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  5. SOLTUB.AGRIA.G00000037856

SOLTUB.AGRIA.G00000037856


Description : TVP38/TMEM64 family membrane protein slr0305 family


Gene families : OG_02_0021180 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000037856
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_249


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000045 autophagosome assembly IEP Predict GO terms from Neighborhoods
CC GO:0000139 Golgi membrane IEP Predict GO terms from Neighborhoods
MF GO:0000217 DNA secondary structure binding IEP Predict GO terms from Neighborhoods
CC GO:0000329 fungal-type vacuole membrane IEP Predict GO terms from Neighborhoods
CC GO:0000421 autophagosome membrane IEP Predict GO terms from Neighborhoods
BP GO:0002832 negative regulation of response to biotic stimulus IEP Predict GO terms from Neighborhoods
MF GO:0003674 molecular_function IEP Predict GO terms from Neighborhoods
MF GO:0003680 minor groove of adenine-thymine-rich DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0004843 cysteine-type deubiquitinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004930 G protein-coupled receptor activity IEP Predict GO terms from Neighborhoods
MF GO:0005048 signal sequence binding IEP Predict GO terms from Neighborhoods
MF GO:0005488 binding IEP Predict GO terms from Neighborhoods
MF GO:0005506 iron ion binding IEP Predict GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Predict GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Predict GO terms from Neighborhoods
CC GO:0005654 nucleoplasm IEP Predict GO terms from Neighborhoods
CC GO:0005759 mitochondrial matrix IEP Predict GO terms from Neighborhoods
CC GO:0005802 trans-Golgi network IEP Predict GO terms from Neighborhoods
BP GO:0006022 aminoglycan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006023 aminoglycan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006024 glycosaminoglycan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006029 proteoglycan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006518 peptide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006575 cellular modified amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006621 protein retention in ER lumen IEP Predict GO terms from Neighborhoods
BP GO:0006749 glutathione metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006787 porphyrin-containing compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006790 sulfur compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006995 cellular response to nitrogen starvation IEP Predict GO terms from Neighborhoods
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0008150 biological_process IEP Predict GO terms from Neighborhoods
MF GO:0008194 UDP-glycosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008429 phosphatidylethanolamine binding IEP Predict GO terms from Neighborhoods
BP GO:0009100 glycoprotein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009101 glycoprotein biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009888 tissue development IEP Predict GO terms from Neighborhoods
BP GO:0009960 endosperm development IEP Predict GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Predict GO terms from Neighborhoods
BP GO:0010413 glucuronoxylan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010417 glucuronoxylan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010498 proteasomal protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010508 positive regulation of autophagy IEP Predict GO terms from Neighborhoods
BP GO:0010528 regulation of transposition IEP Predict GO terms from Neighborhoods
BP GO:0010529 negative regulation of transposition IEP Predict GO terms from Neighborhoods
MF GO:0015020 glucuronosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0015994 chlorophyll metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0015996 chlorophyll catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0016020 membrane IEP Predict GO terms from Neighborhoods
CC GO:0016021 integral component of membrane IEP Predict GO terms from Neighborhoods
BP GO:0016236 macroautophagy IEP Predict GO terms from Neighborhoods
BP GO:0016239 positive regulation of macroautophagy IEP Predict GO terms from Neighborhoods
BP GO:0016241 regulation of macroautophagy IEP Predict GO terms from Neighborhoods
BP GO:0016579 protein deubiquitination IEP Predict GO terms from Neighborhoods
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predict GO terms from Neighborhoods
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predict GO terms from Neighborhoods
MF GO:0016757 glycosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016758 hexosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predict GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0019783 ubiquitin-like protein peptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0019941 modification-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0030136 clathrin-coated vesicle IEP Predict GO terms from Neighborhoods
BP GO:0030163 protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030166 proteoglycan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0030203 glycosaminoglycan metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0030276 clathrin binding IEP Predict GO terms from Neighborhoods
BP GO:0030433 ubiquitin-dependent ERAD pathway IEP Predict GO terms from Neighborhoods
BP GO:0030968 endoplasmic reticulum unfolded protein response IEP Predict GO terms from Neighborhoods
BP GO:0031057 negative regulation of histone modification IEP Predict GO terms from Neighborhoods
CC GO:0031090 organelle membrane IEP Predict GO terms from Neighborhoods
CC GO:0031224 intrinsic component of membrane IEP Predict GO terms from Neighborhoods
BP GO:0031348 negative regulation of defense response IEP Predict GO terms from Neighborhoods
CC GO:0031410 cytoplasmic vesicle IEP Predict GO terms from Neighborhoods
MF GO:0031490 chromatin DNA binding IEP Predict GO terms from Neighborhoods
CC GO:0031974 membrane-enclosed lumen IEP Predict GO terms from Neighborhoods
CC GO:0031982 vesicle IEP Predict GO terms from Neighborhoods
MF GO:0032050 clathrin heavy chain binding IEP Predict GO terms from Neighborhoods
BP GO:0032102 negative regulation of response to external stimulus IEP Predict GO terms from Neighborhoods
BP GO:0032387 negative regulation of intracellular transport IEP Predict GO terms from Neighborhoods
BP GO:0032502 developmental process IEP Predict GO terms from Neighborhoods
BP GO:0032507 maintenance of protein location in cell IEP Predict GO terms from Neighborhoods
