SOLTUB.AGRIA.G00000041663


Description : F-box-like/WD repeat-containing protein


Gene families : OG_02_0000659 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000041663
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_17


Type GO Term Name Evidence Source
CC GO:0000118 histone deacetylase complex IEA AHRD
BP GO:0000122 negative regulation of transcription by RNA polymerase II IEA AHRD
MF GO:0000976 transcription cis-regulatory region binding IEA AHRD
BP GO:0001835 blastocyst hatching IEA AHRD
BP GO:0002021 response to dietary excess IEA AHRD
MF GO:0003682 chromatin binding IEA AHRD
MF GO:0003714 transcription corepressor activity IEA AHRD
CC GO:0005700 polytene chromosome IEA AHRD
BP GO:0006928 obsolete movement of cell or subcellular component IEA AHRD
BP GO:0006979 response to oxidative stress IEA AHRD
BP GO:0007017 microtubule-based process IEA AHRD
BP GO:0007605 sensory perception of sound IEA AHRD
MF GO:0008013 beta-catenin binding IEA AHRD
MF GO:0008022 protein C-terminus binding IEA AHRD
BP GO:0008587 imaginal disc-derived wing margin morphogenesis IEA AHRD
BP GO:0009409 response to cold IEA AHRD
BP GO:0016042 lipid catabolic process IEA AHRD
MF GO:0016301 kinase activity IEA AHRD
CC GO:0017053 transcription repressor complex IEA AHRD
MF GO:0019904 protein domain specific binding IEA AHRD
BP GO:0022416 chaeta development IEA AHRD
BP GO:0031065 positive regulation of histone deacetylation IEA AHRD
BP GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA AHRD
BP GO:0035264 multicellular organism growth IEA AHRD
BP GO:0042058 regulation of epidermal growth factor receptor signaling pathway IEA AHRD
MF GO:0042393 histone binding IEA AHRD
BP GO:0042461 photoreceptor cell development IEA AHRD
MF GO:0042802 identical protein binding IEA AHRD
BP GO:0043524 negative regulation of neuron apoptotic process IEA AHRD
BP GO:0043627 response to estrogen IEA AHRD
BP GO:0045572 positive regulation of imaginal disc growth IEA AHRD
BP GO:0045747 positive regulation of Notch signaling pathway IEA AHRD
BP GO:0045944 positive regulation of transcription by RNA polymerase II IEA AHRD
BP GO:0046329 negative regulation of JNK cascade IEA AHRD
MF GO:0047485 protein N-terminus binding IEA AHRD
BP GO:0048545 response to steroid hormone IEA AHRD
BP GO:0050821 protein stabilization IEA AHRD
BP GO:0050872 white fat cell differentiation IEA AHRD
BP GO:0051179 localization IEA AHRD
BP GO:0060271 cilium assembly IEA AHRD
BP GO:0060613 fat pad development IEA AHRD
BP GO:0070050 neuron cellular homeostasis IEA AHRD
BP GO:0071482 cellular response to light stimulus IEA AHRD
CC GO:0072686 mitotic spindle IEA AHRD
BP GO:0090207 regulation of triglyceride metabolic process IEA AHRD
BP GO:0090263 positive regulation of canonical Wnt signaling pathway IEA AHRD
MF GO:0140297 DNA-binding transcription factor binding IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000027 ribosomal large subunit assembly IEP Predict GO terms from Neighborhoods
BP GO:0001101 response to acid chemical IEP Predict GO terms from Neighborhoods
BP GO:0002064 epithelial cell development IEP Predict GO terms from Neighborhoods
MF GO:0004021 L-alanine:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004838 L-tyrosine:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0005789 endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
BP GO:0006082 organic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006284 base-excision repair IEP Predict GO terms from Neighborhoods
BP GO:0007289 spermatid nucleus differentiation IEP Predict GO terms from Neighborhoods
BP GO:0007389 pattern specification process IEP Predict GO terms from Neighborhoods
BP GO:0007596 blood coagulation IEP Predict GO terms from Neighborhoods
BP GO:0007599 hemostasis IEP Predict GO terms from Neighborhoods
MF GO:0008143 poly(A) binding IEP Predict GO terms from Neighborhoods
BP GO:0008154 actin polymerization or depolymerization IEP Predict GO terms from Neighborhoods
MF GO:0008483 transaminase activity IEP Predict GO terms from Neighborhoods
MF GO:0008494 translation activator activity IEP Predict GO terms from Neighborhoods
MF GO:0008793 aromatic-amino-acid:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0009413 response to flooding IEP Predict GO terms from Neighborhoods
BP GO:0009415 response to water IEP Predict GO terms from Neighborhoods
CC GO:0009524 phragmoplast IEP Predict GO terms from Neighborhoods
BP GO:0009566 fertilization IEP Predict GO terms from Neighborhoods
BP GO:0009567 double fertilization forming a zygote and endosperm IEP Predict GO terms from Neighborhoods
BP GO:0009606 tropism IEP Predict GO terms from Neighborhoods
BP GO:0009629 response to gravity IEP Predict GO terms from Neighborhoods
BP GO:0009630 gravitropism IEP Predict GO terms from Neighborhoods
BP GO:0009639 response to red or far red light IEP Predict GO terms from Neighborhoods
BP GO:0009641 shade avoidance IEP Predict GO terms from Neighborhoods
BP GO:0009648 photoperiodism IEP Predict GO terms from Neighborhoods
BP GO:0009683 indoleacetic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009684 indoleacetic acid biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0009705 plant-type vacuole membrane IEP Predict GO terms from Neighborhoods
BP GO:0009723 response to ethylene IEP Predict GO terms from Neighborhoods
BP GO:0009735 response to cytokinin IEP Predict GO terms from Neighborhoods
BP GO:0009742 brassinosteroid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009791 post-embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0009792 embryo development ending in birth or egg hatching IEP Predict GO terms from Neighborhoods
BP GO:0009838 abscission IEP Predict GO terms from Neighborhoods
BP GO:0009850 auxin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009851 auxin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009900 dehiscence IEP Predict GO terms from Neighborhoods
BP GO:0009901 anther dehiscence IEP Predict GO terms from Neighborhoods
BP GO:0009914 hormone transport IEP Predict GO terms from Neighborhoods
BP GO:0009926 auxin polar transport IEP Predict GO terms from Neighborhoods
BP GO:0009958 positive gravitropism IEP Predict GO terms from Neighborhoods
BP GO:0010035 response to inorganic substance IEP Predict GO terms from Neighborhoods
BP GO:0010051 xylem and phloem pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010074 maintenance of meristem identity IEP Predict GO terms from Neighborhoods
BP GO:0010078 maintenance of root meristem identity IEP Predict GO terms from Neighborhoods
BP GO:0010087 phloem or xylem histogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010116 positive regulation of abscisic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010256 endomembrane system organization IEP Predict GO terms from Neighborhoods
MF GO:0010326 methionine-oxo-acid transaminase activity IEP Predict GO terms from Neighborhoods
BP GO:0010588 cotyledon vascular tissue pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010600 regulation of auxin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010817 regulation of hormone levels IEP Predict GO terms from Neighborhoods
BP GO:0016053 organic acid biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predict GO terms from Neighborhoods
MF GO:0016829 lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016830 carbon-carbon lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016831 carboxy-lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016846 carbon-sulfur lyase activity IEP Predict GO terms from Neighborhoods
BP GO:0018130 heterocycle biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019827 stem cell population maintenance IEP Predict GO terms from Neighborhoods
MF GO:0019842 vitamin binding IEP Predict GO terms from Neighborhoods
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP Predict GO terms from Neighborhoods
BP GO:0022414 reproductive process IEP Predict GO terms from Neighborhoods
BP GO:0030042 actin filament depolymerization IEP Predict GO terms from Neighborhoods
MF GO:0030170 pyridoxal phosphate binding IEP Predict GO terms from Neighborhoods
MF GO:0030295 protein kinase activator activity IEP Predict GO terms from Neighborhoods
CC GO:0030425 dendrite IEP Predict GO terms from Neighborhoods
BP GO:0030707 ovarian follicle cell development IEP Predict GO terms from Neighborhoods
MF GO:0031370 eukaryotic initiation factor 4G binding IEP Predict GO terms from Neighborhoods
MF GO:0031404 chloride ion binding IEP Predict GO terms from Neighborhoods
BP GO:0031669 cellular response to nutrient levels IEP Predict GO terms from Neighborhoods
BP GO:0031952 regulation of protein autophosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0032350 regulation of hormone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032787 monocarboxylic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034754 cellular hormone metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0034973 Sid2-Mob1 complex IEP Predict GO terms from Neighborhoods
BP GO:0035265 organ growth IEP Predict GO terms from Neighborhoods
BP GO:0035330 regulation of hippo signaling IEP Predict GO terms from Neighborhoods
BP GO:0042430 indole-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042435 indole-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042445 hormone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042446 hormone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042754 negative regulation of circadian rhythm IEP Predict GO terms from Neighborhoods
BP GO:0043009 chordate embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0043401 steroid hormone mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0043436 oxoacid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043562 cellular response to nitrogen levels IEP Predict GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0044283 small molecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0045069 regulation of viral genome replication IEP Predict GO terms from Neighborhoods
BP GO:0045070 positive regulation of viral genome replication IEP Predict GO terms from Neighborhoods
MF GO:0045544 gibberellin 20-oxidase activity IEP Predict GO terms from Neighborhoods
