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  5. SOLTUB.AGRIA.G00000040723

SOLTUB.AGRIA.G00000040723


Description : High mobility group-T protein


Gene families : OG_02_0003299 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000040723
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_16


Type GO Term Name Evidence Source
CC GO:0000794 condensed nuclear chromosome IEA AHRD
MF GO:0003677 DNA binding IEA AHRD
MF GO:0003700 DNA-binding transcription factor activity IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000338 protein deneddylation IEP Predict GO terms from Neighborhoods
BP GO:0000919 cell plate assembly IEP Predict GO terms from Neighborhoods
BP GO:0001505 regulation of neurotransmitter levels IEP Predict GO terms from Neighborhoods
BP GO:0001523 retinoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0001568 blood vessel development IEP Predict GO terms from Neighborhoods
MF GO:0001758 retinal dehydrogenase activity IEP Predict GO terms from Neighborhoods
BP GO:0001822 kidney development IEP Predict GO terms from Neighborhoods
BP GO:0001936 regulation of endothelial cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:0001947 heart looping IEP Predict GO terms from Neighborhoods
BP GO:0002072 optic cup morphogenesis involved in camera-type eye development IEP Predict GO terms from Neighborhoods
BP GO:0002138 retinoic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0002931 response to ischemia IEP Predict GO terms from Neighborhoods
BP GO:0003143 embryonic heart tube morphogenesis IEP Predict GO terms from Neighborhoods
MF GO:0003777 microtubule motor activity IEP Predict GO terms from Neighborhoods
MF GO:0004028 3-chloroallyl aldehyde dehydrogenase activity IEP Predict GO terms from Neighborhoods
MF GO:0004029 aldehyde dehydrogenase (NAD+) activity IEP Predict GO terms from Neighborhoods
MF GO:0004030 aldehyde dehydrogenase [NAD(P)+] activity IEP Predict GO terms from Neighborhoods
MF GO:0004560 alpha-L-fucosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004745 NAD-retinol dehydrogenase activity IEP Predict GO terms from Neighborhoods
MF GO:0005501 retinoid binding IEP Predict GO terms from Neighborhoods
BP GO:0006040 amino sugar metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006067 ethanol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006117 acetaldehyde metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006581 acetylcholine catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006775 fat-soluble vitamin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006776 vitamin A metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0007112 male meiosis cytokinesis IEP Predict GO terms from Neighborhoods
BP GO:0007275 multicellular organism development IEP Predict GO terms from Neighborhoods
BP GO:0007349 cellularization IEP Predict GO terms from Neighborhoods
BP GO:0007494 midgut development IEP Predict GO terms from Neighborhoods
CC GO:0008180 COP9 signalosome IEP Predict GO terms from Neighborhoods
BP GO:0008284 positive regulation of cell population proliferation IEP Predict GO terms from Neighborhoods
BP GO:0008291 acetylcholine metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0008374 O-acyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0008631 intrinsic apoptotic signaling pathway in response to oxidative stress IEP Predict GO terms from Neighborhoods
BP GO:0008637 apoptotic mitochondrial changes IEP Predict GO terms from Neighborhoods
MF GO:0008774 acetaldehyde dehydrogenase (acetylating) activity IEP Predict GO terms from Neighborhoods
MF GO:0008957 phenylacetaldehyde dehydrogenase activity IEP Predict GO terms from Neighborhoods
BP GO:0009058 biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009448 gamma-aminobutyric acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009449 gamma-aminobutyric acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009555 pollen development IEP Predict GO terms from Neighborhoods
BP GO:0009558 embryo sac cellularization IEP Predict GO terms from Neighborhoods
BP GO:0009820 alkaloid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009821 alkaloid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009954 proximal/distal pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010245 radial microtubular system formation IEP Predict GO terms from Neighborhoods
MF GO:0010334 sesquiterpene synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0010387 COP9 signalosome assembly IEP Predict GO terms from Neighborhoods
BP GO:0014032 neural crest cell development IEP Predict GO terms from Neighborhoods
BP GO:0014706 striated muscle tissue development IEP Predict GO terms from Neighborhoods
MF GO:0015928 fucosidase activity IEP Predict GO terms from Neighborhoods
BP GO:0016106 sesquiterpenoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016114 terpenoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016331 morphogenesis of embryonic epithelium IEP Predict GO terms from Neighborhoods
MF GO:0016407 acetyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016410 N-acyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016746 acyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Predict GO terms from Neighborhoods
MF GO:0016755 aminoacyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016918 retinal binding IEP Predict GO terms from Neighborhoods
MF GO:0018479 benzaldehyde dehydrogenase (NAD+) activity IEP Predict GO terms from Neighborhoods
MF GO:0019115 benzaldehyde dehydrogenase [NAD(P)+] activity IEP Predict GO terms from Neighborhoods
MF GO:0019145 aminobutyraldehyde dehydrogenase activity IEP Predict GO terms from Neighborhoods
MF GO:0019840 isoprenoid binding IEP Predict GO terms from Neighborhoods
MF GO:0019863 IgE binding IEP Predict GO terms from Neighborhoods
MF GO:0019865 immunoglobulin binding IEP Predict GO terms from Neighborhoods
BP GO:0021515 cell differentiation in spinal cord IEP Predict GO terms from Neighborhoods
BP GO:0021522 spinal cord motor neuron differentiation IEP Predict GO terms from Neighborhoods
BP GO:0021768 nucleus accumbens development IEP Predict GO terms from Neighborhoods
BP GO:0021915 neural tube development IEP Predict GO terms from Neighborhoods
BP GO:0021953 central nervous system neuron differentiation IEP Predict GO terms from Neighborhoods
BP GO:0021983 pituitary gland development IEP Predict GO terms from Neighborhoods
BP GO:0030218 erythrocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0030324 lung development IEP Predict GO terms from Neighborhoods
