SOLTUB.AGRIA.G00000039327


Description : two-component response regulator


Gene families : OG_02_0021477 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000039327
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_229


Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEA AHRD
MF GO:0003700 DNA-binding transcription factor activity IEA AHRD
CC GO:0005634 nucleus IEA AHRD
BP GO:0009414 response to water deprivation IEA AHRD
BP GO:0009787 regulation of abscisic acid-activated signaling pathway IEA AHRD
BP GO:0009873 ethylene-activated signaling pathway IEA AHRD
BP GO:0010082 regulation of root meristem growth IEA AHRD
BP GO:0010119 regulation of stomatal movement IEA AHRD
BP GO:0010150 leaf senescence IEA AHRD
BP GO:0010380 regulation of chlorophyll biosynthetic process IEA AHRD
BP GO:0010492 maintenance of shoot apical meristem identity IEA AHRD
BP GO:0031537 regulation of anthocyanin metabolic process IEA AHRD
MF GO:0042802 identical protein binding IEA AHRD
MF GO:0043565 sequence-specific DNA binding IEA AHRD
BP GO:0045893 positive regulation of DNA-templated transcription IEA AHRD
BP GO:0048576 positive regulation of short-day photoperiodism, flowering IEA AHRD
BP GO:0080022 primary root development IEA AHRD
BP GO:0080036 regulation of cytokinin-activated signaling pathway IEA AHRD
BP GO:0080113 regulation of seed growth IEA AHRD
BP GO:1990110 callus formation IEA AHRD
BP GO:2000022 regulation of jasmonic acid mediated signaling pathway IEA AHRD
BP GO:2000031 regulation of salicylic acid mediated signaling pathway IEA AHRD
Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predict GO terms from Neighborhoods
CC GO:0000151 ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
CC GO:0000152 nuclear ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
CC GO:0000306 extrinsic component of vacuolar membrane IEP Predict GO terms from Neighborhoods
CC GO:0000322 storage vacuole IEP Predict GO terms from Neighborhoods
CC GO:0000326 protein storage vacuole IEP Predict GO terms from Neighborhoods
CC GO:0000329 fungal-type vacuole membrane IEP Predict GO terms from Neighborhoods
BP GO:0000429 carbon catabolite regulation of transcription from RNA polymerase II promoter IEP Predict GO terms from Neighborhoods
BP GO:0000436 carbon catabolite activation of transcription from RNA polymerase II promoter IEP Predict GO terms from Neighborhoods
CC GO:0000803 sex chromosome IEP Predict GO terms from Neighborhoods
CC GO:0001741 XY body IEP Predict GO terms from Neighborhoods
MF GO:0003724 RNA helicase activity IEP Predict GO terms from Neighborhoods
MF GO:0004842 ubiquitin-protein transferase activity IEP Predict GO terms from Neighborhoods
CC GO:0005652 nuclear lamina IEP Predict GO terms from Neighborhoods
CC GO:0005776 autophagosome IEP Predict GO terms from Neighborhoods
CC GO:0005816 spindle pole body IEP Predict GO terms from Neighborhoods
CC GO:0005829 cytosol IEP Predict GO terms from Neighborhoods
CC GO:0005847 mRNA cleavage and polyadenylation specificity factor complex IEP Predict GO terms from Neighborhoods
CC GO:0005849 mRNA cleavage factor complex IEP Predict GO terms from Neighborhoods
CC GO:0005882 intermediate filament IEP Predict GO terms from Neighborhoods
BP GO:0006337 nucleosome disassembly IEP Predict GO terms from Neighborhoods
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006996 organelle organization IEP Predict GO terms from Neighborhoods
BP GO:0007059 chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:0007154 cell communication IEP Predict GO terms from Neighborhoods
BP GO:0007166 cell surface receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0007167 enzyme-linked receptor protein signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0007584 response to nutrient IEP Predict GO terms from Neighborhoods
BP GO:0008286 insulin receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0008589 regulation of smoothened signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009639 response to red or far red light IEP Predict GO terms from Neighborhoods
BP GO:0009641 shade avoidance IEP Predict GO terms from Neighborhoods
BP GO:0009647 skotomorphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009649 entrainment of circadian clock IEP Predict GO terms from Neighborhoods
BP GO:0009757 hexose mediated signaling IEP Predict GO terms from Neighborhoods
BP GO:0009791 post-embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0009861 jasmonic acid and ethylene-dependent systemic resistance IEP Predict GO terms from Neighborhoods
BP GO:0009894 regulation of catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009896 positive regulation of catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009991 response to extracellular stimulus IEP Predict GO terms from Neighborhoods
