SOLTUB.AGRIA.G00000040019


Description : Ypt/Rab-GAP domain of gyp1p superfamily protein


Gene families : OG_02_0007187 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000040019
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_96

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000040033 No alias Ypt/Rab-GAP domain of gyp1p superfamily protein 0.06 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000040033 No alias Ypt/Rab-GAP domain of gyp1p superfamily protein 0.06 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000040033 No alias Ypt/Rab-GAP domain of gyp1p superfamily protein 0.06 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEA AHRD
CC GO:0005576 extracellular region IEA AHRD
CC GO:0005768 endosome IEA AHRD
CC GO:0005829 cytosol IEA AHRD
BP GO:0015031 protein transport IEA AHRD
CC GO:0030659 cytoplasmic vesicle membrane IEA AHRD
MF GO:0031267 small GTPase binding IEA AHRD
BP GO:0033043 regulation of organelle organization IEA AHRD
BP GO:0034499 late endosome to Golgi transport IEA AHRD
CC GO:0042470 melanosome IEA AHRD
BP GO:0043547 positive regulation of GTPase activity IEA AHRD
BP GO:0045944 positive regulation of transcription by RNA polymerase II IEA AHRD
Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP Predict GO terms from Neighborhoods
MF GO:0000155 phosphorelay sensor kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0002119 nematode larval development IEP Predict GO terms from Neighborhoods
BP GO:0002164 larval development IEP Predict GO terms from Neighborhoods
BP GO:0002237 response to molecule of bacterial origin IEP Predict GO terms from Neighborhoods
BP GO:0002790 peptide secretion IEP Predict GO terms from Neighborhoods
MF GO:0003756 protein disulfide isomerase activity IEP Predict GO terms from Neighborhoods
MF GO:0003846 2-acylglycerol O-acyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004190 aspartic-type endopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004301 epoxide hydrolase activity IEP Predict GO terms from Neighborhoods
MF GO:0004673 protein histidine kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004772 sterol O-acyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004930 G protein-coupled receptor activity IEP Predict GO terms from Neighborhoods
MF GO:0005484 SNAP receptor activity IEP Predict GO terms from Neighborhoods
MF GO:0005504 fatty acid binding IEP Predict GO terms from Neighborhoods
CC GO:0005677 chromatin silencing complex IEP Predict GO terms from Neighborhoods
CC GO:0005765 lysosomal membrane IEP Predict GO terms from Neighborhoods
CC GO:0005773 vacuole IEP Predict GO terms from Neighborhoods
CC GO:0005856 cytoskeleton IEP Predict GO terms from Neighborhoods
BP GO:0006071 glycerol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006622 protein targeting to lysosome IEP Predict GO terms from Neighborhoods
BP GO:0006640 monoacylglycerol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006662 glycerol ether metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006906 vesicle fusion IEP Predict GO terms from Neighborhoods
BP GO:0006907 pinocytosis IEP Predict GO terms from Neighborhoods
BP GO:0006914 autophagy IEP Predict GO terms from Neighborhoods
BP GO:0006954 inflammatory response IEP Predict GO terms from Neighborhoods
BP GO:0006996 organelle organization IEP Predict GO terms from Neighborhoods
BP GO:0007032 endosome organization IEP Predict GO terms from Neighborhoods
BP GO:0007033 vacuole organization IEP Predict GO terms from Neighborhoods
BP GO:0007040 lysosome organization IEP Predict GO terms from Neighborhoods
BP GO:0007041 lysosomal transport IEP Predict GO terms from Neighborhoods
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0007275 multicellular organism development IEP Predict GO terms from Neighborhoods
BP GO:0008088 axo-dendritic transport IEP Predict GO terms from Neighborhoods
BP GO:0008089 anterograde axonal transport IEP Predict GO terms from Neighborhoods
BP GO:0008333 endosome to lysosome transport IEP Predict GO terms from Neighborhoods
MF GO:0008502 melatonin receptor activity IEP Predict GO terms from Neighborhoods
BP GO:0008611 ether lipid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0008630 intrinsic apoptotic signaling pathway in response to DNA damage IEP Predict GO terms from Neighborhoods
BP GO:0009306 protein secretion IEP Predict GO terms from Neighborhoods
BP GO:0009651 response to salt stress IEP Predict GO terms from Neighborhoods
