SOLTUB.AGRIA.G00000040258


Description : ABC transporter D family member 2


Gene families : OG_02_0017617 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000040258
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_27


Type GO Term Name Evidence Source
BP GO:0001676 long-chain fatty acid metabolic process IEA AHRD
MF GO:0005324 long-chain fatty acid transporter activity IEA AHRD
MF GO:0005515 protein binding IEA AHRD
MF GO:0005524 ATP binding IEA AHRD
CC GO:0005739 mitochondrion IEA AHRD
CC GO:0005778 peroxisomal membrane IEA AHRD
CC GO:0005886 plasma membrane IEA AHRD
BP GO:0006635 fatty acid beta-oxidation IEA AHRD
BP GO:0007031 peroxisome organization IEA AHRD
BP GO:0008610 lipid biosynthetic process IEA AHRD
CC GO:0009507 chloroplast IEA AHRD
BP GO:0015910 long-chain fatty acid import into peroxisome IEA AHRD
CC GO:0016021 integral component of membrane IEA AHRD
BP GO:0019217 regulation of fatty acid metabolic process IEA AHRD
BP GO:0042221 response to chemical IEA AHRD
BP GO:0042760 very long-chain fatty acid catabolic process IEA AHRD
BP GO:0048522 positive regulation of cellular process IEA AHRD
BP GO:0048856 anatomical structure development IEA AHRD
BP GO:0072330 monocarboxylic acid biosynthetic process IEA AHRD
MF GO:0140359 ABC-type transporter activity IEA AHRD
BP GO:1901360 organic cyclic compound metabolic process IEA AHRD
Type GO Term Name Evidence Source
MF GO:0000175 3'-5'-exoribonuclease activity IEP Predict GO terms from Neighborhoods
CC GO:0000178 exosome (RNase complex) IEP Predict GO terms from Neighborhoods
BP GO:0000749 response to pheromone triggering conjugation with cellular fusion IEP Predict GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Predict GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003729 mRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003746 translation elongation factor activity IEP Predict GO terms from Neighborhoods
MF GO:0003824 catalytic activity IEP Predict GO terms from Neighborhoods
MF GO:0003924 GTPase activity IEP Predict GO terms from Neighborhoods
MF GO:0003951 NAD+ kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004175 endopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004222 metalloendopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004355 glutamate synthase (NADPH) activity IEP Predict GO terms from Neighborhoods
MF GO:0004532 exoribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004673 protein histidine kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0005525 GTP binding IEP Predict GO terms from Neighborhoods
CC GO:0005829 cytosol IEP Predict GO terms from Neighborhoods
BP GO:0006163 purine nucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006413 translational initiation IEP Predict GO terms from Neighborhoods
BP GO:0006468 protein phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0006536 glutamate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006537 glutamate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006541 glutamine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006605 protein targeting IEP Predict GO terms from Neighborhoods
BP GO:0006739 NADP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006741 NADP biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006753 nucleoside phosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006787 porphyrin-containing compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006793 phosphorus metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006796 phosphate-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0007005 mitochondrion organization IEP Predict GO terms from Neighborhoods
MF GO:0008135 translation factor activity, RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0008320 protein transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0008494 translation activator activity IEP Predict GO terms from Neighborhoods
MF GO:0008728 GTP diphosphokinase activity IEP Predict GO terms from Neighborhoods
MF GO:0008859 exoribonuclease II activity IEP Predict GO terms from Neighborhoods
BP GO:0009117 nucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009150 purine ribonucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009165 nucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009314 response to radiation IEP Predict GO terms from Neighborhoods
BP GO:0009416 response to light stimulus IEP Predict GO terms from Neighborhoods
CC GO:0009526 plastid envelope IEP Predict GO terms from Neighborhoods
CC GO:0009532 plastid stroma IEP Predict GO terms from Neighborhoods
CC GO:0009535 chloroplast thylakoid membrane IEP Predict GO terms from Neighborhoods
CC GO:0009543 chloroplast thylakoid lumen IEP Predict GO terms from Neighborhoods
CC GO:0009570 chloroplast stroma IEP Predict GO terms from Neighborhoods
BP GO:0009637 response to blue light IEP Predict GO terms from Neighborhoods
BP GO:0009643 photosynthetic acclimation IEP Predict GO terms from Neighborhoods
BP GO:0009657 plastid organization IEP Predict GO terms from Neighborhoods
