SOLTUB.AGRIA.G00000039625


Description : Cyclin-dependent kinase


Gene families : OG_02_0011590 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000039625
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_211


Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEA AHRD
CC GO:0000439 transcription factor TFIIH core complex IEA AHRD
CC GO:0000775 chromosome, centromeric region IEA AHRD
CC GO:0000785 chromatin IEA AHRD
BP GO:0001100 negative regulation of exit from mitosis IEA AHRD
BP GO:0001558 regulation of cell growth IEA AHRD
CC GO:0001650 fibrillar center IEA AHRD
BP GO:0001824 blastocyst development IEA AHRD
BP GO:0001843 neural tube closure IEA AHRD
MF GO:0004693 cyclin-dependent protein serine/threonine kinase activity IEA AHRD
MF GO:0005524 ATP binding IEA AHRD
CC GO:0005829 cytosol IEA AHRD
CC GO:0005886 plasma membrane IEA AHRD
BP GO:0006355 regulation of DNA-templated transcription IEA AHRD
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEA AHRD
MF GO:0008022 protein C-terminus binding IEA AHRD
MF GO:0008094 ATP-dependent activity, acting on DNA IEA AHRD
BP GO:0008283 cell population proliferation IEA AHRD
MF GO:0008353 RNA polymerase II CTD heptapeptide repeat kinase activity IEA AHRD
BP GO:0010078 maintenance of root meristem identity IEA AHRD
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle IEA AHRD
CC GO:0016592 mediator complex IEA AHRD
CC GO:0019907 cyclin-dependent protein kinase activating kinase holoenzyme complex IEA AHRD
BP GO:0021508 floor plate formation IEA AHRD
BP GO:0031031 positive regulation of septation initiation signaling IEA AHRD
BP GO:0031076 embryonic camera-type eye development IEA AHRD
BP GO:0031138 negative regulation of conjugation with cellular fusion IEA AHRD
BP GO:0031536 positive regulation of exit from mitosis IEA AHRD
BP GO:0031568 mitotic G1 cell size control checkpoint signaling IEA AHRD
BP GO:0032091 negative regulation of protein binding IEA AHRD
CC GO:0035974 meiotic spindle pole body IEA AHRD
BP GO:0042307 positive regulation of protein import into nucleus IEA AHRD
CC GO:0044732 mitotic spindle pole body IEA AHRD
MF GO:0044877 protein-containing complex binding IEA AHRD
BP GO:0045023 G0 to G1 transition IEA AHRD
BP GO:0045842 positive regulation of mitotic metaphase/anaphase transition IEA AHRD
BP GO:0048706 embryonic skeletal system development IEA AHRD
BP GO:0050684 regulation of mRNA processing IEA AHRD
BP GO:0050821 protein stabilization IEA AHRD
BP GO:0060021 roof of mouth development IEA AHRD
BP GO:0060271 cilium assembly IEA AHRD
BP GO:0061245 establishment or maintenance of bipolar cell polarity IEA AHRD
BP GO:0061512 protein localization to cilium IEA AHRD
BP GO:0062123 regulation of linear element maturation IEA AHRD
CC GO:0070516 CAK-ERCC2 complex IEA AHRD
CC GO:0070985 transcription factor TFIIK complex IEA AHRD
BP GO:0072429 response to intra-S DNA damage checkpoint signaling IEA AHRD
BP GO:0072435 response to mitotic G2 DNA damage checkpoint signaling IEA AHRD
BP GO:0072441 response to meiotic DNA replication checkpoint signaling IEA AHRD
BP GO:0110045 negative regulation of cell cycle switching, mitotic to meiotic cell cycle IEA AHRD
BP GO:0140429 positive regulation of mitotic sister chromatid biorientation IEA AHRD
CC GO:0140445 chromosome, telomeric repeat region IEA AHRD
BP GO:1901621 negative regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning IEA AHRD
BP GO:1902424 negative regulation of attachment of mitotic spindle microtubules to kinetochore IEA AHRD
BP GO:1902845 negative regulation of mitotic spindle elongation IEA AHRD
BP GO:1903317 regulation of protein maturation IEA AHRD
BP GO:1903380 positive regulation of mitotic chromosome condensation IEA AHRD
BP GO:1903465 positive regulation of mitotic cell cycle DNA replication IEA AHRD
BP GO:1903467 negative regulation of mitotic DNA replication initiation IEA AHRD
BP GO:1903500 negative regulation of mitotic actomyosin contractile ring assembly IEA AHRD
BP GO:1904514 positive regulation of initiation of premeiotic DNA replication IEA AHRD
BP GO:1904537 negative regulation of mitotic telomere tethering at nuclear periphery IEA AHRD
BP GO:1905168 positive regulation of double-strand break repair via homologous recombination IEA AHRD
BP GO:1905263 positive regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination IEA AHRD
BP GO:1905757 negative regulation of primary cell septum biogenesis IEA AHRD
BP GO:1905785 negative regulation of anaphase-promoting complex-dependent catabolic process IEA AHRD
CC GO:1990023 mitotic spindle midzone IEA AHRD
BP GO:1990403 embryonic brain development IEA AHRD
BP GO:1990820 response to mitotic DNA integrity checkpoint signaling IEA AHRD
BP GO:2001033 negative regulation of double-strand break repair via nonhomologous end joining IEA AHRD
BP GO:2001234 negative regulation of apoptotic signaling pathway IEA AHRD
Type GO Term Name Evidence Source
BP GO:0002376 immune system process IEP Predict GO terms from Neighborhoods
CC GO:0005622 intracellular anatomical structure IEP Predict GO terms from Neighborhoods
BP GO:0006952 defense response IEP Predict GO terms from Neighborhoods
BP GO:0006955 immune response IEP Predict GO terms from Neighborhoods
BP GO:0008219 cell death IEP Predict GO terms from Neighborhoods
BP GO:0009605 response to external stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009626 plant-type hypersensitive response IEP Predict GO terms from Neighborhoods
BP GO:0012501 programmed cell death IEP Predict GO terms from Neighborhoods
BP GO:0034050 programmed cell death induced by symbiont IEP Predict GO terms from Neighborhoods
BP GO:0043207 response to external biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0044403 biological process involved in symbiotic interaction IEP Predict GO terms from Neighborhoods
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP Predict GO terms from Neighborhoods
BP GO:0045087 innate immune response IEP Predict GO terms from Neighborhoods
BP GO:0051607 defense response to virus IEP Predict GO terms from Neighborhoods
BP GO:0051702 biological process involved in interaction with symbiont IEP Predict GO terms from Neighborhoods
BP GO:0051707 response to other organism IEP Predict GO terms from Neighborhoods
BP GO:0098542 defense response to other organism IEP Predict GO terms from Neighborhoods
BP GO:0140546 defense response to symbiont IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 282 411
IPR000719 Prot_kinase_dom 21 188
IPR011009 Kinase-like_dom_sf 7 433
No external refs found!