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  5. SOLTUB.AGRIA.G00000038571

SOLTUB.AGRIA.G00000038571


Description : Protein transport protein sec24


Gene families : OG_02_0017316 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000038571
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_81


Type GO Term Name Evidence Source
MF GO:0005488 binding IEA AHRD
CC GO:0005737 cytoplasm IEA AHRD
CC GO:0012505 endomembrane system IEA AHRD
BP GO:0016192 vesicle-mediated transport IEA AHRD
CC GO:0031090 organelle membrane IEA AHRD
CC GO:0043231 intracellular membrane-bounded organelle IEA AHRD
BP GO:0046907 intracellular transport IEA AHRD
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0000033 alpha-1,3-mannosyltransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0000139 Golgi membrane IEP Predict GO terms from Neighborhoods
MF GO:0000149 SNARE binding IEP Predict GO terms from Neighborhoods
CC GO:0000322 storage vacuole IEP Predict GO terms from Neighborhoods
CC GO:0000324 fungal-type vacuole IEP Predict GO terms from Neighborhoods
BP GO:0000919 cell plate assembly IEP Predict GO terms from Neighborhoods
BP GO:0003383 apical constriction IEP Predict GO terms from Neighborhoods
BP GO:0003384 apical constriction involved in gastrulation IEP Predict GO terms from Neighborhoods
MF GO:0004427 inorganic diphosphate phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0004470 malic enzyme activity IEP Predict GO terms from Neighborhoods
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predict GO terms from Neighborhoods
MF GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity IEP Predict GO terms from Neighborhoods
MF GO:0004576 oligosaccharyl transferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0005048 signal sequence binding IEP Predict GO terms from Neighborhoods
MF GO:0005509 calcium ion binding IEP Predict GO terms from Neighborhoods
CC GO:0005768 endosome IEP Predict GO terms from Neighborhoods
CC GO:0005773 vacuole IEP Predict GO terms from Neighborhoods
CC GO:0005788 endoplasmic reticulum lumen IEP Predict GO terms from Neighborhoods
CC GO:0005790 smooth endoplasmic reticulum IEP Predict GO terms from Neighborhoods
CC GO:0005791 rough endoplasmic reticulum IEP Predict GO terms from Neighborhoods
CC GO:0005802 trans-Golgi network IEP Predict GO terms from Neighborhoods
BP GO:0006108 malate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006140 regulation of nucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006486 protein glycosylation IEP Predict GO terms from Neighborhoods
BP GO:0006487 protein N-linked glycosylation IEP Predict GO terms from Neighborhoods
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006508 proteolysis IEP Predict GO terms from Neighborhoods
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006516 glycoprotein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006623 protein targeting to vacuole IEP Predict GO terms from Neighborhoods
BP GO:0006886 intracellular protein transport IEP Predict GO terms from Neighborhoods
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0006896 Golgi to vacuole transport IEP Predict GO terms from Neighborhoods
BP GO:0007029 endoplasmic reticulum organization IEP Predict GO terms from Neighborhoods
BP GO:0007339 binding of sperm to zona pellucida IEP Predict GO terms from Neighborhoods
BP GO:0007377 germ-band extension IEP Predict GO terms from Neighborhoods
BP GO:0008037 cell recognition IEP Predict GO terms from Neighborhoods
BP GO:0008104 protein localization IEP Predict GO terms from Neighborhoods
CC GO:0008250 oligosaccharyltransferase complex IEP Predict GO terms from Neighborhoods
MF GO:0008270 zinc ion binding IEP Predict GO terms from Neighborhoods
BP GO:0009056 catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009057 macromolecule catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009100 glycoprotein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009306 protein secretion IEP Predict GO terms from Neighborhoods
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0009933 meristem structural organization IEP Predict GO terms from Neighborhoods
MF GO:0009940 amino-terminal vacuolar sorting propeptide binding IEP Predict GO terms from Neighborhoods
BP GO:0009988 cell-cell recognition IEP Predict GO terms from Neighborhoods
MF GO:0010209 vacuolar sorting signal binding IEP Predict GO terms from Neighborhoods
BP GO:0010256 endomembrane system organization IEP Predict GO terms from Neighborhoods