BP GO:0009720 detection of hormone stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009726 detection of endogenous stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009727 detection of ethylene stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009737 response to abscisic acid IEP Predict GO terms from Neighborhoods
BP GO:0009743 response to carbohydrate IEP Predict GO terms from Neighborhoods
MF GO:0009927 histidine phosphotransfer kinase activity IEP Predict GO terms from Neighborhoods
CC GO:0010008 endosome membrane IEP Predict GO terms from Neighborhoods
BP GO:0010048 vernalization response IEP Predict GO terms from Neighborhoods
BP GO:0010105 negative regulation of ethylene-activated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010119 regulation of stomatal movement IEP Predict GO terms from Neighborhoods
BP GO:0010866 regulation of triglyceride biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010867 positive regulation of triglyceride biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0015035 protein-disulfide reductase activity IEP Predict GO terms from Neighborhoods
MF GO:0015036 disulfide oxidoreductase activity IEP Predict GO terms from Neighborhoods
BP GO:0015918 sterol transport IEP Predict GO terms from Neighborhoods
CC GO:0016021 integral component of membrane IEP Predict GO terms from Neighborhoods
BP GO:0016043 cellular component organization IEP Predict GO terms from Neighborhoods
BP GO:0016050 vesicle organization IEP Predict GO terms from Neighborhoods
BP GO:0016311 dephosphorylation IEP Predict GO terms from Neighborhoods
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0016604 nuclear body IEP Predict GO terms from Neighborhoods
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016759 cellulose synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016801 hydrolase activity, acting on ether bonds IEP Predict GO terms from Neighborhoods
MF GO:0016803 ether hydrolase activity IEP Predict GO terms from Neighborhoods
MF GO:0016860 intramolecular oxidoreductase activity IEP Predict GO terms from Neighborhoods
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Predict GO terms from Neighborhoods
MF GO:0016971 flavin-linked sulfhydryl oxidase activity IEP Predict GO terms from Neighborhoods
MF GO:0016972 thiol oxidase activity IEP Predict GO terms from Neighborhoods
BP GO:0018106 peptidyl-histidine phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0018202 peptidyl-histidine modification IEP Predict GO terms from Neighborhoods
BP GO:0018904 ether metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019236 response to pheromone IEP Predict GO terms from Neighborhoods
BP GO:0019400 alditol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019751 polyol metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0019992 diacylglycerol binding IEP Predict GO terms from Neighborhoods
BP GO:0022406 membrane docking IEP Predict GO terms from Neighborhoods
BP GO:0023061 signal release IEP Predict GO terms from Neighborhoods
BP GO:0030072 peptide hormone secretion IEP Predict GO terms from Neighborhoods
BP GO:0030073 insulin secretion IEP Predict GO terms from Neighborhoods
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predict GO terms from Neighborhoods
CC GO:0030123 AP-3 adaptor complex IEP Predict GO terms from Neighborhoods
CC GO:0030131 clathrin adaptor complex IEP Predict GO terms from Neighborhoods
CC GO:0030173 integral component of Golgi membrane IEP Predict GO terms from Neighborhoods
BP GO:0030301 cholesterol transport IEP Predict GO terms from Neighborhoods
BP GO:0030656 regulation of vitamin metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0030660 Golgi-associated vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030662 coated vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030665 clathrin-coated vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0031201 SNARE complex IEP Predict GO terms from Neighborhoods
CC GO:0031224 intrinsic component of membrane IEP Predict GO terms from Neighborhoods
CC GO:0031228 intrinsic component of Golgi membrane IEP Predict GO terms from Neighborhoods
CC GO:0031300 intrinsic component of organelle membrane IEP Predict GO terms from Neighborhoods
CC GO:0031301 integral component of organelle membrane IEP Predict GO terms from Neighborhoods
CC GO:0031519 PcG protein complex IEP Predict GO terms from Neighborhoods
BP GO:0032368 regulation of lipid transport IEP Predict GO terms from Neighborhoods
BP GO:0032501 multicellular organismal process IEP Predict GO terms from Neighborhoods
MF GO:0033293 monocarboxylic acid binding IEP Predict GO terms from Neighborhoods
BP GO:0033365 protein localization to organelle IEP Predict GO terms from Neighborhoods
BP GO:0033619 membrane protein proteolysis IEP Predict GO terms from Neighborhoods
BP GO:0034377 plasma lipoprotein particle assembly IEP Predict GO terms from Neighborhoods
BP GO:0034379 very-low-density lipoprotein particle assembly IEP Predict GO terms from Neighborhoods
BP GO:0034389 lipid droplet organization IEP Predict GO terms from Neighborhoods
BP GO:0034698 response to gonadotropin IEP Predict GO terms from Neighborhoods
MF GO:0034737 ergosterol O-acyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0035064 methylated histone binding IEP Predict GO terms from Neighborhoods
BP GO:0035336 long-chain fatty-acyl-CoA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0035337 fatty-acyl-CoA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0035592 establishment of protein localization to extracellular region IEP Predict GO terms from Neighborhoods
BP GO:0035970 peptidyl-threonine dephosphorylation IEP Predict GO terms from Neighborhoods
MF GO:0038023 signaling receptor activity IEP Predict GO terms from Neighborhoods
MF GO:0038199 ethylene receptor activity IEP Predict GO terms from Neighborhoods
MF GO:0042500 aspartic endopeptidase activity, intramembrane cleaving IEP Predict GO terms from Neighborhoods
CC GO:0042995 cell projection IEP Predict GO terms from Neighborhoods
BP GO:0043157 response to cation stress IEP Predict GO terms from Neighborhoods
BP GO:0043268 positive regulation of potassium ion transport IEP Predict GO terms from Neighborhoods
BP GO:0044058 regulation of digestive system process IEP Predict GO terms from Neighborhoods
BP GO:0044248 cellular catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044752 response to human chorionic gonadotropin IEP Predict GO terms from Neighborhoods
BP GO:0046320 regulation of fatty acid oxidation IEP Predict GO terms from Neighborhoods
BP GO:0046321 positive regulation of fatty acid oxidation IEP Predict GO terms from Neighborhoods
BP GO:0046339 diacylglycerol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046460 neutral lipid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046462 monoacylglycerol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046463 acylglycerol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046485 ether lipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046504 glycerol ether biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046879 hormone secretion IEP Predict GO terms from Neighborhoods
BP GO:0047496 vesicle transport along microtubule IEP Predict GO terms from Neighborhoods
BP GO:0048278 vesicle docking IEP Predict GO terms from Neighborhoods
BP GO:0048489 synaptic vesicle transport IEP Predict GO terms from Neighborhoods
BP GO:0048490 anterograde synaptic vesicle transport IEP Predict GO terms from Neighborhoods
BP GO:0048587 regulation of short-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0050665 hydrogen peroxide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0050795 regulation of behavior IEP Predict GO terms from Neighborhoods
BP GO:0050867 positive regulation of cell activation IEP Predict GO terms from Neighborhoods
BP GO:0050896 response to stimulus IEP Predict GO terms from Neighborhoods
BP GO:0051569 regulation of histone H3-K4 methylation IEP Predict GO terms from Neighborhoods
BP GO:0051570 regulation of histone H3-K9 methylation IEP Predict GO terms from Neighborhoods
BP GO:0051571 positive regulation of histone H3-K4 methylation IEP Predict GO terms from Neighborhoods
BP GO:0051574 positive regulation of histone H3-K9 methylation IEP Predict GO terms from Neighborhoods
BP GO:0051640 organelle localization IEP Predict GO terms from Neighborhoods
BP GO:0051648 vesicle localization IEP Predict GO terms from Neighborhoods
BP GO:0051650 establishment of vesicle localization IEP Predict GO terms from Neighborhoods
MF GO:0051740 ethylene binding IEP Predict GO terms from Neighborhoods
BP GO:0055089 fatty acid homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0060089 molecular transducer activity IEP Predict GO terms from Neighborhoods
BP GO:0060259 regulation of feeding behavior IEP Predict GO terms from Neighborhoods
