Description : Protein SCRL10, putative
Gene families : OG_02_0003669 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000038234 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_75 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| SOLTUB.AGRIA.G00000028657 | No alias | Defensin-like protein 242 | 0.05 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000042511 | No alias | Unknown protein | 0.06 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000042512 | No alias | Unknown protein | 0.04 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000044090 | No alias | Protein SCRL10, putative | 0.02 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000028657 | No alias | Defensin-like protein 242 | 0.05 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000042511 | No alias | Unknown protein | 0.06 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000042512 | No alias | Unknown protein | 0.04 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000044090 | No alias | Protein SCRL10, putative | 0.02 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000028657 | No alias | Defensin-like protein 242 | 0.05 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000042511 | No alias | Unknown protein | 0.06 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000042512 | No alias | Unknown protein | 0.04 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000044090 | No alias | Protein SCRL10, putative | 0.02 | Orthogroups with 8 Potato genotypes |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004650 | polygalacturonase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005576 | extracellular region | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008037 | cell recognition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009856 | pollination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010047 | fruit dehiscence | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019863 | IgE binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019865 | immunoglobulin binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031225 | anchored component of membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031226 | intrinsic component of plasma membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043667 | pollen wall | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0046658 | anchored component of plasma membrane | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0047911 | galacturan 1,4-alpha-galacturonidase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048544 | recognition of pollen | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048868 | pollen tube development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060320 | rejection of self pollen | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |