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  5. SOLTUB.AGRIA.G00000038484

SOLTUB.AGRIA.G00000038484


Description : Coiled-coil domain-containing protein


Gene families : OG_02_0007059 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000038484
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_230

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000038451 No alias Coiled-coil domain-containing protein 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000038451 No alias Coiled-coil domain-containing protein 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000038451 No alias Coiled-coil domain-containing protein 0.03 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source
CC GO:0005768 endosome IEA AHRD
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predict GO terms from Neighborhoods
MF GO:0000149 SNARE binding IEP Predict GO terms from Neighborhoods
CC GO:0000331 contractile vacuole IEP Predict GO terms from Neighborhoods
BP GO:0001910 regulation of leukocyte mediated cytotoxicity IEP Predict GO terms from Neighborhoods
BP GO:0001912 positive regulation of leukocyte mediated cytotoxicity IEP Predict GO terms from Neighborhoods
BP GO:0002064 epithelial cell development IEP Predict GO terms from Neighborhoods
BP GO:0002119 nematode larval development IEP Predict GO terms from Neighborhoods
BP GO:0002164 larval development IEP Predict GO terms from Neighborhoods
BP GO:0002697 regulation of immune effector process IEP Predict GO terms from Neighborhoods
BP GO:0002699 positive regulation of immune effector process IEP Predict GO terms from Neighborhoods
BP GO:0002703 regulation of leukocyte mediated immunity IEP Predict GO terms from Neighborhoods
BP GO:0002705 positive regulation of leukocyte mediated immunity IEP Predict GO terms from Neighborhoods
BP GO:0002706 regulation of lymphocyte mediated immunity IEP Predict GO terms from Neighborhoods
BP GO:0002708 positive regulation of lymphocyte mediated immunity IEP Predict GO terms from Neighborhoods
BP GO:0002715 regulation of natural killer cell mediated immunity IEP Predict GO terms from Neighborhoods
BP GO:0002717 positive regulation of natural killer cell mediated immunity IEP Predict GO terms from Neighborhoods
MF GO:0004521 endoribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004540 ribonuclease activity IEP Predict GO terms from Neighborhoods
CC GO:0005765 lysosomal membrane IEP Predict GO terms from Neighborhoods
CC GO:0005793 endoplasmic reticulum-Golgi intermediate compartment IEP Predict GO terms from Neighborhoods
CC GO:0005798 Golgi-associated vesicle IEP Predict GO terms from Neighborhoods
CC GO:0005801 cis-Golgi network IEP Predict GO terms from Neighborhoods
CC GO:0005856 cytoskeleton IEP Predict GO terms from Neighborhoods
BP GO:0006109 regulation of carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006379 mRNA cleavage IEP Predict GO terms from Neighborhoods
BP GO:0006497 protein lipidation IEP Predict GO terms from Neighborhoods
BP GO:0006505 GPI anchor metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006506 GPI anchor biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006623 protein targeting to vacuole IEP Predict GO terms from Neighborhoods
BP GO:0006643 membrane lipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006664 glycolipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006810 transport IEP Predict GO terms from Neighborhoods
BP GO:0006884 cell volume homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0006886 intracellular protein transport IEP Predict GO terms from Neighborhoods
BP GO:0006887 exocytosis IEP Predict GO terms from Neighborhoods
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0006892 post-Golgi vesicle-mediated transport IEP Predict GO terms from Neighborhoods
BP GO:0006895 Golgi to endosome transport IEP Predict GO terms from Neighborhoods
BP GO:0006898 receptor-mediated endocytosis IEP Predict GO terms from Neighborhoods
BP GO:0006906 vesicle fusion IEP Predict GO terms from Neighborhoods
BP GO:0006915 apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0006954 inflammatory response IEP Predict GO terms from Neighborhoods
BP GO:0006971 hypotonic response IEP Predict GO terms from Neighborhoods
BP GO:0006983 ER overload response IEP Predict GO terms from Neighborhoods
BP GO:0006984 ER-nucleus signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0006990 positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response IEP Predict GO terms from Neighborhoods
BP GO:0007029 endoplasmic reticulum organization IEP Predict GO terms from Neighborhoods
BP GO:0007041 lysosomal transport IEP Predict GO terms from Neighborhoods
CC GO:0008021 synaptic vesicle IEP Predict GO terms from Neighborhoods
BP GO:0008333 endosome to lysosome transport IEP Predict GO terms from Neighborhoods
BP GO:0008356 asymmetric cell division IEP Predict GO terms from Neighborhoods