BP GO:0033015 tetrapyrrole catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0033106 cis-Golgi network membrane IEP Predict GO terms from Neighborhoods
CC GO:0033110 Cvt vesicle membrane IEP Predict GO terms from Neighborhoods
BP GO:0033304 chlorophyll a metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033310 chlorophyll a catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034121 regulation of toll-like receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0034122 negative regulation of toll-like receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0035065 regulation of histone acetylation IEP Predict GO terms from Neighborhoods
BP GO:0035067 negative regulation of histone acetylation IEP Predict GO terms from Neighborhoods
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0035523 protein K29-linked deubiquitination IEP Predict GO terms from Neighborhoods
MF GO:0035560 pheophorbidase activity IEP Predict GO terms from Neighborhoods
BP GO:0035871 protein K11-linked deubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Predict GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Predict GO terms from Neighborhoods
CC GO:0043233 organelle lumen IEP Predict GO terms from Neighborhoods
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044260 cellular macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045185 maintenance of protein location IEP Predict GO terms from Neighborhoods
BP GO:0045492 xylan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046149 pigment catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Predict GO terms from Neighborhoods
MF GO:0046923 ER retention sequence binding IEP Predict GO terms from Neighborhoods
MF GO:0047517 1,4-beta-D-xylan synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0048102 autophagic cell death IEP Predict GO terms from Neighborhoods
BP GO:0048440 carpel development IEP Predict GO terms from Neighborhoods
BP GO:0048585 negative regulation of response to stimulus IEP Predict GO terms from Neighborhoods
MF GO:0050313 sulfur dioxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:0050654 chondroitin sulfate proteoglycan metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0051213 dioxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:0051224 negative regulation of protein transport IEP Predict GO terms from Neighborhoods
BP GO:0051570 regulation of histone H3-K9 methylation IEP Predict GO terms from Neighborhoods
BP GO:0051574 positive regulation of histone H3-K9 methylation IEP Predict GO terms from Neighborhoods
BP GO:0051603 proteolysis involved in protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051651 maintenance of location in cell IEP Predict GO terms from Neighborhoods
MF GO:0061578 Lys63-specific deubiquitinase activity IEP Predict GO terms from Neighborhoods
BP GO:0062207 regulation of pattern recognition receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0065007 biological regulation IEP Predict GO terms from Neighborhoods
CC GO:0070013 intracellular organelle lumen IEP Predict GO terms from Neighborhoods
BP GO:0070536 protein K63-linked deubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0070813 hydrogen sulfide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0070861 regulation of protein exit from endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0070862 negative regulation of protein exit from endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0070988 demethylation IEP Predict GO terms from Neighborhoods
BP GO:0071108 protein K48-linked deubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0072583 clathrin-dependent endocytosis IEP Predict GO terms from Neighborhoods
BP GO:0072595 maintenance of protein localization in organelle IEP Predict GO terms from Neighborhoods
MF GO:0080030 methyl indole-3-acetate esterase activity IEP Predict GO terms from Neighborhoods
MF GO:0080031 methyl salicylate esterase activity IEP Predict GO terms from Neighborhoods
MF GO:0080032 methyl jasmonate esterase activity IEP Predict GO terms from Neighborhoods
MF GO:0080116 glucuronoxylan glucuronosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0090317 negative regulation of intracellular protein transport IEP Predict GO terms from Neighborhoods
CC GO:0097708 intracellular vesicle IEP Predict GO terms from Neighborhoods
CC GO:0098588 bounding membrane of organelle IEP Predict GO terms from Neighborhoods
CC GO:0098791 Golgi apparatus subcompartment IEP Predict GO terms from Neighborhoods
MF GO:0101005 deubiquitinase activity IEP Predict GO terms from Neighborhoods
CC GO:0110165 cellular anatomical entity IEP Predict GO terms from Neighborhoods
BP GO:1900034 regulation of cellular response to heat IEP Predict GO terms from Neighborhoods
BP GO:1900036 positive regulation of cellular response to heat IEP Predict GO terms from Neighborhoods
BP GO:1900056 negative regulation of leaf senescence IEP Predict GO terms from Neighborhoods
BP GO:1900109 regulation of histone H3-K9 dimethylation IEP Predict GO terms from Neighborhoods
BP GO:1900111 positive regulation of histone H3-K9 dimethylation IEP Predict GO terms from Neighborhoods
BP GO:1900424 regulation of defense response to bacterium IEP Predict GO terms from Neighborhoods
BP GO:1900425 negative regulation of defense response to bacterium IEP Predict GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901565 organonitrogen compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901983 regulation of protein acetylation IEP Predict GO terms from Neighborhoods
BP GO:1901984 negative regulation of protein acetylation IEP Predict GO terms from Neighborhoods
BP GO:1903510 mucopolysaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1904152 regulation of retrograde protein transport, ER to cytosol IEP Predict GO terms from Neighborhoods
BP GO:1904153 negative regulation of retrograde protein transport, ER to cytosol IEP Predict GO terms from Neighborhoods
BP GO:1904950 negative regulation of establishment of protein localization IEP Predict GO terms from Neighborhoods
BP GO:1905037 autophagosome organization IEP Predict GO terms from Neighborhoods
BP GO:1990167 protein K27-linked deubiquitination IEP Predict GO terms from Neighborhoods
BP GO:1990168 protein K33-linked deubiquitination IEP Predict GO terms from Neighborhoods
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Predict GO terms from Neighborhoods
BP GO:2000756 regulation of peptidyl-lysine acetylation IEP Predict GO terms from Neighborhoods
BP GO:2000757 negative regulation of peptidyl-lysine acetylation IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR032816 SNARE_assoc 64 185
No external refs found!