BP GO:0061085 regulation of histone H3-K27 methylation IEP Predict GO terms from Neighborhoods
BP GO:0061087 positive regulation of histone H3-K27 methylation IEP Predict GO terms from Neighborhoods
BP GO:0061462 protein localization to lysosome IEP Predict GO terms from Neighborhoods
BP GO:0061919 process utilizing autophagic mechanism IEP Predict GO terms from Neighborhoods
BP GO:0065005 protein-lipid complex assembly IEP Predict GO terms from Neighborhoods
MF GO:0070001 aspartic-type peptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0070298 negative regulation of phosphorelay signal transduction system IEP Predict GO terms from Neighborhoods
CC GO:0071458 integral component of cytoplasmic side of endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
CC GO:0071556 integral component of lumenal side of endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
BP GO:0071692 protein localization to extracellular region IEP Predict GO terms from Neighborhoods
BP GO:0071825 protein-lipid complex subunit organization IEP Predict GO terms from Neighborhoods
BP GO:0071827 plasma lipoprotein particle organization IEP Predict GO terms from Neighborhoods
BP GO:0071840 cellular component organization or biogenesis IEP Predict GO terms from Neighborhoods
MF GO:0072328 alkene binding IEP Predict GO terms from Neighborhoods
BP GO:0072384 organelle transport along microtubule IEP Predict GO terms from Neighborhoods
BP GO:0080171 lytic vacuole organization IEP Predict GO terms from Neighborhoods
BP GO:0090174 organelle membrane fusion IEP Predict GO terms from Neighborhoods
BP GO:0090207 regulation of triglyceride metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090208 positive regulation of triglyceride metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0097193 intrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0097305 response to alcohol IEP Predict GO terms from Neighborhoods
BP GO:0097384 cellular lipid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0097479 synaptic vesicle localization IEP Predict GO terms from Neighborhoods
CC GO:0098588 bounding membrane of organelle IEP Predict GO terms from Neighborhoods
CC GO:0098796 membrane protein complex IEP Predict GO terms from Neighborhoods
BP GO:0098930 axonal transport IEP Predict GO terms from Neighborhoods
BP GO:0099514 synaptic vesicle cytoskeletal transport IEP Predict GO terms from Neighborhoods
BP GO:0099517 synaptic vesicle transport along microtubule IEP Predict GO terms from Neighborhoods
BP GO:0099518 vesicle cytoskeletal trafficking IEP Predict GO terms from Neighborhoods
MF GO:0140034 methylation-dependent protein binding IEP Predict GO terms from Neighborhoods
BP GO:0140042 lipid droplet formation IEP Predict GO terms from Neighborhoods
BP GO:0140056 organelle localization by membrane tethering IEP Predict GO terms from Neighborhoods
MF GO:0140299 small molecule sensor activity IEP Predict GO terms from Neighborhoods
BP GO:1900109 regulation of histone H3-K9 dimethylation IEP Predict GO terms from Neighborhoods
BP GO:1900111 positive regulation of histone H3-K9 dimethylation IEP Predict GO terms from Neighborhoods
BP GO:1900140 regulation of seedling development IEP Predict GO terms from Neighborhoods
BP GO:1901503 ether biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901738 regulation of vitamin A metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902224 ketone body metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902652 secondary alcohol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903409 reactive oxygen species biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903998 regulation of eating behavior IEP Predict GO terms from Neighborhoods
MF GO:1904408 melatonin binding IEP Predict GO terms from Neighborhoods
BP GO:1904478 regulation of intestinal absorption IEP Predict GO terms from Neighborhoods
BP GO:1904729 regulation of intestinal lipid absorption IEP Predict GO terms from Neighborhoods
BP GO:1905952 regulation of lipid localization IEP Predict GO terms from Neighborhoods
BP GO:2000489 regulation of hepatic stellate cell activation IEP Predict GO terms from Neighborhoods
BP GO:2000491 positive regulation of hepatic stellate cell activation IEP Predict GO terms from Neighborhoods
BP GO:2000904 regulation of starch metabolic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR035969 Rab-GTPase_TBC_sf 263 429
IPR035969 Rab-GTPase_TBC_sf 41 285
IPR000195 Rab-GTPase-TBC_dom 165 325
No external refs found!