BP GO:0008361 regulation of cell size IEP Predict GO terms from Neighborhoods
BP GO:0009247 glycolipid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009992 cellular water homeostasis IEP Predict GO terms from Neighborhoods
CC GO:0010008 endosome membrane IEP Predict GO terms from Neighborhoods
BP GO:0010324 membrane invagination IEP Predict GO terms from Neighborhoods
BP GO:0010508 positive regulation of autophagy IEP Predict GO terms from Neighborhoods
CC GO:0012506 vesicle membrane IEP Predict GO terms from Neighborhoods
BP GO:0015031 protein transport IEP Predict GO terms from Neighborhoods
CC GO:0015630 microtubule cytoskeleton IEP Predict GO terms from Neighborhoods
BP GO:0016192 vesicle-mediated transport IEP Predict GO terms from Neighborhoods
BP GO:0016236 macroautophagy IEP Predict GO terms from Neighborhoods
BP GO:0016482 cytosolic transport IEP Predict GO terms from Neighborhoods
BP GO:0021515 cell differentiation in spinal cord IEP Predict GO terms from Neighborhoods
BP GO:0021522 spinal cord motor neuron differentiation IEP Predict GO terms from Neighborhoods
BP GO:0021953 central nervous system neuron differentiation IEP Predict GO terms from Neighborhoods
BP GO:0030100 regulation of endocytosis IEP Predict GO terms from Neighborhoods
BP GO:0030104 water homeostasis IEP Predict GO terms from Neighborhoods
CC GO:0030117 membrane coat IEP Predict GO terms from Neighborhoods
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predict GO terms from Neighborhoods
CC GO:0030120 vesicle coat IEP Predict GO terms from Neighborhoods
CC GO:0030121 AP-1 adaptor complex IEP Predict GO terms from Neighborhoods
CC GO:0030122 AP-2 adaptor complex IEP Predict GO terms from Neighborhoods
CC GO:0030123 AP-3 adaptor complex IEP Predict GO terms from Neighborhoods
CC GO:0030126 COPI vesicle coat IEP Predict GO terms from Neighborhoods
CC GO:0030131 clathrin adaptor complex IEP Predict GO terms from Neighborhoods
CC GO:0030133 transport vesicle IEP Predict GO terms from Neighborhoods
CC GO:0030135 coated vesicle IEP Predict GO terms from Neighborhoods
CC GO:0030136 clathrin-coated vesicle IEP Predict GO terms from Neighborhoods
BP GO:0030182 neuron differentiation IEP Predict GO terms from Neighborhoods
MF GO:0030276 clathrin binding IEP Predict GO terms from Neighborhoods
CC GO:0030659 cytoplasmic vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030667 secretory granule membrane IEP Predict GO terms from Neighborhoods
BP GO:0030707 ovarian follicle cell development IEP Predict GO terms from Neighborhoods
CC GO:0030897 HOPS complex IEP Predict GO terms from Neighborhoods
MF GO:0031072 heat shock protein binding IEP Predict GO terms from Neighborhoods
CC GO:0031312 extrinsic component of organelle membrane IEP Predict GO terms from Neighborhoods
BP GO:0031341 regulation of cell killing IEP Predict GO terms from Neighborhoods
BP GO:0031343 positive regulation of cell killing IEP Predict GO terms from Neighborhoods
BP GO:0031503 protein-containing complex localization IEP Predict GO terms from Neighborhoods
BP GO:0031623 receptor internalization IEP Predict GO terms from Neighborhoods
CC GO:0031902 late endosome membrane IEP Predict GO terms from Neighborhoods
CC GO:0032433 filopodium tip IEP Predict GO terms from Neighborhoods
BP GO:0032506 cytokinetic process IEP Predict GO terms from Neighborhoods
BP GO:0032885 regulation of polysaccharide biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:0033059 cellular pigmentation IEP Predict GO terms from Neighborhoods
BP GO:0034058 endosomal vesicle fusion IEP Predict GO terms from Neighborhoods
BP GO:0034263 positive regulation of autophagy in response to ER overload IEP Predict GO terms from Neighborhoods
MF GO:0035091 phosphatidylinositol binding IEP Predict GO terms from Neighborhoods
MF GO:0035615 clathrin adaptor activity IEP Predict GO terms from Neighborhoods
BP GO:0036003 positive regulation of transcription from RNA polymerase II promoter in response to stress IEP Predict GO terms from Neighborhoods
CC GO:0036020 endolysosome membrane IEP Predict GO terms from Neighborhoods
BP GO:0036090 cleavage furrow ingression IEP Predict GO terms from Neighborhoods
BP GO:0036289 peptidyl-serine autophosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0036290 protein trans-autophosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0042269 regulation of natural killer cell mediated cytotoxicity IEP Predict GO terms from Neighborhoods
CC GO:0042406 extrinsic component of endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
CC GO:0043230 extracellular organelle IEP Predict GO terms from Neighborhoods
BP GO:0043434 response to peptide hormone IEP Predict GO terms from Neighborhoods
BP GO:0043473 pigmentation IEP Predict GO terms from Neighborhoods
BP GO:0043618 regulation of transcription from RNA polymerase II promoter in response to stress IEP Predict GO terms from Neighborhoods