BP GO:0010498 proteasomal protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0015031 protein transport IEP Predict GO terms from Neighborhoods
CC GO:0016021 integral component of membrane IEP Predict GO terms from Neighborhoods
MF GO:0016615 malate dehydrogenase activity IEP Predict GO terms from Neighborhoods
MF GO:0016757 glycosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016758 hexosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0016998 cell wall macromolecule catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0017119 Golgi transport complex IEP Predict GO terms from Neighborhoods
BP GO:0018196 peptidyl-asparagine modification IEP Predict GO terms from Neighborhoods
BP GO:0018279 protein N-linked glycosylation via asparagine IEP Predict GO terms from Neighborhoods
BP GO:0019082 viral protein processing IEP Predict GO terms from Neighborhoods
BP GO:0019941 modification-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030048 actin filament-based movement IEP Predict GO terms from Neighborhoods
CC GO:0030117 membrane coat IEP Predict GO terms from Neighborhoods
CC GO:0030120 vesicle coat IEP Predict GO terms from Neighborhoods
CC GO:0030127 COPII vesicle coat IEP Predict GO terms from Neighborhoods
MF GO:0030145 manganese ion binding IEP Predict GO terms from Neighborhoods
BP GO:0030163 protein catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
BP GO:0030433 ubiquitin-dependent ERAD pathway IEP Predict GO terms from Neighborhoods
CC GO:0030662 coated vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030665 clathrin-coated vesicle membrane IEP Predict GO terms from Neighborhoods
BP GO:0030968 endoplasmic reticulum unfolded protein response IEP Predict GO terms from Neighborhoods
MF GO:0031176 endo-1,4-beta-xylanase activity IEP Predict GO terms from Neighborhoods
CC GO:0031224 intrinsic component of membrane IEP Predict GO terms from Neighborhoods
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
CC GO:0031410 cytoplasmic vesicle IEP Predict GO terms from Neighborhoods
CC GO:0031974 membrane-enclosed lumen IEP Predict GO terms from Neighborhoods
CC GO:0031982 vesicle IEP Predict GO terms from Neighborhoods
CC GO:0031984 organelle subcompartment IEP Predict GO terms from Neighborhoods
BP GO:0032507 maintenance of protein location in cell IEP Predict GO terms from Neighborhoods
CC GO:0032838 plasma membrane bounded cell projection cytoplasm IEP Predict GO terms from Neighborhoods
CC GO:0032839 dendrite cytoplasm IEP Predict GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:0033036 macromolecule localization IEP Predict GO terms from Neighborhoods
MF GO:0034185 apolipoprotein binding IEP Predict GO terms from Neighborhoods
BP GO:0034975 protein folding in endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0034976 response to endoplasmic reticulum stress IEP Predict GO terms from Neighborhoods
CC GO:0034998 oligosaccharyltransferase I complex IEP Predict GO terms from Neighborhoods
CC GO:0034999 oligosaccharyltransferase II complex IEP Predict GO terms from Neighborhoods
CC GO:0035000 oligosaccharyltransferase III complex IEP Predict GO terms from Neighborhoods
BP GO:0035036 sperm-egg recognition IEP Predict GO terms from Neighborhoods
MF GO:0035254 glutamate receptor binding IEP Predict GO terms from Neighborhoods
MF GO:0035255 ionotropic glutamate receptor binding IEP Predict GO terms from Neighborhoods
BP GO:0035459 vesicle cargo loading IEP Predict GO terms from Neighborhoods
BP GO:0035592 establishment of protein localization to extracellular region IEP Predict GO terms from Neighborhoods
BP GO:0036503 ERAD pathway IEP Predict GO terms from Neighborhoods
MF GO:0042283 dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Predict GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Predict GO terms from Neighborhoods
CC GO:0043197 dendritic spine IEP Predict GO terms from Neighborhoods
CC GO:0043233 organelle lumen IEP Predict GO terms from Neighborhoods
BP GO:0043413 macromolecule glycosylation IEP Predict GO terms from Neighborhoods
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043686 co-translational protein modification IEP Predict GO terms from Neighborhoods
BP GO:0043687 post-translational protein modification IEP Predict GO terms from Neighborhoods
MF GO:0044183 protein folding chaperone IEP Predict GO terms from Neighborhoods
CC GO:0044232 organelle membrane contact site IEP Predict GO terms from Neighborhoods
CC GO:0044233 mitochondria-associated endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
