesion	IEP	Predict GO terms from Neighborhoods
BP	GO:0007272	ensheathment of neurons	IEP	Predict GO terms from Neighborhoods
MF	GO:0008135	translation factor activity, RNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0008366	axon ensheathment	IEP	Predict GO terms from Neighborhoods
BP	GO:0009266	response to temperature stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009408	response to heat	IEP	Predict GO terms from Neighborhoods
BP	GO:0009746	response to hexose	IEP	Predict GO terms from Neighborhoods
BP	GO:0009749	response to glucose	IEP	Predict GO terms from Neighborhoods
BP	GO:0010228	vegetative to reproductive phase transition of meristem	IEP	Predict GO terms from Neighborhoods
BP	GO:0014003	oligodendrocyte development	IEP	Predict GO terms from Neighborhoods
CC	GO:0019866	organelle inner membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0019867	outer membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0021766	hippocampus development	IEP	Predict GO terms from Neighborhoods
BP	GO:0021782	glial cell development	IEP	Predict GO terms from Neighborhoods
BP	GO:0030029	actin filament-based process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030036	actin cytoskeleton organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0030198	extracellular matrix organization	IEP	Predict GO terms from Neighborhoods
MF	GO:0030695	GTPase regulator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0031072	heat shock protein binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0031369	translation initiation factor binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0031966	mitochondrial membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031968	organelle outer membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0032045	guanyl-nucleotide exchange factor complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0034284	response to monosaccharide	IEP	Predict GO terms from Neighborhoods
BP	GO:0034504	protein localization to nucleus	IEP	Predict GO terms from Neighborhoods
BP	GO:0035966	response to topologically incorrect protein	IEP	Predict GO terms from Neighborhoods
BP	GO:0042026	protein refolding	IEP	Predict GO terms from Neighborhoods
BP	GO:0042407	cristae formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0042552	myelination	IEP	Predict GO terms from Neighborhoods
BP	GO:0042689	regulation of crystal cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0042691	positive regulation of crystal cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0043062	extracellular structure organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0043087	regulation of GTPase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043434	response to peptide hormone	IEP	Predict GO terms from Neighborhoods
MF	GO:0045182	translation regulator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0045610	regulation of hemocyte differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045612	positive regulation of hemocyte differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0050790	regulation of catalytic activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0050821	protein stabilization	IEP	Predict GO terms from Neighborhoods
BP	GO:0050851	antigen receptor-mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0050852	T cell receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
MF	GO:0051082	unfolded protein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051084	'de novo' post-translational protein folding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051085	chaperone cofactor-dependent protein refolding	IEP	Predict GO terms from Neighborhoods
MF	GO:0051087	chaperone binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051098	regulation of binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051099	positive regulation of binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0055122	response to very low light intensity stimulus	IEP	Predict GO terms from Neighborhoods
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0060706	cell differentiation involved in embryonic placenta development	IEP	Predict GO terms from Neighborhoods
BP	GO:0060710	chorio-allantoic fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0060715	syncytiotrophoblast cell differentiation involved in labyrinthine layer development	IEP	Predict GO terms from Neighborhoods
BP	GO:0060717	chorion development	IEP	Predict GO terms from Neighborhoods
BP	GO:0060966	regulation of gene silencing by RNA	IEP	Predict GO terms from Neighborhoods
BP	GO:0061077	chaperone-mediated protein folding	IEP	Predict GO terms from Neighborhoods
BP	GO:0065009	regulation of molecular function	IEP	Predict GO terms from Neighborhoods
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0098609	cell-cell adhesion	IEP	Predict GO terms from Neighborhoods
MF	GO:0098772	molecular function regulator activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0098798	mitochondrial protein-containing complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0140677	molecular function activator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1901535	regulation of DNA demethylation	IEP	Predict GO terms from Neighborhoods
BP	GO:1901652	response to peptide	IEP	Predict GO terms from Neighborhoods
BP	GO:1903867	extraembryonic membrane development	IEP	Predict GO terms from Neighborhoods
BP	GO:1904424	regulation of GTP binding	IEP	Predict GO terms from Neighborhoods
BP	GO:1905097	regulation of guanyl-nucleotide exchange factor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1905098	negative regulation of guanyl-nucleotide exchange factor activity	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR043519	NT_sf	82	241
IPR002646	PolA_pol_head_dom	107	244

External Links

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SOLTUB.AGRIA.G00000037361

Expression Profile

Co-expression Networks

Functional Annotation