BP GO:0043620 regulation of DNA-templated transcription in response to stress IEP Predict GO terms from Neighborhoods
BP GO:0045184 establishment of protein localization IEP Predict GO terms from Neighborhoods
BP GO:0045807 positive regulation of endocytosis IEP Predict GO terms from Neighborhoods
BP GO:0045912 negative regulation of carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045954 positive regulation of natural killer cell mediated cytotoxicity IEP Predict GO terms from Neighborhoods
BP GO:0046467 membrane lipid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046488 phosphatidylinositol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Predict GO terms from Neighborhoods
BP GO:0048193 Golgi vesicle transport IEP Predict GO terms from Neighborhoods
BP GO:0048268 clathrin coat assembly IEP Predict GO terms from Neighborhoods
BP GO:0048284 organelle fusion IEP Predict GO terms from Neighborhoods
BP GO:0048468 cell development IEP Predict GO terms from Neighborhoods
BP GO:0048488 synaptic vesicle endocytosis IEP Predict GO terms from Neighborhoods
BP GO:0048489 synaptic vesicle transport IEP Predict GO terms from Neighborhoods
BP GO:0048666 neuron development IEP Predict GO terms from Neighborhoods
MF GO:0051082 unfolded protein binding IEP Predict GO terms from Neighborhoods
BP GO:0051179 localization IEP Predict GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Predict GO terms from Neighborhoods
BP GO:0051601 exocyst localization IEP Predict GO terms from Neighborhoods
BP GO:0051648 vesicle localization IEP Predict GO terms from Neighborhoods
BP GO:0051650 establishment of vesicle localization IEP Predict GO terms from Neighborhoods
BP GO:0061024 membrane organization IEP Predict GO terms from Neighborhoods
BP GO:0061025 membrane fusion IEP Predict GO terms from Neighborhoods
CC GO:0065010 extracellular membrane-bounded organelle IEP Predict GO terms from Neighborhoods
CC GO:0070062 extracellular exosome IEP Predict GO terms from Neighborhoods
CC GO:0070382 exocytic vesicle IEP Predict GO terms from Neighborhoods
BP GO:0071216 cellular response to biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0072583 clathrin-dependent endocytosis IEP Predict GO terms from Neighborhoods
BP GO:0072665 protein localization to vacuole IEP Predict GO terms from Neighborhoods
BP GO:0072666 establishment of protein localization to vacuole IEP Predict GO terms from Neighborhoods
BP GO:0090174 organelle membrane fusion IEP Predict GO terms from Neighborhoods
BP GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEP Predict GO terms from Neighborhoods
BP GO:0097479 synaptic vesicle localization IEP Predict GO terms from Neighborhoods
MF GO:0097718 disordered domain specific binding IEP Predict GO terms from Neighborhoods
CC GO:0098796 membrane protein complex IEP Predict GO terms from Neighborhoods
CC GO:0098797 plasma membrane protein complex IEP Predict GO terms from Neighborhoods
CC GO:0098852 lytic vacuole membrane IEP Predict GO terms from Neighborhoods
BP GO:0099003 vesicle-mediated transport in synapse IEP Predict GO terms from Neighborhoods
CC GO:0099023 vesicle tethering complex IEP Predict GO terms from Neighborhoods
BP GO:0099024 plasma membrane invagination IEP Predict GO terms from Neighborhoods
CC GO:0101003 ficolin-1-rich granule membrane IEP Predict GO terms from Neighborhoods
BP GO:0140238 presynaptic endocytosis IEP Predict GO terms from Neighborhoods
MF GO:0140312 cargo adaptor activity IEP Predict GO terms from Neighborhoods
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:1900101 regulation of endoplasmic reticulum unfolded protein response IEP Predict GO terms from Neighborhoods
BP GO:1900125 regulation of hyaluronan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1900126 negative regulation of hyaluronan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901522 positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus IEP Predict GO terms from Neighborhoods
BP GO:1902410 mitotic cytokinetic process IEP Predict GO terms from Neighborhoods
BP GO:1903509 liposaccharide metabolic process IEP Predict GO terms from Neighborhoods
CC GO:1903561 extracellular vesicle IEP Predict GO terms from Neighborhoods
BP GO:1903894 regulation of IRE1-mediated unfolded protein response IEP Predict GO terms from Neighborhoods
BP GO:1904576 obsolete response to tunicamycin IEP Predict GO terms from Neighborhoods
BP GO:1905897 regulation of response to endoplasmic reticulum stress IEP Predict GO terms from Neighborhoods
BP GO:1990386 mitotic cleavage furrow ingression IEP Predict GO terms from Neighborhoods
BP GO:1990440 positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress IEP Predict GO terms from Neighborhoods
CC GO:1990604 IRE1-TRAF2-ASK1 complex IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR019514 Syndetin_C 864 1093
IPR019515 VPS54_N 130 420
No external refs found!