BP GO:0010099 regulation of photomorphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010100 negative regulation of photomorphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010218 response to far red light IEP Predict GO terms from Neighborhoods
BP GO:0010255 glucose mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010453 regulation of cell fate commitment IEP Predict GO terms from Neighborhoods
BP GO:0010455 positive regulation of cell fate commitment IEP Predict GO terms from Neighborhoods
BP GO:0010520 regulation of reciprocal meiotic recombination IEP Predict GO terms from Neighborhoods
BP GO:0010845 positive regulation of reciprocal meiotic recombination IEP Predict GO terms from Neighborhoods
BP GO:0014072 response to isoquinoline alkaloid IEP Predict GO terms from Neighborhoods
BP GO:0016043 cellular component organization IEP Predict GO terms from Neighborhoods
BP GO:0016055 Wnt signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0016236 macroautophagy IEP Predict GO terms from Neighborhoods
CC GO:0016363 nuclear matrix IEP Predict GO terms from Neighborhoods
CC GO:0016514 SWI/SNF complex IEP Predict GO terms from Neighborhoods
CC GO:0016604 nuclear body IEP Predict GO terms from Neighborhoods
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predict GO terms from Neighborhoods
BP GO:0019941 modification-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030162 regulation of proteolysis IEP Predict GO terms from Neighborhoods
BP GO:0030178 negative regulation of Wnt signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0030447 filamentous growth IEP Predict GO terms from Neighborhoods
CC GO:0030877 beta-catenin destruction complex IEP Predict GO terms from Neighborhoods
BP GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0031312 extrinsic component of organelle membrane IEP Predict GO terms from Neighborhoods
BP GO:0031329 regulation of cellular catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031331 positive regulation of cellular catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
CC GO:0031464 Cul4A-RING E3 ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
BP GO:0031494 regulation of mating type switching IEP Predict GO terms from Neighborhoods
BP GO:0031496 positive regulation of mating type switching IEP Predict GO terms from Neighborhoods
BP GO:0031667 response to nutrient levels IEP Predict GO terms from Neighborhoods
BP GO:0031668 cellular response to extracellular stimulus IEP Predict GO terms from Neighborhoods
BP GO:0031669 cellular response to nutrient levels IEP Predict GO terms from Neighborhoods
BP GO:0031670 cellular response to nutrient IEP Predict GO terms from Neighborhoods
CC GO:0032153 cell division site IEP Predict GO terms from Neighborhoods
BP GO:0032434 regulation of proteasomal ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032435 negative regulation of proteasomal ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032878 regulation of establishment or maintenance of cell polarity IEP Predict GO terms from Neighborhoods
BP GO:0032986 protein-DNA complex disassembly IEP Predict GO terms from Neighborhoods
BP GO:0033198 response to ATP IEP Predict GO terms from Neighborhoods
BP GO:0033962 P-body assembly IEP Predict GO terms from Neighborhoods
BP GO:0034063 stress granule assembly IEP Predict GO terms from Neighborhoods
BP GO:0034728 nucleosome organization IEP Predict GO terms from Neighborhoods
BP GO:0035330 regulation of hippo signaling IEP Predict GO terms from Neighborhoods
BP GO:0035331 negative regulation of hippo signaling IEP Predict GO terms from Neighborhoods
BP GO:0035567 non-canonical Wnt signaling pathway IEP Predict GO terms from Neighborhoods
CC GO:0036064 ciliary basal body IEP Predict GO terms from Neighborhoods
BP GO:0040020 regulation of meiotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0042176 regulation of protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042177 negative regulation of protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043278 response to morphine IEP Predict GO terms from Neighborhoods
BP GO:0043279 response to alkaloid IEP Predict GO terms from Neighborhoods
BP GO:0043578 nuclear matrix organization IEP Predict GO terms from Neighborhoods
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044182 filamentous growth of a population of unicellular organisms IEP Predict GO terms from Neighborhoods
CC GO:0044732 mitotic spindle pole body IEP Predict GO terms from Neighborhoods
BP GO:0045013 carbon catabolite repression of transcription IEP Predict GO terms from Neighborhoods
CC GO:0045095 keratin filament IEP Predict GO terms from Neighborhoods
BP GO:0045103 intermediate filament-based process IEP Predict GO terms from Neighborhoods
BP GO:0045104 intermediate filament cytoskeleton organization IEP Predict GO terms from Neighborhoods
