SOLTUB.AGRIA.G00000041629

Description : Glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein isoform 1

Gene families : OG_02_0017493 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000041629
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_72

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	IEA	AHRD
CC	GO:0005618	cell wall	IEA	AHRD
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010383	cell wall polysaccharide metabolic process	None	Extended
BP	GO:0010410	hemicellulose metabolic process	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0016998	cell wall macromolecule catabolic process	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
MF	GO:0031176	endo-1,4-beta-xylanase activity	IEA	AHRD
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0044347	cell wall polysaccharide catabolic process	None	Extended
BP	GO:0045491	xylan metabolic process	None	Extended
BP	GO:0045493	xylan catabolic process	IEA	AHRD
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097599	xylanase activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:2000895	hemicellulose catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000012	single strand break repair	IEP	Predict GO terms from Neighborhoods
MF	GO:0000285	1-phosphatidylinositol-3-phosphate 5-kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0002478	antigen processing and presentation of exogenous peptide antigen	IEP	Predict GO terms from Neighborhoods
BP	GO:0002495	antigen processing and presentation of peptide antigen via MHC class II	IEP	Predict GO terms from Neighborhoods
BP	GO:0002504	antigen processing and presentation of peptide or polysaccharide antigen via MHC class II	IEP	Predict GO terms from Neighborhoods
MF	GO:0003697	single-stranded DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003714	transcription corepressor activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005794	Golgi apparatus	IEP	Predict GO terms from Neighborhoods
BP	GO:0006302	double-strand break repair	IEP	Predict GO terms from Neighborhoods
BP	GO:0006486	protein glycosylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006487	protein N-linked glycosylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006612	protein targeting to membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0006661	phosphatidylinositol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006810	transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006873	cellular ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006885	regulation of pH	IEP	Predict GO terms from Neighborhoods
BP	GO:0006898	receptor-mediated endocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006906	vesicle fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0007035	vacuolar acidification	IEP	Predict GO terms from Neighborhoods
BP	GO:0007041	lysosomal transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0008333	endosome to lysosome transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0008417	fucosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008553	P-type proton-exporting transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0009678	pyrophosphate hydrolysis-driven proton transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010023	proanthocyanidin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010118	stomatal movement	IEP	Predict GO terms from Neighborhoods
BP	GO:0010256	endomembrane system organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0010493	Lewis a epitope biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0015662	P-type ion transporter activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0016020	membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0016032	viral process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016192	vesicle-mediated transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0016307	phosphatidylinositol phosphate kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016308	1-phosphatidylinositol-4-phosphate 5-kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016477	cell migration	IEP	Predict GO terms from Neighborhoods
BP	GO:0016482	cytosolic transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0016757	glycosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Predict GO terms from Neighborhoods
MF	GO:0017005	3'-tyrosyl-DNA phosphodiesterase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0018105	peptidyl-serine phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0018209	peptidyl-serine modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0019065	receptor-mediated endocytosis of virus by host cell	IEP	Predict GO terms from Neighborhoods
BP	GO:0019725	cellular homeostasis	IEP	Predict GO terms from Neighborhoods
MF	GO:0019829	ATPase-coupled cation transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019882	antigen processing and presentation	IEP	Predict GO terms from Neighborhoods
BP	GO:0019884	antigen processing and presentation of exogenous antigen	IEP	Predict GO terms from Neighborhoods
BP	GO:0019886	antigen processing and presentation of exogenous peptide antigen via MHC class II	IEP	Predict GO terms from Neighborhoods
BP	GO:0030003	cellular cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030004	cellular monovalent inorganic cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030593	neutrophil chemotaxis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030595	leukocyte chemotaxis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030641	regulation of cellular pH	IEP	Predict GO terms from Neighborhoods
CC	GO:0030666	endocytic vesicle membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0030670	phagocytic vesicle membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031090	organelle membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031901	early endosome membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031902	late endosome membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0032288	myelin assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0032438	melanosome organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0032984	protein-containing complex disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0034504	protein localization to nucleus	IEP	Predict GO terms from Neighborhoods
MF	GO:0034593	phosphatidylinositol bisphosphate phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0034595	phosphatidylinositol phosphate 5-phosphatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0036289	peptidyl-serine autophosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0042147	retrograde transport, endosome to Golgi	IEP	Predict GO terms from Neighborhoods
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0043226	organelle	IEP	Predict GO terms from Neighborhoods
CC	GO:0043227	membrane-bounded organelle	IEP	Predict GO terms from Neighborhoods
CC	GO:0043229	intracellular organelle	IEP	Predict GO terms from Neighborhoods
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Predict GO terms from Neighborhoods
BP	GO:0043413	macromolecule glycosylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0043813	phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0044088	regulation of vacuole organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0045017	glycerolipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0045121	membrane raft	IEP	Predict GO terms from Neighborhoods
BP	GO:0046189	phenol-containing compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046474	glycerophospholipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046794	transport of virus	IEP	Predict GO terms from Neighborhoods
BP	GO:0046854	phosphatidylinositol phosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046907	intracellular transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0046920	alpha-(1->3)-fucosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048002	antigen processing and presentation of peptide antigen	IEP	Predict GO terms from Neighborhoods
BP	GO:0048284	organelle fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0048753	pigment granule organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0050801	ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0050829	defense response to Gram-negative bacterium	IEP	Predict GO terms from Neighborhoods
BP	GO:0050900	leukocyte migration	IEP	Predict GO terms from Neighborhoods
BP	GO:0051452	intracellular pH reduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0051453	regulation of intracellular pH	IEP	Predict GO terms from Neighborhoods
BP	GO:0051649	establishment of localization in cell	IEP	Predict GO terms from Neighborhoods
MF	GO:0052742	phosphatidylinositol kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0052810	1-phosphatidylinositol-5-kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0052866	phosphatidylinositol phosphate phosphatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0055067	monovalent inorganic cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055080	cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055082	cellular chemical homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0060326	cell chemotaxis	IEP	Predict GO terms from Neighborhoods
BP	GO:0061025	membrane fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0070085	glycosylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0070259	tyrosyl-DNA phosphodiesterase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0071621	granulocyte chemotaxis	IEP	Predict GO terms from Neighborhoods
BP	GO:0075509	endocytosis involved in viral entry into host cell	IEP	Predict GO terms from Neighborhoods
BP	GO:0090150	establishment of protein localization to membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0090174	organelle membrane fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0090332	stomatal closure	IEP	Predict GO terms from Neighborhoods
BP	GO:0090383	phagosome acidification	IEP	Predict GO terms from Neighborhoods
BP	GO:0090385	phagosome-lysosome fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0097352	autophagosome maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:0097529	myeloid leukocyte migration	IEP	Predict GO terms from Neighborhoods
BP	GO:0097530	granulocyte migration	IEP	Predict GO terms from Neighborhoods
BP	GO:0098771	inorganic ion homeostasis	IEP	Predict GO terms from Neighborhoods
CC	GO:0098857	membrane microdomain	IEP	Predict GO terms from Neighborhoods
MF	GO:0106018	phosphatidylinositol-3,5-bisphosphate phosphatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0120029	proton export across plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0140115	export across plasma membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0140358	P-type transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1902115	regulation of organelle assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:1902600	proton transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1903100	1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903426	regulation of reactive oxygen species biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1904562	phosphatidylinositol 5-phosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1905161	protein localization to phagocytic vesicle	IEP	Predict GO terms from Neighborhoods
BP	GO:1990069	stomatal opening	IEP	Predict GO terms from Neighborhoods
BP	GO:1990266	neutrophil migration	IEP	Predict GO terms from Neighborhoods
BP	GO:2000785	regulation of autophagosome assembly	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001000	GH10_dom	579	835
IPR003305	CenC_carb-bd	35	174
IPR003305	CenC_carb-bd	379	519
IPR003305	CenC_carb-bd	208	344
IPR008979	Galactose-bd-like_sf	206	359
IPR008979	Galactose-bd-like_sf	34	190
IPR017853	Glycoside_hydrolase_SF	568	871
IPR008979	Galactose-bd-like_sf	377	536

External Links

No external refs found!

SOLTUB.AGRIA.G00000041629

Expression Profile

Co-expression Networks

Functional Annotation