SOLTUB.AGRIA.G00000042446


Description : Translation initiation factor eIF-2B subunit delta


Gene families : OG_02_0017578 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000042446
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_268


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000103 sulfate assimilation IEP Predict GO terms from Neighborhoods
MF GO:0000175 3'-5'-exoribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0001541 ovarian follicle development IEP Predict GO terms from Neighborhoods
BP GO:0001680 tRNA 3'-terminal CCA addition IEP Predict GO terms from Neighborhoods
BP GO:0001887 selenium compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0002429 immune response-activating cell surface receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0002768 immune response-regulating cell surface receptor signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0003743 translation initiation factor activity IEP Predict GO terms from Neighborhoods
MF GO:0004020 adenylylsulfate kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004527 exonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004532 exoribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004540 ribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004779 sulfate adenylyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Predict GO terms from Neighborhoods
MF GO:0004810 tRNA adenylyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0005048 signal sequence binding IEP Predict GO terms from Neighborhoods
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predict GO terms from Neighborhoods
CC GO:0005643 nuclear pore IEP Predict GO terms from Neighborhoods
CC GO:0005851 eukaryotic translation initiation factor 2B complex IEP Predict GO terms from Neighborhoods
BP GO:0006164 purine nucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006402 mRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006413 translational initiation IEP Predict GO terms from Neighborhoods
BP GO:0006508 proteolysis IEP Predict GO terms from Neighborhoods
BP GO:0006606 protein import into nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006607 NLS-bearing protein import into nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006610 ribosomal protein import into nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006624 vacuolar protein processing IEP Predict GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006886 intracellular protein transport IEP Predict GO terms from Neighborhoods
BP GO:0007052 mitotic spindle organization IEP Predict GO terms from Neighborhoods
BP GO:0007079 mitotic chromosome movement towards spindle pole IEP Predict GO terms from Neighborhoods
BP GO:0007080 mitotic metaphase plate congression IEP Predict GO terms from Neighborhoods
BP GO:0007264 small GTPase mediated signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0007265 Ras protein signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0007272 ensheathment of neurons IEP Predict GO terms from Neighborhoods
BP GO:0007596 blood coagulation IEP Predict GO terms from Neighborhoods
BP GO:0007599 hemostasis IEP Predict GO terms from Neighborhoods
MF GO:0008135 translation factor activity, RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0008139 nuclear localization sequence binding IEP Predict GO terms from Neighborhoods
BP GO:0008366 axon ensheathment IEP Predict GO terms from Neighborhoods
MF GO:0008408 3'-5' exonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009260 ribonucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0009336 sulfate adenylyltransferase complex (ATP) IEP Predict GO terms from Neighborhoods
BP GO:0009970 cellular response to sulfate starvation IEP Predict GO terms from Neighborhoods
CC GO:0010494 cytoplasmic stress granule IEP Predict GO terms from Neighborhoods
BP GO:0014003 oligodendrocyte development IEP Predict GO terms from Neighborhoods
BP GO:0015031 protein transport IEP Predict GO terms from Neighborhoods
BP GO:0016485 protein processing IEP Predict GO terms from Neighborhoods
MF GO:0016779 nucleotidyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predict GO terms from Neighborhoods
MF GO:0016896 exoribonuclease activity, producing 5'-phosphomonoesters IEP Predict GO terms from Neighborhoods
MF GO:0019894 kinesin binding IEP Predict GO terms from Neighborhoods
BP GO:0021766 hippocampus development IEP Predict GO terms from Neighborhoods
BP GO:0021782 glial cell development IEP Predict GO terms from Neighborhoods
BP GO:0030097 hemopoiesis IEP Predict GO terms from Neighborhoods
CC GO:0030141 secretory granule IEP Predict GO terms from Neighborhoods
MF GO:0030695 GTPase regulator activity IEP Predict GO terms from Neighborhoods
BP GO:0030953 astral microtubule organization IEP Predict GO terms from Neighborhoods
MF GO:0031072 heat shock protein binding IEP Predict GO terms from Neighborhoods
BP GO:0031122 cytoplasmic microtubule organization IEP Predict GO terms from Neighborhoods
BP GO:0031123 RNA 3'-end processing IEP Predict GO terms from Neighborhoods
MF GO:0031267 small GTPase binding IEP Predict GO terms from Neighborhoods
BP GO:0031291 Ran protein signal transduction IEP Predict GO terms from Neighborhoods
MF GO:0031369 translation initiation factor binding IEP Predict GO terms from Neighborhoods
CC GO:0032045 guanyl-nucleotide exchange factor complex IEP Predict GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Predict GO terms from Neighborhoods
CC GO:0033263 CORVET complex IEP Predict GO terms from Neighborhoods
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034036 purine ribonucleoside bisphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0034399 nuclear periphery IEP Predict GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0040001 establishment of mitotic spindle localization IEP Predict GO terms from Neighborhoods
BP GO:0042552 myelination IEP Predict GO terms from Neighborhoods
BP GO:0042780 tRNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0043087 regulation of GTPase activity IEP Predict GO terms from Neighborhoods
CC GO:0043186 P granule IEP Predict GO terms from Neighborhoods
BP GO:0043628 small regulatory ncRNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044265 cellular macromolecule catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045184 establishment of protein localization IEP Predict GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Predict GO terms from Neighborhoods
BP GO:0048513 animal organ development IEP Predict GO terms from Neighborhoods
BP GO:0048534 hematopoietic or lymphoid organ development IEP Predict GO terms from Neighborhoods
BP GO:0050000 chromosome localization IEP Predict GO terms from Neighborhoods
BP GO:0050427 3'-phosphoadenosine 5'-phosphosulfate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0050428 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0050817 coagulation IEP Predict GO terms from Neighborhoods
BP GO:0050851 antigen receptor-mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0050852 T cell receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0050878 regulation of body fluid levels IEP Predict GO terms from Neighborhoods
MF GO:0051020 GTPase binding IEP Predict GO terms from Neighborhoods
BP GO:0051099 positive regulation of binding IEP Predict GO terms from Neighborhoods
BP GO:0051170 import into nucleus IEP Predict GO terms from Neighborhoods
BP GO:0051225 spindle assembly IEP Predict GO terms from Neighborhoods
CC GO:0051233 spindle midzone IEP Predict GO terms from Neighborhoods
BP GO:0051293 establishment of spindle localization IEP Predict GO terms from Neighborhoods
BP GO:0051303 establishment of chromosome localization IEP Predict GO terms from Neighborhoods
BP GO:0051305 chromosome movement towards spindle pole IEP Predict GO terms from Neighborhoods
BP GO:0051310 metaphase plate congression IEP Predict GO terms from Neighborhoods
BP GO:0051653 spindle localization IEP Predict GO terms from Neighborhoods
MF GO:0051879 Hsp90 protein binding IEP Predict GO terms from Neighborhoods
MF GO:0052928 CTP:3'-cytidine-tRNA cytidylyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0052929 ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0060348 bone development IEP Predict GO terms from Neighborhoods
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predict GO terms from Neighborhoods
MF GO:0061608 nuclear import signal receptor activity IEP Predict GO terms from Neighborhoods
MF GO:0061676 importin-alpha family protein binding IEP Predict GO terms from Neighborhoods
BP GO:0070206 protein trimerization IEP Predict GO terms from Neighborhoods
MF GO:0070566 adenylyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0070813 hydrogen sulfide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0070814 hydrogen sulfide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0071596 ubiquitin-dependent protein catabolic process via the N-end rule pathway IEP Predict GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0071782 endoplasmic reticulum tubular network IEP Predict GO terms from Neighborhoods
BP GO:0090307 mitotic spindle assembly IEP Predict GO terms from Neighborhoods
CC GO:0098827 endoplasmic reticulum subcompartment IEP Predict GO terms from Neighborhoods
CC GO:0099023 vesicle tethering complex IEP Predict GO terms from Neighborhoods
BP GO:0110008 ncRNA deadenylation IEP Predict GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Predict GO terms from Neighborhoods
MF GO:0140104 molecular carrier activity IEP Predict GO terms from Neighborhoods
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predict GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Predict GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:1902503 adenylyltransferase complex IEP Predict GO terms from Neighborhoods
BP GO:1902850 microtubule cytoskeleton organization involved in mitosis IEP Predict GO terms from Neighborhoods
BP GO:1904424 regulation of GTP binding IEP Predict GO terms from Neighborhoods
BP GO:1905097 regulation of guanyl-nucleotide exchange factor activity IEP Predict GO terms from Neighborhoods
BP GO:1905098 negative regulation of guanyl-nucleotide exchange factor activity IEP Predict GO terms from Neighborhoods
CC GO:1990023 mitotic spindle midzone IEP Predict GO terms from Neighborhoods
MF GO:1990817 RNA adenylyltransferase activity IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000649 IF-2B-related 311 602
IPR037171 NagB/RpiA_transferase-like 267 613
No external refs found!