SOLTUB.AGRIA.G00000041721


Description : F-box-like/WD repeat-containing protein


Gene families : OG_02_0000659 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000041721
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_107


Type GO Term Name Evidence Source
CC GO:0000118 histone deacetylase complex IEA AHRD
BP GO:0000122 negative regulation of transcription by RNA polymerase II IEA AHRD
MF GO:0000976 transcription cis-regulatory region binding IEA AHRD
BP GO:0001835 blastocyst hatching IEA AHRD
BP GO:0002021 response to dietary excess IEA AHRD
MF GO:0003682 chromatin binding IEA AHRD
MF GO:0003714 transcription corepressor activity IEA AHRD
CC GO:0005700 polytene chromosome IEA AHRD
CC GO:0005737 cytoplasm IEA AHRD
BP GO:0006979 response to oxidative stress IEA AHRD
BP GO:0007605 sensory perception of sound IEA AHRD
MF GO:0008013 beta-catenin binding IEA AHRD
MF GO:0008022 protein C-terminus binding IEA AHRD
BP GO:0008587 imaginal disc-derived wing margin morphogenesis IEA AHRD
BP GO:0009409 response to cold IEA AHRD
BP GO:0016042 lipid catabolic process IEA AHRD
BP GO:0016573 histone acetylation IEA AHRD
CC GO:0017053 transcription repressor complex IEA AHRD
MF GO:0019904 protein domain specific binding IEA AHRD
BP GO:0022416 chaeta development IEA AHRD
BP GO:0031065 positive regulation of histone deacetylation IEA AHRD
BP GO:0032259 methylation IEA AHRD
BP GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA AHRD
CC GO:0035097 histone methyltransferase complex IEA AHRD
BP GO:0035264 multicellular organism growth IEA AHRD
CC GO:0036064 ciliary basal body IEA AHRD
BP GO:0036158 outer dynein arm assembly IEA AHRD
BP GO:0042058 regulation of epidermal growth factor receptor signaling pathway IEA AHRD
BP GO:0042073 intraciliary transport IEA AHRD
MF GO:0042393 histone binding IEA AHRD
BP GO:0042461 photoreceptor cell development IEA AHRD
MF GO:0042802 identical protein binding IEA AHRD
BP GO:0043524 negative regulation of neuron apoptotic process IEA AHRD
BP GO:0043627 response to estrogen IEA AHRD
BP GO:0045572 positive regulation of imaginal disc growth IEA AHRD
BP GO:0045747 positive regulation of Notch signaling pathway IEA AHRD
BP GO:0045944 positive regulation of transcription by RNA polymerase II IEA AHRD
BP GO:0046329 negative regulation of JNK cascade IEA AHRD
MF GO:0047485 protein N-terminus binding IEA AHRD
BP GO:0048545 response to steroid hormone IEA AHRD
BP GO:0050821 protein stabilization IEA AHRD
BP GO:0050872 white fat cell differentiation IEA AHRD
BP GO:0060613 fat pad development IEA AHRD
BP GO:0070050 neuron cellular homeostasis IEA AHRD
BP GO:0071482 cellular response to light stimulus IEA AHRD
CC GO:0072686 mitotic spindle IEA AHRD
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEA AHRD
BP GO:0090207 regulation of triglyceride metabolic process IEA AHRD
BP GO:0090263 positive regulation of canonical Wnt signaling pathway IEA AHRD
MF GO:0140297 DNA-binding transcription factor binding IEA AHRD
CC GO:1902562 H4 histone acetyltransferase complex IEA AHRD
Type GO Term Name Evidence Source
CC GO:0000124 SAGA complex IEP Predict GO terms from Neighborhoods
BP GO:0001756 somitogenesis IEP Predict GO terms from Neighborhoods
BP GO:0001822 kidney development IEP Predict GO terms from Neighborhoods
BP GO:0001826 inner cell mass cell differentiation IEP Predict GO terms from Neighborhoods
CC GO:0005669 transcription factor TFIID complex IEP Predict GO terms from Neighborhoods
BP GO:0006352 DNA-templated transcription initiation IEP Predict GO terms from Neighborhoods
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP Predict GO terms from Neighborhoods
BP GO:0009952 anterior/posterior pattern specification IEP Predict GO terms from Neighborhoods
BP GO:0010185 regulation of cellular defense response IEP Predict GO terms from Neighborhoods
BP GO:0010466 negative regulation of peptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0010951 negative regulation of endopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predict GO terms from Neighborhoods
MF GO:0032182 ubiquitin-like protein binding IEP Predict GO terms from Neighborhoods
BP GO:0035282 segmentation IEP Predict GO terms from Neighborhoods
BP GO:0042273 ribosomal large subunit biogenesis IEP Predict GO terms from Neighborhoods
MF GO:0043130 ubiquitin binding IEP Predict GO terms from Neighborhoods
BP GO:0043154 negative regulation of cysteine-type endopeptidase activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043281 regulation of cysteine-type endopeptidase activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043433 negative regulation of DNA-binding transcription factor activity IEP Predict GO terms from Neighborhoods
BP GO:0044085 cellular component biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0044092 negative regulation of molecular function IEP Predict GO terms from Neighborhoods
BP GO:0045861 negative regulation of proteolysis IEP Predict GO terms from Neighborhoods
BP GO:0045930 negative regulation of mitotic cell cycle IEP Predict GO terms from Neighborhoods
CC GO:0046695 SLIK (SAGA-like) complex IEP Predict GO terms from Neighborhoods
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048705 skeletal system morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048872 homeostasis of number of cells IEP Predict GO terms from Neighborhoods
BP GO:0051090 regulation of DNA-binding transcription factor activity IEP Predict GO terms from Neighborhoods
BP GO:0051245 negative regulation of cellular defense response IEP Predict GO terms from Neighborhoods
BP GO:0051346 negative regulation of hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0052547 regulation of peptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0052548 regulation of endopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0061484 hematopoietic stem cell homeostasis IEP Predict GO terms from Neighborhoods
CC GO:0070461 SAGA-type complex IEP Predict GO terms from Neighborhoods
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Predict GO terms from Neighborhoods
CC GO:1905368 peptidase complex IEP Predict GO terms from Neighborhoods
BP GO:2000116 regulation of cysteine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:2000117 negative regulation of cysteine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:2001233 regulation of apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001234 negative regulation of apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001267 regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001268 negative regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006594 LisH 30 54
IPR036322 WD40_repeat_dom_sf 167 355
IPR001680 WD40_repeat 169 203
IPR001680 WD40_repeat 263 300
IPR001680 WD40_repeat 232 259
No external refs found!