SOLTUB.AGRIA.G00000038951

Description : Arogenate dehydratase

Gene families : OG_02_0017384 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000038951
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_7

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004664	prephenate dehydratase activity	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005829	cytosol	IEA	AHRD
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006558	L-phenylalanine metabolic process	None	Extended
BP	GO:0006570	tyrosine metabolic process	None	Extended
BP	GO:0006571	tyrosine biosynthetic process	IEA	AHRD
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	IEA	AHRD
BP	GO:0007623	circadian rhythm	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008652	cellular amino acid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009072	aromatic amino acid family metabolic process	None	Extended
BP	GO:0009073	aromatic amino acid family biosynthetic process	None	Extended
BP	GO:0009094	L-phenylalanine biosynthetic process	IEA	AHRD
BP	GO:0009095	aromatic amino acid family biosynthetic process, prephenate pathway	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009570	chloroplast stroma	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009637	response to blue light	None	Extended
BP	GO:0009642	response to light intensity	None	Extended
BP	GO:0009645	response to low light intensity stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010244	response to low fluence blue light stimulus by blue low-fluence system	IEA	AHRD
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016835	carbon-oxygen lyase activity	None	Extended
MF	GO:0016836	hydro-lyase activity	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
MF	GO:0047769	arogenate dehydratase activity	IEA	AHRD
BP	GO:0048511	rhythmic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080167	response to karrikin	IEA	AHRD
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended
BP	GO:1902221	erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process	None	Extended
BP	GO:1902223	erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0000165	MAPK cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0001775	cell activation	IEP	Predict GO terms from Neighborhoods
BP	GO:0001934	positive regulation of protein phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0002252	immune effector process	IEP	Predict GO terms from Neighborhoods
BP	GO:0002263	cell activation involved in immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0002274	myeloid leukocyte activation	IEP	Predict GO terms from Neighborhoods
BP	GO:0002275	myeloid cell activation involved in immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0002276	basophil activation involved in immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0002366	leukocyte activation involved in immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0002694	regulation of leukocyte activation	IEP	Predict GO terms from Neighborhoods
BP	GO:0002696	positive regulation of leukocyte activation	IEP	Predict GO terms from Neighborhoods
BP	GO:0002861	regulation of inflammatory response to antigenic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0002863	positive regulation of inflammatory response to antigenic stimulus	IEP	Predict GO terms from Neighborhoods
MF	GO:0003877	ATP adenylyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004824	lysine-tRNA ligase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005615	extracellular space	IEP	Predict GO terms from Neighborhoods
CC	GO:0005759	mitochondrial matrix	IEP	Predict GO terms from Neighborhoods
BP	GO:0006399	tRNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006430	lysyl-tRNA aminoacylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0008340	determination of adult lifespan	IEP	Predict GO terms from Neighborhoods
BP	GO:0009165	nucleotide biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009925	basal plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0010165	response to X-ray	IEP	Predict GO terms from Neighborhoods
BP	GO:0010212	response to ionizing radiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010229	inflorescence development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010562	positive regulation of phosphorus metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010600	regulation of auxin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010928	regulation of auxin mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0015959	diadenosine polyphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0015960	diadenosine polyphosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0015965	diadenosine tetraphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0015966	diadenosine tetraphosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0016324	apical plasma membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0016597	amino acid binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0016779	nucleotidyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016874	ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Predict GO terms from Neighborhoods
CC	GO:0017101	aminoacyl-tRNA synthetase multienzyme complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0019897	extrinsic component of plasma membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0019898	extrinsic component of membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031234	extrinsic component of cytoplasmic side of plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0032350	regulation of hormone metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0036230	granulocyte activation	IEP	Predict GO terms from Neighborhoods
BP	GO:0042327	positive regulation of phosphorylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0042802	identical protein binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0042803	protein homodimerization activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043030	regulation of macrophage activation	IEP	Predict GO terms from Neighborhoods
BP	GO:0043032	positive regulation of macrophage activation	IEP	Predict GO terms from Neighborhoods
BP	GO:0043038	amino acid activation	IEP	Predict GO terms from Neighborhoods
BP	GO:0043039	tRNA aminoacylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0043177	organic acid binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0044706	multi-multicellular organism process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045321	leukocyte activation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045575	basophil activation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045937	positive regulation of phosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046885	regulation of hormone biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0046983	protein dimerization activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0050727	regulation of inflammatory response	IEP	Predict GO terms from Neighborhoods
BP	GO:0050729	positive regulation of inflammatory response	IEP	Predict GO terms from Neighborhoods
BP	GO:0050865	regulation of cell activation	IEP	Predict GO terms from Neighborhoods
BP	GO:0050867	positive regulation of cell activation	IEP	Predict GO terms from Neighborhoods
BP	GO:0051258	protein polymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051302	regulation of cell division	IEP	Predict GO terms from Neighborhoods
BP	GO:0060378	regulation of brood size	IEP	Predict GO terms from Neighborhoods
BP	GO:0061062	regulation of nematode larval development	IEP	Predict GO terms from Neighborhoods
BP	GO:0061063	positive regulation of nematode larval development	IEP	Predict GO terms from Neighborhoods
BP	GO:0065001	specification of axis polarity	IEP	Predict GO terms from Neighborhoods
BP	GO:0070371	ERK1 and ERK2 cascade	IEP	Predict GO terms from Neighborhoods
MF	GO:0070566	adenylyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0090354	regulation of auxin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090708	specification of plant organ axis polarity	IEP	Predict GO terms from Neighborhoods
MF	GO:0097110	scaffold protein binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Predict GO terms from Neighborhoods
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902074	response to salt	IEP	Predict GO terms from Neighborhoods
BP	GO:1905421	regulation of plant organ morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:2000024	regulation of leaf development	IEP	Predict GO terms from Neighborhoods
BP	GO:2000067	regulation of root morphogenesis	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001086	Preph_deHydtase	111	281

External Links

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SOLTUB.AGRIA.G00000038951

Expression Profile

Co-expression Networks

Functional Annotation