BP GO:0009658 chloroplast organization IEP Predict GO terms from Neighborhoods
BP GO:0009767 photosynthetic electron transport chain IEP Predict GO terms from Neighborhoods
BP GO:0009853 photorespiration IEP Predict GO terms from Neighborhoods
MF GO:0009881 photoreceptor activity IEP Predict GO terms from Neighborhoods
MF GO:0009882 blue light photoreceptor activity IEP Predict GO terms from Neighborhoods
CC GO:0009898 cytoplasmic side of plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0009903 chloroplast avoidance movement IEP Predict GO terms from Neighborhoods
BP GO:0009904 chloroplast accumulation movement IEP Predict GO terms from Neighborhoods
CC GO:0009941 chloroplast envelope IEP Predict GO terms from Neighborhoods
BP GO:0010109 regulation of photosynthesis IEP Predict GO terms from Neighborhoods
BP GO:0010114 response to red light IEP Predict GO terms from Neighborhoods
BP GO:0010155 regulation of proton transport IEP Predict GO terms from Neighborhoods
BP GO:0010196 nonphotochemical quenching IEP Predict GO terms from Neighborhoods
BP GO:0010207 photosystem II assembly IEP Predict GO terms from Neighborhoods
BP GO:0010257 NADH dehydrogenase complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0010360 negative regulation of anion channel activity IEP Predict GO terms from Neighborhoods
BP GO:0010361 regulation of anion channel activity by blue light IEP Predict GO terms from Neighborhoods
BP GO:0010362 negative regulation of anion channel activity by blue light IEP Predict GO terms from Neighborhoods
BP GO:0010608 post-transcriptional regulation of gene expression IEP Predict GO terms from Neighborhoods
MF GO:0015450 protein-transporting ATPase activity IEP Predict GO terms from Neighborhoods
MF GO:0015462 ABC-type protein transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015930 glutamate synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0015970 guanosine tetraphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0015996 chlorophyll catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016040 glutamate synthase (NADH) activity IEP Predict GO terms from Neighborhoods
MF GO:0016041 glutamate synthase (ferredoxin) activity IEP Predict GO terms from Neighborhoods
BP GO:0016226 iron-sulfur cluster assembly IEP Predict GO terms from Neighborhoods
MF GO:0016301 kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0016310 phosphorylation IEP Predict GO terms from Neighborhoods
MF GO:0016464 chloroplast protein-transporting ATPase activity IEP Predict GO terms from Neighborhoods
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predict GO terms from Neighborhoods
MF GO:0016639 oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016643 oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016656 monodehydroascorbate reductase (NADH) activity IEP Predict GO terms from Neighborhoods
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Predict GO terms from Neighborhoods
MF GO:0016731 oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predict GO terms from Neighborhoods
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016778 diphosphotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016787 hydrolase activity IEP Predict GO terms from Neighborhoods
MF GO:0016896 exoribonuclease activity, producing 5'-phosphomonoesters IEP Predict GO terms from Neighborhoods
BP GO:0017038 protein import IEP Predict GO terms from Neighborhoods
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0019236 response to pheromone IEP Predict GO terms from Neighborhoods
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019362 pyridine nucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019637 organophosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019676 ammonia assimilation cycle IEP Predict GO terms from Neighborhoods
BP GO:0019740 nitrogen utilization IEP Predict GO terms from Neighborhoods
BP GO:0019750 chloroplast localization IEP Predict GO terms from Neighborhoods
MF GO:0022884 macromolecule transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0031163 metallo-sulfur cluster assembly IEP Predict GO terms from Neighborhoods
BP GO:0031279 regulation of cyclase activity IEP Predict GO terms from Neighborhoods
CC GO:0031522 cell envelope Sec protein transport complex IEP Predict GO terms from Neighborhoods
CC GO:0031967 organelle envelope IEP Predict GO terms from Neighborhoods
CC GO:0031969 chloroplast membrane IEP Predict GO terms from Neighborhoods
CC GO:0031975 envelope IEP Predict GO terms from Neighborhoods
CC GO:0031978 plastid thylakoid lumen IEP Predict GO terms from Neighborhoods
BP GO:0032069 regulation of nuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0032074 negative regulation of nuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0032543 mitochondrial translation IEP Predict GO terms from Neighborhoods
BP GO:0032544 plastid translation IEP Predict GO terms from Neighborhoods
MF GO:0032561 guanyl ribonucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0032790 ribosome disassembly IEP Predict GO terms from Neighborhoods