BP GO:0030326 embryonic limb morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0030389 fructosamine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030392 fructosamine catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030534 adult behavior IEP Predict GO terms from Neighborhoods
BP GO:0030902 hindbrain development IEP Predict GO terms from Neighborhoods
BP GO:0031016 pancreas development IEP Predict GO terms from Neighborhoods
BP GO:0032355 response to estradiol IEP Predict GO terms from Neighborhoods
BP GO:0032526 response to retinoic acid IEP Predict GO terms from Neighborhoods
BP GO:0032570 response to progesterone IEP Predict GO terms from Neighborhoods
BP GO:0033189 response to vitamin A IEP Predict GO terms from Neighborhoods
BP GO:0033206 meiotic cytokinesis IEP Predict GO terms from Neighborhoods
BP GO:0033273 response to vitamin IEP Predict GO terms from Neighborhoods
BP GO:0033383 geranyl diphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033574 response to testosterone IEP Predict GO terms from Neighborhoods
BP GO:0035094 response to nicotine IEP Predict GO terms from Neighborhoods
BP GO:0035107 appendage morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0035108 limb morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0035113 embryonic appendage morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0035115 embryonic forelimb morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0035136 forelimb morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0035634 response to stilbenoid IEP Predict GO terms from Neighborhoods
BP GO:0035799 ureter maturation IEP Predict GO terms from Neighborhoods
BP GO:0036296 response to increased oxygen levels IEP Predict GO terms from Neighborhoods
BP GO:0042133 neurotransmitter metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042135 neurotransmitter catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042472 inner ear morphogenesis IEP Predict GO terms from Neighborhoods
MF GO:0042562 hormone binding IEP Predict GO terms from Neighborhoods
BP GO:0042573 retinoic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042574 retinal metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042904 9-cis-retinoic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042905 9-cis-retinoic acid metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0043878 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity IEP Predict GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0044550 secondary metabolite biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046348 amino sugar catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0047180 salutaridinol 7-O-acetyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0047461 (+)-delta-cadinene synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0048149 behavioral response to ethanol IEP Predict GO terms from Neighborhoods
BP GO:0048229 gametophyte development IEP Predict GO terms from Neighborhoods
BP GO:0048384 retinoic acid receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0048385 regulation of retinoic acid receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0048386 positive regulation of retinoic acid receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0048442 sepal development IEP Predict GO terms from Neighborhoods
BP GO:0048480 stigma development IEP Predict GO terms from Neighborhoods
BP GO:0048565 digestive tract development IEP Predict GO terms from Neighborhoods
BP GO:0048566 embryonic digestive tract development IEP Predict GO terms from Neighborhoods
BP GO:0048738 cardiac muscle tissue development IEP Predict GO terms from Neighborhoods
BP GO:0048799 animal organ maturation IEP Predict GO terms from Neighborhoods
BP GO:0048857 neural nucleus development IEP Predict GO terms from Neighborhoods
BP GO:0048864 stem cell development IEP Predict GO terms from Neighborhoods
BP GO:0050678 regulation of epithelial cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:0050727 regulation of inflammatory response IEP Predict GO terms from Neighborhoods
BP GO:0050885 neuromuscular process controlling balance IEP Predict GO terms from Neighborhoods
BP GO:0050905 neuromuscular process IEP Predict GO terms from Neighborhoods
BP GO:0055093 response to hyperoxia IEP Predict GO terms from Neighborhoods
BP GO:0060004 reflex IEP Predict GO terms from Neighborhoods
BP GO:0060013 righting reflex IEP Predict GO terms from Neighborhoods
BP GO:0060166 olfactory pit development IEP Predict GO terms from Neighborhoods
BP GO:0060324 face development IEP Predict GO terms from Neighborhoods
BP GO:0060537 muscle tissue development IEP Predict GO terms from Neighborhoods
BP GO:0060562 epithelial tube morphogenesis IEP Predict GO terms from Neighborhoods
MF GO:0070122 obsolete isopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0070324 thyroid hormone binding IEP Predict GO terms from Neighborhoods
BP GO:0070384 Harderian gland development IEP Predict GO terms from Neighborhoods
MF GO:0070403 NAD+ binding IEP Predict GO terms from Neighborhoods
MF GO:0070404 NADH binding IEP Predict GO terms from Neighborhoods
BP GO:0071300 cellular response to retinoic acid IEP Predict GO terms from Neighborhoods
BP GO:0071398 cellular response to fatty acid IEP Predict GO terms from Neighborhoods
BP GO:0090242 retinoic acid receptor signaling pathway involved in somitogenesis IEP Predict GO terms from Neighborhoods
BP GO:0090377 seed trichome initiation IEP Predict GO terms from Neighborhoods
BP GO:0097193 intrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0102801 anthocyanin 5-O-glucoside-4'''-O-malonyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0106373 3-deoxyglucosone dehydrogenase activity IEP Predict GO terms from Neighborhoods
BP GO:0110095 cellular detoxification of aldehyde IEP Predict GO terms from Neighborhoods
BP GO:1900619 acetate ester metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901576 organic substance biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901926 cadinene metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901928 cadinene biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902882 regulation of response to oxidative stress IEP Predict GO terms from Neighborhoods
BP GO:1904638 response to resveratrol IEP Predict GO terms from Neighborhoods
BP GO:1904639 cellular response to resveratrol IEP Predict GO terms from Neighborhoods
BP GO:1990641 response to iron ion starvation IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR009071 HMG_box_dom 152 219
IPR036910 HMG_box_dom_sf 139 231
No external refs found!