Description : RNA binding (RRM/RBD/RNP motifs) family protein
Gene families : OG_02_0005100 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000037787 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_62 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000209 | protein polyubiquitination | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003861 | 3-isopropylmalate dehydratase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004121 | cystathionine beta-lyase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004123 | cystathionine gamma-lyase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004529 | exodeoxyribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005310 | dicarboxylic acid transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005313 | L-glutamate transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005385 | zinc ion transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005784 | Sec61 translocon complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006513 | protein monoubiquitination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006534 | cysteine metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006536 | glutamate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006541 | glutamine metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006616 | SRP-dependent cotranslational protein targeting to membrane, translocation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006766 | vitamin metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006775 | fat-soluble vitamin metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006824 | cobalt ion transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006828 | manganese ion transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006829 | zinc ion transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006877 | cellular cobalt ion homeostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007605 | sensory perception of sound | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008296 | 3'-5'-exodeoxyribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008614 | pyridoxine metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008615 | pyridoxine biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009082 | branched-chain amino acid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009086 | methionine biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009092 | homoserine metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009570 | chloroplast stroma | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009739 | response to gibberellin | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009900 | dehiscence | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009901 | anther dehiscence | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010029 | regulation of seed germination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010155 | regulation of proton transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010200 | response to chitin | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010259 | multicellular organism aging | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010966 | regulation of phosphate transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010977 | negative regulation of neuron projection development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015131 | oxaloacetate transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015139 | alpha-ketoglutarate transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015140 | malate transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015172 | acidic amino acid transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015450 | protein-transporting ATPase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015556 | C4-dicarboxylate transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015729 | oxaloacetate transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015740 | C4-dicarboxylate transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015742 | alpha-ketoglutarate transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015743 | malate transport | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016151 | nickel cation binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016289 | CoA hydrolase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016780 | phosphotransferase activity, for other substituted phosphate groups | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016829 | lyase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016840 | carbon-nitrogen lyase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016843 | amine-lyase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016895 | exodeoxyribonuclease activity, producing 5'-phosphomonoesters | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019217 | regulation of fatty acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019279 | L-methionine biosynthetic process from L-homoserine via cystathionine | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019343 | cysteine biosynthetic process via cystathionine | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019344 | cysteine biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019346 | transsulfuration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019676 | ammonia assimilation cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019740 | nitrogen utilization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019838 | growth factor binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030517 | negative regulation of axon extension | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030970 | retrograde protein transport, ER to cytosol | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031204 | post-translational protein targeting to membrane, translocation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031205 | endoplasmic reticulum Sec complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032119 | sequestering of zinc ion | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032420 | stereocilium | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032527 | protein exit from endoplasmic reticulum | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034214 | protein hexamerization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035315 | hair cell differentiation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0036381 | pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0040009 | regulation of growth rate | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042304 | regulation of fatty acid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042362 | fat-soluble vitamin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042371 | vitamin K biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042372 | phylloquinone biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042373 | vitamin K metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042374 | phylloquinone metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042490 | mechanoreceptor differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042491 | inner ear auditory receptor cell differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042631 | cellular response to water deprivation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042753 | positive regulation of circadian rhythm | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042816 | vitamin B6 metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042819 | vitamin B6 biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042822 | pyridoxal phosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042823 | pyridoxal phosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0044322 | endoplasmic reticulum quality control compartment | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044572 | [4Fe-4S] cluster assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044806 | G-quadruplex DNA unwinding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045048 | protein insertion into ER membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046967 | cytosol to endoplasmic reticulum transport | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0048408 | epidermal growth factor binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048563 | post-embryonic animal organ morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050667 | homocysteine metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050768 | negative regulation of neurogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050771 | negative regulation of axonogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050954 | sensory perception of mechanical stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051176 | positive regulation of sulfur metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051205 | protein insertion into membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051238 | sequestering of metal ion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051259 | protein complex oligomerization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051377 | mannose-ethanolamine phosphotransferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051865 | protein autoubiquitination | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051880 | G-quadruplex DNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0055068 | cobalt ion homeostasis | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0060091 | kinocilium | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060113 | inner ear receptor cell differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060118 | vestibular receptor cell development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060119 | inner ear receptor cell development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060122 | inner ear receptor cell stereocilium organization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0061522 | 1,4-dihydroxy-2-naphthoyl-CoA thioesterase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061687 | detoxification of inorganic compound | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0062039 | biofilm matrix | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0062040 | fungal biofilm matrix | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0062111 | zinc ion import into organelle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071229 | cellular response to acid chemical | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071256 | translocon complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071265 | L-methionine biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071266 | 'de novo' L-methionine biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071423 | malate transmembrane transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071462 | cellular response to water stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071577 | zinc ion transmembrane transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071585 | detoxification of cadmium ion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071816 | tail-anchored membrane protein insertion into ER membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072525 | pyridine-containing compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080140 | regulation of jasmonic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080141 | regulation of jasmonic acid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090399 | replicative senescence | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097421 | liver regeneration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097428 | protein maturation by iron-sulfur cluster transfer | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0097730 | non-motile cilium | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0097732 | 9+2 non-motile cilium | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098849 | cellular detoxification of cadmium ion | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098858 | actin-based cell projection | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0106035 | protein maturation by [4Fe-4S] cluster transfer | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0106099 | 2-keto-3-deoxy-L-rhamnonate aldolase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0140209 | zinc ion import into endoplasmic reticulum | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0140820 | cytosol to Golgi apparatus transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900140 | regulation of seedling development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901661 | quinone metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901663 | quinone biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902356 | oxaloacetate(2-) transmembrane transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903513 | endoplasmic reticulum to cytosol transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904257 | zinc ion import into Golgi lumen | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000026 | regulation of multicellular organismal development | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |