SOLTUB.AGRIA.G00000041715


Description : F-box-like/WD repeat-containing protein


Gene families : OG_02_0000659 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000041715
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_17

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000041671 No alias F-box-like/WD repeat-containing protein 0.13 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000041671 No alias F-box-like/WD repeat-containing protein 0.13 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000041671 No alias F-box-like/WD repeat-containing protein 0.13 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source
CC GO:0000118 histone deacetylase complex IEA AHRD
BP GO:0000122 negative regulation of transcription by RNA polymerase II IEA AHRD
MF GO:0000976 transcription cis-regulatory region binding IEA AHRD
BP GO:0001835 blastocyst hatching IEA AHRD
BP GO:0002021 response to dietary excess IEA AHRD
MF GO:0003682 chromatin binding IEA AHRD
MF GO:0003714 transcription corepressor activity IEA AHRD
CC GO:0005700 polytene chromosome IEA AHRD
CC GO:0005737 cytoplasm IEA AHRD
BP GO:0006979 response to oxidative stress IEA AHRD
BP GO:0007605 sensory perception of sound IEA AHRD
MF GO:0008013 beta-catenin binding IEA AHRD
MF GO:0008022 protein C-terminus binding IEA AHRD
BP GO:0008587 imaginal disc-derived wing margin morphogenesis IEA AHRD
BP GO:0009409 response to cold IEA AHRD
BP GO:0016042 lipid catabolic process IEA AHRD
BP GO:0016573 histone acetylation IEA AHRD
CC GO:0017053 transcription repressor complex IEA AHRD
MF GO:0019904 protein domain specific binding IEA AHRD
BP GO:0022416 chaeta development IEA AHRD
BP GO:0031065 positive regulation of histone deacetylation IEA AHRD
BP GO:0032259 methylation IEA AHRD
BP GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA AHRD
CC GO:0035097 histone methyltransferase complex IEA AHRD
BP GO:0035264 multicellular organism growth IEA AHRD
CC GO:0036064 ciliary basal body IEA AHRD
BP GO:0036158 outer dynein arm assembly IEA AHRD
BP GO:0042058 regulation of epidermal growth factor receptor signaling pathway IEA AHRD
BP GO:0042073 intraciliary transport IEA AHRD
MF GO:0042393 histone binding IEA AHRD
BP GO:0042461 photoreceptor cell development IEA AHRD
MF GO:0042802 identical protein binding IEA AHRD
BP GO:0043524 negative regulation of neuron apoptotic process IEA AHRD
BP GO:0043627 response to estrogen IEA AHRD
BP GO:0045572 positive regulation of imaginal disc growth IEA AHRD
BP GO:0045747 positive regulation of Notch signaling pathway IEA AHRD
BP GO:0045944 positive regulation of transcription by RNA polymerase II IEA AHRD
BP GO:0046329 negative regulation of JNK cascade IEA AHRD
MF GO:0047485 protein N-terminus binding IEA AHRD
BP GO:0048545 response to steroid hormone IEA AHRD
BP GO:0050821 protein stabilization IEA AHRD
BP GO:0050872 white fat cell differentiation IEA AHRD
BP GO:0060613 fat pad development IEA AHRD
BP GO:0070050 neuron cellular homeostasis IEA AHRD
BP GO:0071482 cellular response to light stimulus IEA AHRD
CC GO:0072686 mitotic spindle IEA AHRD
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEA AHRD
BP GO:0090207 regulation of triglyceride metabolic process IEA AHRD
BP GO:0090263 positive regulation of canonical Wnt signaling pathway IEA AHRD
MF GO:0140297 DNA-binding transcription factor binding IEA AHRD
CC GO:1902562 H4 histone acetyltransferase complex IEA AHRD
Type GO Term Name Evidence Source
MF GO:0004021 L-alanine:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004838 L-tyrosine:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008483 transaminase activity IEP Predict GO terms from Neighborhoods
MF GO:0008793 aromatic-amino-acid:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0009683 indoleacetic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009684 indoleacetic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009723 response to ethylene IEP Predict GO terms from Neighborhoods
BP GO:0009851 auxin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010078 maintenance of root meristem identity IEP Predict GO terms from Neighborhoods
BP GO:0010185 regulation of cellular defense response IEP Predict GO terms from Neighborhoods
MF GO:0010326 methionine-oxo-acid transaminase activity IEP Predict GO terms from Neighborhoods
BP GO:0010588 cotyledon vascular tissue pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010917 negative regulation of mitochondrial membrane potential IEP Predict GO terms from Neighborhoods
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predict GO terms from Neighborhoods
MF GO:0016846 carbon-sulfur lyase activity IEP Predict GO terms from Neighborhoods
BP GO:0035966 response to topologically incorrect protein IEP Predict GO terms from Neighborhoods
BP GO:0035967 cellular response to topologically incorrect protein IEP Predict GO terms from Neighborhoods
BP GO:0042391 regulation of membrane potential IEP Predict GO terms from Neighborhoods
BP GO:0043433 negative regulation of DNA-binding transcription factor activity IEP Predict GO terms from Neighborhoods
BP GO:0043562 cellular response to nitrogen levels IEP Predict GO terms from Neighborhoods
BP GO:0044092 negative regulation of molecular function IEP Predict GO terms from Neighborhoods
BP GO:0045837 negative regulation of membrane potential IEP Predict GO terms from Neighborhoods
MF GO:0047312 L-phenylalanine:pyruvate aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0047635 alanine-oxo-acid transaminase activity IEP Predict GO terms from Neighborhoods
BP GO:0048438 floral whorl development IEP Predict GO terms from Neighborhoods
BP GO:0048467 gynoecium development IEP Predict GO terms from Neighborhoods
BP GO:0048527 lateral root development IEP Predict GO terms from Neighborhoods
BP GO:0048528 post-embryonic root development IEP Predict GO terms from Neighborhoods
MF GO:0050048 L-leucine:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0050362 L-tryptophan:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0051245 negative regulation of cellular defense response IEP Predict GO terms from Neighborhoods
BP GO:0051341 regulation of oxidoreductase activity IEP Predict GO terms from Neighborhoods
BP GO:0051354 negative regulation of oxidoreductase activity IEP Predict GO terms from Neighborhoods
BP GO:0051788 response to misfolded protein IEP Predict GO terms from Neighborhoods
BP GO:0051881 regulation of mitochondrial membrane potential IEP Predict GO terms from Neighborhoods
BP GO:0065009 regulation of molecular function IEP Predict GO terms from Neighborhoods
MF GO:0070529 L-tryptophan aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0070546 L-phenylalanine aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0070547 L-tyrosine aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0070548 L-glutamine aminotransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0071218 cellular response to misfolded protein IEP Predict GO terms from Neighborhoods
MF GO:0080097 L-tryptophan:pyruvate aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0080098 L-tyrosine:pyruvate aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0080099 L-methionine:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0080100 L-glutamine:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0080130 L-phenylalanine:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0090696 post-embryonic plant organ development IEP Predict GO terms from Neighborhoods
BP GO:2000468 regulation of peroxidase activity IEP Predict GO terms from Neighborhoods
BP GO:2000469 negative regulation of peroxidase activity IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006594 LisH 30 56
IPR001680 WD40_repeat 265 302
IPR001680 WD40_repeat 234 261
IPR001680 WD40_repeat 171 205
IPR036322 WD40_repeat_dom_sf 170 357
No external refs found!