BP GO:0045132 meiotic chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:0045143 homologous chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:0045732 positive regulation of protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045836 positive regulation of meiotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0045862 positive regulation of proteolysis IEP Predict GO terms from Neighborhoods
BP GO:0045879 negative regulation of smoothened signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0045880 positive regulation of smoothened signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0045911 positive regulation of DNA recombination IEP Predict GO terms from Neighborhoods
BP GO:0045990 carbon catabolite regulation of transcription IEP Predict GO terms from Neighborhoods
BP GO:0045991 carbon catabolite activation of transcription IEP Predict GO terms from Neighborhoods
BP GO:0048572 short-day photoperiodism IEP Predict GO terms from Neighborhoods
BP GO:0048575 short-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048585 negative regulation of response to stimulus IEP Predict GO terms from Neighborhoods
MF GO:0051219 phosphoprotein binding IEP Predict GO terms from Neighborhoods
BP GO:0051246 regulation of protein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051445 regulation of meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0051446 positive regulation of meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0051603 proteolysis involved in protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051785 positive regulation of nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0060069 Wnt signaling pathway, regulating spindle positioning IEP Predict GO terms from Neighborhoods
BP GO:0061136 regulation of proteasomal protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0061172 regulation of establishment of bipolar cell polarity IEP Predict GO terms from Neighborhoods
MF GO:0061630 ubiquitin protein ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predict GO terms from Neighborhoods
BP GO:0061984 catabolite repression IEP Predict GO terms from Neighborhoods
BP GO:0061985 carbon catabolite repression IEP Predict GO terms from Neighborhoods
BP GO:0070507 regulation of microtubule cytoskeleton organization IEP Predict GO terms from Neighborhoods
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predict GO terms from Neighborhoods
BP GO:0071318 cellular response to ATP IEP Predict GO terms from Neighborhoods
BP GO:0071496 cellular response to external stimulus IEP Predict GO terms from Neighborhoods
CC GO:0071564 npBAF complex IEP Predict GO terms from Neighborhoods
CC GO:0071565 nBAF complex IEP Predict GO terms from Neighborhoods
BP GO:0071840 cellular component organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0090090 negative regulation of canonical Wnt signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0097298 regulation of nucleus size IEP Predict GO terms from Neighborhoods
BP GO:0098813 nuclear chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:0106167 extracellular ATP signaling IEP Predict GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Predict GO terms from Neighborhoods
CC GO:0140535 intracellular protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:1901799 negative regulation of proteasomal protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901800 positive regulation of proteasomal protein catabolic process IEP Predict GO terms from Neighborhoods
CC GO:1902494 catalytic complex IEP Predict GO terms from Neighborhoods
BP GO:1903050 regulation of proteolysis involved in protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903051 negative regulation of proteolysis involved in protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903052 positive regulation of proteolysis involved in protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903066 regulation of protein localization to cell tip IEP Predict GO terms from Neighborhoods
BP GO:1903067 negative regulation of protein localization to cell tip IEP Predict GO terms from Neighborhoods
BP GO:1904424 regulation of GTP binding IEP Predict GO terms from Neighborhoods
BP GO:1904846 negative regulation of establishment of bipolar cell polarity IEP Predict GO terms from Neighborhoods
BP GO:1905114 cell surface receptor signaling pathway involved in cell-cell signaling IEP Predict GO terms from Neighborhoods
BP GO:2000058 regulation of ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:2000059 negative regulation of ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:2000060 positive regulation of ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:2000114 regulation of establishment of cell polarity IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 26 134
IPR009057 Homeobox-like_sf 205 265
IPR011006 CheY-like_superfamily 23 150
IPR001005 SANT/Myb 211 260
IPR006447 Myb_dom_plants 208 262
No external refs found!