SOLTUB.AGRIA.G00000041952

Description : Cationic amino acid transporter

Gene families : OG_02_0007111 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000041952
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_62

Type	GO Term	Name	Evidence	Source
BP	GO:0003333	amino acid transmembrane transport	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005313	L-glutamate transmembrane transporter activity	IEA	AHRD
MF	GO:0005342	organic acid transmembrane transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005774	vacuolar membrane	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0006820	anion transport	None	Extended
BP	GO:0006865	amino acid transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	cation transmembrane transporter activity	None	Extended
MF	GO:0008509	anion transmembrane transporter activity	None	Extended
MF	GO:0008514	organic anion transmembrane transporter activity	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009624	response to nematode	IEA	AHRD
CC	GO:0009705	plant-type vacuole membrane	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
CC	GO:0012505	endomembrane system	IEA	AHRD
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015171	amino acid transmembrane transporter activity	None	Extended
MF	GO:0015172	acidic amino acid transmembrane transporter activity	None	Extended
MF	GO:0015174	basic amino acid transmembrane transporter activity	None	Extended
MF	GO:0015179	L-amino acid transmembrane transporter activity	None	Extended
MF	GO:0015189	L-lysine transmembrane transporter activity	IEA	AHRD
BP	GO:0015711	organic anion transport	None	Extended
BP	GO:0015802	basic amino acid transport	None	Extended
BP	GO:0015807	L-amino acid transport	None	Extended
BP	GO:0015849	organic acid transport	None	Extended
CC	GO:0016020	membrane	None	Extended
CC	GO:0016021	integral component of membrane	IEA	AHRD
MF	GO:0022857	transmembrane transporter activity	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0031967	organelle envelope	IEA	AHRD
CC	GO:0031975	envelope	None	Extended
BP	GO:0034220	ion transmembrane transport	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0046942	carboxylic acid transport	None	Extended
MF	GO:0046943	carboxylic acid transmembrane transporter activity	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050789	regulation of biological process	IEA	AHRD
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0080144	amino acid homeostasis	IEA	AHRD
BP	GO:0089718	amino acid import across plasma membrane	IEA	AHRD
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0098590	plasma membrane region	IEA	AHRD
BP	GO:0098655	cation transmembrane transport	None	Extended
BP	GO:0098656	anion transmembrane transport	None	Extended
BP	GO:0098657	import into cell	None	Extended
BP	GO:0098739	import across plasma membrane	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1902022	L-lysine transport	None	Extended
BP	GO:1902475	L-alpha-amino acid transmembrane transport	None	Extended
BP	GO:1903401	L-lysine transmembrane transport	IEA	AHRD
BP	GO:1903825	organic acid transmembrane transport	None	Extended
BP	GO:1905039	carboxylic acid transmembrane transport	None	Extended
BP	GO:1990822	basic amino acid transmembrane transport	IEA	AHRD

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Type	GO Term	Name	Evidence	Source
MF	GO:0000217	DNA secondary structure binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0000329	fungal-type vacuole membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0000987	cis-regulatory region sequence-specific DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0001216	DNA-binding transcription activator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0001403	invasive growth in response to glucose limitation	IEP	Predict GO terms from Neighborhoods
MF	GO:0004016	adenylate cyclase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004529	exodeoxyribonuclease activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004536	deoxyribonuclease activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005657	replication fork	IEP	Predict GO terms from Neighborhoods
BP	GO:0006259	DNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006260	DNA replication	IEP	Predict GO terms from Neighborhoods
BP	GO:0006261	DNA-templated DNA replication	IEP	Predict GO terms from Neighborhoods
BP	GO:0006476	protein deacetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006878	cellular copper ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006909	phagocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0007035	vacuolar acidification	IEP	Predict GO terms from Neighborhoods
BP	GO:0007042	lysosomal lumen acidification	IEP	Predict GO terms from Neighborhoods
BP	GO:0007124	pseudohyphal growth	IEP	Predict GO terms from Neighborhoods
MF	GO:0008296	3'-5'-exodeoxyribonuclease activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0008361	regulation of cell size	IEP	Predict GO terms from Neighborhoods
MF	GO:0008408	3'-5' exonuclease activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009306	protein secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0009735	response to cytokinin	IEP	Predict GO terms from Neighborhoods
BP	GO:0009739	response to gibberellin	IEP	Predict GO terms from Neighborhoods
BP	GO:0009962	regulation of flavonoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010029	regulation of seed germination	IEP	Predict GO terms from Neighborhoods
BP	GO:0010229	inflorescence development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010252	auxin homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010259	multicellular organism aging	IEP	Predict GO terms from Neighborhoods
BP	GO:0016043	cellular component organization	IEP	Predict GO terms from Neighborhoods
MF	GO:0016151	nickel cation binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0016575	histone deacetylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0016796	exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Predict GO terms from Neighborhoods
MF	GO:0016832	aldehyde-lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016895	exodeoxyribonuclease activity, producing 5'-phosphomonoesters	IEP	Predict GO terms from Neighborhoods
BP	GO:0019954	asexual reproduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0022402	cell cycle process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030447	filamentous growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0030587	sorocarp development	IEP	Predict GO terms from Neighborhoods
BP	GO:0030641	regulation of cellular pH	IEP	Predict GO terms from Neighborhoods
BP	GO:0031537	regulation of anthocyanin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031540	regulation of anthocyanin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031589	cell-substrate adhesion	IEP	Predict GO terms from Neighborhoods
CC	GO:0032009	early phagosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0032535	regulation of cellular component size	IEP	Predict GO terms from Neighborhoods
BP	GO:0033299	secretion of lysosomal enzymes	IEP	Predict GO terms from Neighborhoods
BP	GO:0034214	protein hexamerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0035592	establishment of protein localization to extracellular region	IEP	Predict GO terms from Neighborhoods
BP	GO:0035601	protein deacylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0035751	regulation of lysosomal lumen pH	IEP	Predict GO terms from Neighborhoods
BP	GO:0036267	invasive filamentous growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0040009	regulation of growth rate	IEP	Predict GO terms from Neighborhoods
BP	GO:0040034	regulation of development, heterochronic	IEP	Predict GO terms from Neighborhoods
BP	GO:0042023	DNA endoreduplication	IEP	Predict GO terms from Neighborhoods
BP	GO:0042752	regulation of circadian rhythm	IEP	Predict GO terms from Neighborhoods
BP	GO:0042753	positive regulation of circadian rhythm	IEP	Predict GO terms from Neighborhoods
BP	GO:0043433	negative regulation of DNA-binding transcription factor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0044182	filamentous growth of a population of unicellular organisms	IEP	Predict GO terms from Neighborhoods
BP	GO:0044786	cell cycle DNA replication	IEP	Predict GO terms from Neighborhoods
BP	GO:0044806	G-quadruplex DNA unwinding	IEP	Predict GO terms from Neighborhoods
BP	GO:0045005	DNA-templated DNA replication maintenance of fidelity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048367	shoot system development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048438	floral whorl development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048467	gynoecium development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048506	regulation of timing of meristematic phase transition	IEP	Predict GO terms from Neighborhoods
BP	GO:0048509	regulation of meristem development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048510	regulation of timing of transition from vegetative to reproductive phase	IEP	Predict GO terms from Neighborhoods
BP	GO:0048731	system development	IEP	Predict GO terms from Neighborhoods
BP	GO:0051090	regulation of DNA-binding transcription factor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051301	cell division	IEP	Predict GO terms from Neighborhoods
BP	GO:0051452	intracellular pH reduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0051453	regulation of intracellular pH	IEP	Predict GO terms from Neighborhoods
BP	GO:0051703	biological process involved in intraspecies interaction between organisms	IEP	Predict GO terms from Neighborhoods
MF	GO:0051880	G-quadruplex DNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0055070	copper ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0061462	protein localization to lysosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0062039	biofilm matrix	IEP	Predict GO terms from Neighborhoods
CC	GO:0062040	fungal biofilm matrix	IEP	Predict GO terms from Neighborhoods
BP	GO:0070070	proton-transporting V-type ATPase complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0070071	proton-transporting two-sector ATPase complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0070072	vacuolar proton-transporting V-type ATPase complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0070783	growth of unicellular organism as a thread of attached cells	IEP	Predict GO terms from Neighborhoods
BP	GO:0070861	regulation of protein exit from endoplasmic reticulum	IEP	Predict GO terms from Neighborhoods
BP	GO:0070863	positive regulation of protein exit from endoplasmic reticulum	IEP	Predict GO terms from Neighborhoods
BP	GO:0071692	protein localization to extracellular region	IEP	Predict GO terms from Neighborhoods
BP	GO:0071840	cellular component organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0080086	stamen filament development	IEP	Predict GO terms from Neighborhoods
BP	GO:0090066	regulation of anatomical structure size	IEP	Predict GO terms from Neighborhoods
BP	GO:0090316	positive regulation of intracellular protein transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0090399	replicative senescence	IEP	Predict GO terms from Neighborhoods
BP	GO:0090567	reproductive shoot system development	IEP	Predict GO terms from Neighborhoods
BP	GO:0098732	macromolecule deacylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0099120	socially cooperative development	IEP	Predict GO terms from Neighborhoods
MF	GO:0106099	2-keto-3-deoxy-L-rhamnonate aldolase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1900055	regulation of leaf senescence	IEP	Predict GO terms from Neighborhoods
BP	GO:1900056	negative regulation of leaf senescence	IEP	Predict GO terms from Neighborhoods
BP	GO:1900140	regulation of seedling development	IEP	Predict GO terms from Neighborhoods
BP	GO:2000008	regulation of protein localization to cell surface	IEP	Predict GO terms from Neighborhoods
BP	GO:2000010	positive regulation of protein localization to cell surface	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR029485	CAT_C	464	514
IPR002293	AA/rel_permease1	157	417

External Links

No external refs found!

SOLTUB.AGRIA.G00000041952

Expression Profile

Co-expression Networks

Functional Annotation