GO:1900056 SOLTUB.AGRIA.G00000040347 details

SOLTUB.AGRIA.G00000040347


Description : Myb-like protein


Gene families : OG_02_0023517 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000040347
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_75


Type GO Term Name Evidence Source
BP GO:0000082 G1/S transition of mitotic cell cycle IEA AHRD
BP GO:0000122 negative regulation of transcription by RNA polymerase II IEA AHRD
BP GO:0000281 mitotic cytokinesis IEA AHRD
CC GO:0000791 euchromatin IEA AHRD
MF GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA AHRD
MF GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific IEA AHRD
BP GO:0001666 response to hypoxia IEA AHRD
BP GO:0001701 in utero embryonic development IEA AHRD
CC GO:0005654 nucleoplasm IEA AHRD
CC GO:0005700 polytene chromosome IEA AHRD
CC GO:0005829 cytosol IEA AHRD
BP GO:0006338 chromatin remodeling IEA AHRD
BP GO:0006816 calcium ion transport IEA AHRD
BP GO:0006952 defense response IEA AHRD
BP GO:0007030 Golgi organization IEA AHRD
BP GO:0007088 regulation of mitotic nuclear division IEA AHRD
BP GO:0007099 centriole replication IEA AHRD
BP GO:0007141 male meiosis I IEA AHRD
BP GO:0007283 spermatogenesis IEA AHRD
BP GO:0007307 eggshell chorion gene amplification IEA AHRD
BP GO:0010200 response to chitin IEA AHRD
BP GO:0010228 vegetative to reproductive phase transition of meristem IEA AHRD
BP GO:0010262 somatic embryogenesis IEA AHRD
BP GO:0010439 regulation of glucosinolate biosynthetic process IEA AHRD
BP GO:0010529 negative regulation of transposition IEA AHRD
BP GO:0010929 positive regulation of auxin mediated signaling pathway IEA AHRD
BP GO:0010971 positive regulation of G2/M transition of mitotic cell cycle IEA AHRD
CC GO:0016363 nuclear matrix IEA AHRD
BP GO:0017145 stem cell division IEA AHRD
BP GO:0030099 myeloid cell differentiation IEA AHRD
BP GO:0030183 B cell differentiation IEA AHRD
BP GO:0030261 chromosome condensation IEA AHRD
CC GO:0031523 Myb complex IEA AHRD
BP GO:0032967 positive regulation of collagen biosynthetic process IEA AHRD
CC GO:0042025 host cell nucleus IEA AHRD
BP GO:0043525 positive regulation of neuron apoptotic process IEA AHRD
BP GO:0045624 positive regulation of T-helper cell differentiation IEA AHRD
BP GO:0045792 negative regulation of cell size IEA AHRD
BP GO:0045995 regulation of embryonic development IEA AHRD
BP GO:0048527 lateral root development IEA AHRD
BP GO:0048536 spleen development IEA AHRD
BP GO:0048538 thymus development IEA AHRD
BP GO:0048566 embryonic digestive tract development IEA AHRD
BP GO:0048661 positive regulation of smooth muscle cell proliferation IEA AHRD
BP GO:0048872 homeostasis of number of cells IEA AHRD
BP GO:0051571 positive regulation of histone H3-K4 methylation IEA AHRD
BP GO:0051574 positive regulation of histone H3-K9 methylation IEA AHRD
BP GO:0055089 fatty acid homeostasis IEA AHRD
BP GO:0060252 positive regulation of glial cell proliferation IEA AHRD
BP GO:0070301 cellular response to hydrogen peroxide IEA AHRD
BP GO:0071300 cellular response to retinoic acid IEA AHRD
BP GO:0071354 cellular response to interleukin-6 IEA AHRD
BP GO:0071636 positive regulation of transforming growth factor beta production IEA AHRD
MF GO:0071987 WD40-repeat domain binding IEA AHRD
BP GO:0090282 positive regulation of transcription involved in G2/M transition of mitotic cell cycle IEA AHRD
BP GO:0090307 mitotic spindle assembly IEA AHRD
BP GO:1901001 negative regulation of response to salt stress IEA AHRD
BP GO:1901533 negative regulation of hematopoietic progenitor cell differentiation IEA AHRD
BP GO:1904095 negative regulation of endosperm development IEA AHRD
BP GO:1904899 positive regulation of hepatic stellate cell proliferation IEA AHRD
BP GO:1990511 piRNA biosynthetic process IEA AHRD
BP GO:1990830 cellular response to leukemia inhibitory factor IEA AHRD
BP GO:2000491 positive regulation of hepatic stellate cell activation IEA AHRD
BP GO:2000692 negative regulation of seed maturation IEA AHRD
BP GO:2000845 positive regulation of testosterone secretion IEA AHRD
BP GO:2001280 positive regulation of unsaturated fatty acid biosynthetic process IEA AHRD
Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004602 glutathione peroxidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004623 phospholipase A2 activity IEP Predict GO terms from Neighborhoods
CC GO:0005576 extracellular region IEP Predict GO terms from Neighborhoods
CC GO:0005618 cell wall IEP Predict GO terms from Neighborhoods
BP GO:0006030 chitin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006032 chitin catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006569 tryptophan catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006949 syncytium formation IEP Predict GO terms from Neighborhoods
BP GO:0007263 nitric oxide mediated signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0008037 cell recognition IEP Predict GO terms from Neighborhoods
MF GO:0008379 thioredoxin peroxidase activity IEP Predict GO terms from Neighborhoods
MF GO:0008843 endochitinase activity IEP Predict GO terms from Neighborhoods
CC GO:0009505 plant-type cell wall IEP Predict GO terms from Neighborhoods
BP GO:0009639 response to red or far red light IEP Predict GO terms from Neighborhoods
BP GO:0009664 plant-type cell wall organization IEP Predict GO terms from Neighborhoods
BP GO:0009739 response to gibberellin IEP Predict GO terms from Neighborhoods
BP GO:0009827 plant-type cell wall modification IEP Predict GO terms from Neighborhoods
BP GO:0009828 plant-type cell wall loosening IEP Predict GO terms from Neighborhoods
BP GO:0009875 pollen-pistil interaction IEP Predict GO terms from Neighborhoods
BP GO:0010114 response to red light IEP Predict GO terms from Neighborhoods
BP GO:0010311 lateral root formation IEP Predict GO terms from Neighborhoods
BP GO:0016102 diterpenoid biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0018675 (S)-limonene 6-monooxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:0019756 cyanogenic glycoside biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0030312 external encapsulating structure IEP Predict GO terms from Neighborhoods
BP GO:0035834 indole alkaloid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042341 cyanogenic glycoside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042545 cell wall modification IEP Predict GO terms from Neighborhoods
CC GO:0043667 pollen wall IEP Predict GO terms from Neighborhoods
BP GO:0045229 external encapsulating structure organization IEP Predict GO terms from Neighborhoods
BP GO:0045487 gibberellin catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0045543 gibberellin 2-beta-dioxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0047184 1-acylglycerophosphocholine O-acyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0047499 calcium-independent phospholipase A2 activity IEP Predict GO terms from Neighborhoods
BP GO:0048544 recognition of pollen IEP Predict GO terms from Neighborhoods
MF GO:0050525 cutinase activity IEP Predict GO terms from Neighborhoods
MF GO:0050529 polyneuridine-aldehyde esterase activity IEP Predict GO terms from Neighborhoods
BP GO:0050898 nitrile metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051791 medium-chain fatty acid metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0051920 peroxiredoxin activity IEP Predict GO terms from Neighborhoods
MF GO:0052634 C-19 gibberellin 2-beta-dioxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0052689 carboxylic ester hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0060320 rejection of self pollen IEP Predict GO terms from Neighborhoods
BP GO:0071555 cell wall organization IEP Predict GO terms from Neighborhoods
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0080028 nitrile biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0140824 thioredoxin-dependent peroxiredoxin activity IEP Predict GO terms from Neighborhoods
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901136 carbohydrate derivative catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903313 positive regulation of mRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1905393 plant organ formation IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR009057 Homeobox-like_sf 34 90
IPR001005 SANT/Myb 39 80
No external refs found!