BP GO:0046394 carboxylic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046686 response to cadmium ion IEP Predict GO terms from Neighborhoods
BP GO:0046885 regulation of hormone biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0047312 L-phenylalanine:pyruvate aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0047434 indolepyruvate decarboxylase activity IEP Predict GO terms from Neighborhoods
MF GO:0047635 alanine-oxo-acid transaminase activity IEP Predict GO terms from Neighborhoods
MF GO:0047654 alliin lyase activity IEP Predict GO terms from Neighborhoods
BP GO:0048235 pollen sperm cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0048262 determination of dorsal/ventral asymmetry IEP Predict GO terms from Neighborhoods
BP GO:0048364 root development IEP Predict GO terms from Neighborhoods
BP GO:0048438 floral whorl development IEP Predict GO terms from Neighborhoods
BP GO:0048467 gynoecium development IEP Predict GO terms from Neighborhoods
BP GO:0048527 lateral root development IEP Predict GO terms from Neighborhoods
BP GO:0048528 post-embryonic root development IEP Predict GO terms from Neighborhoods
BP GO:0048573 photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048599 oocyte development IEP Predict GO terms from Neighborhoods
BP GO:0048609 multicellular organismal reproductive process IEP Predict GO terms from Neighborhoods
MF GO:0050048 L-leucine:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0050362 L-tryptophan:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0050817 coagulation IEP Predict GO terms from Neighborhoods
BP GO:0051261 protein depolymerization IEP Predict GO terms from Neighborhoods
BP GO:0051354 negative regulation of oxidoreductase activity IEP Predict GO terms from Neighborhoods
BP GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening IEP Predict GO terms from Neighborhoods
BP GO:0060212 negative regulation of nuclear-transcribed mRNA poly(A) tail shortening IEP Predict GO terms from Neighborhoods
BP GO:0060213 positive regulation of nuclear-transcribed mRNA poly(A) tail shortening IEP Predict GO terms from Neighborhoods
BP GO:0060918 auxin transport IEP Predict GO terms from Neighborhoods
MF GO:0070180 large ribosomal subunit rRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0070279 vitamin B6 binding IEP Predict GO terms from Neighborhoods
MF GO:0070529 L-tryptophan aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0070546 L-phenylalanine aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0070547 L-tyrosine aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0070548 L-glutamine aminotransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0070670 response to interleukin-4 IEP Predict GO terms from Neighborhoods
BP GO:0071353 cellular response to interleukin-4 IEP Predict GO terms from Neighborhoods
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0080022 primary root development IEP Predict GO terms from Neighborhoods
MF GO:0080097 L-tryptophan:pyruvate aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0080098 L-tyrosine:pyruvate aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0080099 L-methionine:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0080100 L-glutamine:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0080130 L-phenylalanine:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0090354 regulation of auxin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090693 plant organ senescence IEP Predict GO terms from Neighborhoods
BP GO:0090696 post-embryonic plant organ development IEP Predict GO terms from Neighborhoods
BP GO:0098727 maintenance of cell number IEP Predict GO terms from Neighborhoods
BP GO:0099402 plant organ development IEP Predict GO terms from Neighborhoods
MF GO:0103075 indole-3-pyruvate monooxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:1900151 regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay IEP Predict GO terms from Neighborhoods
BP GO:1900152 negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay IEP Predict GO terms from Neighborhoods
BP GO:1900153 positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay IEP Predict GO terms from Neighborhoods
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1905615 positive regulation of developmental vegetative growth IEP Predict GO terms from Neighborhoods
CC GO:1990124 messenger ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
BP GO:2000024 regulation of leaf development IEP Predict GO terms from Neighborhoods
BP GO:2000468 regulation of peroxidase activity IEP Predict GO terms from Neighborhoods
BP GO:2000469 negative regulation of peroxidase activity IEP Predict GO terms from Neighborhoods
BP GO:2000622 regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predict GO terms from Neighborhoods
BP GO:2000623 negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006594 LisH 32 56
IPR036322 WD40_repeat_dom_sf 171 475
IPR001680 WD40_repeat 398 435
IPR001680 WD40_repeat 265 302
IPR001680 WD40_repeat 234 261
IPR001680 WD40_repeat 348 393
IPR001680 WD40_repeat 171 205
No external refs found!