BP GO:0032981 mitochondrial respiratory chain complex I assembly IEP Predict GO terms from Neighborhoods
BP GO:0033015 tetrapyrrole catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034036 purine ribonucleoside bisphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0034357 photosynthetic membrane IEP Predict GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0042170 plastid membrane IEP Predict GO terms from Neighborhoods
BP GO:0042549 photosystem II stabilization IEP Predict GO terms from Neighborhoods
CC GO:0042651 thylakoid membrane IEP Predict GO terms from Neighborhoods
MF GO:0042736 NADH kinase activity IEP Predict GO terms from Neighborhoods
CC GO:0043332 mating projection tip IEP Predict GO terms from Neighborhoods
BP GO:0043952 protein transport by the Sec complex IEP Predict GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0045036 protein targeting to chloroplast IEP Predict GO terms from Neighborhoods
BP GO:0045037 protein import into chloroplast stroma IEP Predict GO terms from Neighborhoods
MF GO:0045181 glutamate synthase activity, NAD(P)H as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0045182 translation regulator activity IEP Predict GO terms from Neighborhoods
BP GO:0046149 pigment catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0048038 quinone binding IEP Predict GO terms from Neighborhoods
MF GO:0051536 iron-sulfur cluster binding IEP Predict GO terms from Neighborhoods
MF GO:0051538 3 iron, 4 sulfur cluster binding IEP Predict GO terms from Neighborhoods
MF GO:0051540 metal cluster binding IEP Predict GO terms from Neighborhoods
BP GO:0051644 plastid localization IEP Predict GO terms from Neighborhoods
BP GO:0051775 response to redox state IEP Predict GO terms from Neighborhoods
BP GO:0051776 detection of redox state IEP Predict GO terms from Neighborhoods
CC GO:0055035 plastid thylakoid membrane IEP Predict GO terms from Neighborhoods
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0060359 response to ammonium ion IEP Predict GO terms from Neighborhoods
BP GO:0060700 regulation of ribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0060701 negative regulation of ribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0070584 mitochondrion morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0071444 cellular response to pheromone IEP Predict GO terms from Neighborhoods
BP GO:0071806 protein transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0072524 pyridine-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0072596 establishment of protein localization to chloroplast IEP Predict GO terms from Neighborhoods
BP GO:0072598 protein localization to chloroplast IEP Predict GO terms from Neighborhoods
BP GO:0080005 photosystem stoichiometry adjustment IEP Predict GO terms from Neighborhoods
BP GO:0080114 positive regulation of glycine hydroxymethyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0080177 plastoglobule organization IEP Predict GO terms from Neighborhoods
BP GO:0080183 response to photooxidative stress IEP Predict GO terms from Neighborhoods
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Predict GO terms from Neighborhoods
BP GO:0090407 organophosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic IEP Predict GO terms from Neighborhoods
BP GO:0097054 L-glutamate biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0106310 protein serine kinase activity IEP Predict GO terms from Neighborhoods
BP GO:1901031 regulation of response to reactive oxygen species IEP Predict GO terms from Neighborhoods
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901403 positive regulation of tetrapyrrole metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901465 positive regulation of tetrapyrrole biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901562 response to paraquat IEP Predict GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901917 regulation of exoribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:1901918 negative regulation of exoribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:1902171 regulation of tocopherol cyclase activity IEP Predict GO terms from Neighborhoods
BP GO:1902326 positive regulation of chlorophyll biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903792 negative regulation of anion transport IEP Predict GO terms from Neighborhoods
BP GO:1903960 negative regulation of anion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1904143 positive regulation of carotenoid biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:1905354 exoribonuclease complex IEP Predict GO terms from Neighborhoods
BP GO:1905777 regulation of exonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:1905778 negative regulation of exonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:1990066 energy quenching IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 98 355
IPR027417 P-loop_NTPase 447 707
IPR036640 ABC1_TM_sf 85 401
IPR003439 ABC_transporter-like_ATP-bd 465 668
No external refs found!