BP GO:0044248 cellular catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044260 cellular macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044265 cellular macromolecule catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0044309 neuron spine IEP Predict GO terms from Neighborhoods
CC GO:0044322 endoplasmic reticulum quality control compartment IEP Predict GO terms from Neighborhoods
BP GO:0044347 cell wall polysaccharide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045053 protein retention in Golgi apparatus IEP Predict GO terms from Neighborhoods
BP GO:0045184 establishment of protein localization IEP Predict GO terms from Neighborhoods
BP GO:0045185 maintenance of protein location IEP Predict GO terms from Neighborhoods
BP GO:0045493 xylan catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Predict GO terms from Neighborhoods
BP GO:0048193 Golgi vesicle transport IEP Predict GO terms from Neighborhoods
BP GO:0048488 synaptic vesicle endocytosis IEP Predict GO terms from Neighborhoods
MF GO:0050897 cobalt ion binding IEP Predict GO terms from Neighborhoods
BP GO:0051603 proteolysis involved in protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051651 maintenance of location in cell IEP Predict GO terms from Neighborhoods
CC GO:0070013 intracellular organelle lumen IEP Predict GO terms from Neighborhoods
BP GO:0070085 glycosylation IEP Predict GO terms from Neighborhoods
BP GO:0070252 actin-mediated cell contraction IEP Predict GO terms from Neighborhoods
MF GO:0070401 NADP+ binding IEP Predict GO terms from Neighborhoods
BP GO:0070727 cellular macromolecule localization IEP Predict GO terms from Neighborhoods
CC GO:0070971 endoplasmic reticulum exit site IEP Predict GO terms from Neighborhoods
CC GO:0071556 integral component of lumenal side of endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
BP GO:0071692 protein localization to extracellular region IEP Predict GO terms from Neighborhoods
BP GO:0071702 organic substance transport IEP Predict GO terms from Neighborhoods
BP GO:0071705 nitrogen compound transport IEP Predict GO terms from Neighborhoods
BP GO:0072359 circulatory system development IEP Predict GO terms from Neighborhoods
BP GO:0072583 clathrin-dependent endocytosis IEP Predict GO terms from Neighborhoods
BP GO:0090110 COPII-coated vesicle cargo loading IEP Predict GO terms from Neighborhoods
MF GO:0097599 xylanase activity IEP Predict GO terms from Neighborhoods
CC GO:0097708 intracellular vesicle IEP Predict GO terms from Neighborhoods
CC GO:0098588 bounding membrane of organelle IEP Predict GO terms from Neighborhoods
CC GO:0098791 Golgi apparatus subcompartment IEP Predict GO terms from Neighborhoods
CC GO:0098794 postsynapse IEP Predict GO terms from Neighborhoods
CC GO:0098796 membrane protein complex IEP Predict GO terms from Neighborhoods
CC GO:0098889 intrinsic component of presynaptic membrane IEP Predict GO terms from Neighborhoods
CC GO:0098936 intrinsic component of postsynaptic membrane IEP Predict GO terms from Neighborhoods
CC GO:0098945 intrinsic component of presynaptic active zone membrane IEP Predict GO terms from Neighborhoods
BP GO:0099003 vesicle-mediated transport in synapse IEP Predict GO terms from Neighborhoods
CC GO:0099023 vesicle tethering complex IEP Predict GO terms from Neighborhoods
CC GO:0099055 integral component of postsynaptic membrane IEP Predict GO terms from Neighborhoods
CC GO:0099056 integral component of presynaptic membrane IEP Predict GO terms from Neighborhoods
CC GO:0099059 integral component of presynaptic active zone membrane IEP Predict GO terms from Neighborhoods
CC GO:0099240 intrinsic component of synaptic membrane IEP Predict GO terms from Neighborhoods
CC GO:0099568 cytoplasmic region IEP Predict GO terms from Neighborhoods
CC GO:0099699 integral component of synaptic membrane IEP Predict GO terms from Neighborhoods
CC GO:0120111 neuron projection cytoplasm IEP Predict GO terms from Neighborhoods
BP GO:0140238 presynaptic endocytosis IEP Predict GO terms from Neighborhoods
BP GO:1901575 organic substance catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902031 regulation of NADP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902600 proton transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:2000895 hemicellulose catabolic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006896 Sec23/24_trunk_dom 119 371
IPR006900 Sec23/24_helical_dom 497 609
IPR036174 Znf_Sec23_Sec24_sf 36 109
IPR036465 vWFA_dom_sf 120 374
IPR036175 Sec23/24_helical_dom_sf 497 613
No external refs found!