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  5. SOLTUB.AGRIA.G00000000401

SOLTUB.AGRIA.G00000000401


Description : U-box domain-containing family protein


Gene families : OG_02_0000166 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000000401
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_205


Type GO Term Name Evidence Source
BP GO:0002679 respiratory burst involved in defense response IEA AHRD
MF GO:0004842 ubiquitin-protein transferase activity IEA AHRD
MF GO:0005515 protein binding IEA AHRD
CC GO:0005829 cytosol IEA AHRD
BP GO:0009414 response to water deprivation IEA AHRD
BP GO:0010200 response to chitin IEA AHRD
BP GO:0048585 negative regulation of response to stimulus IEA AHRD
BP GO:0050794 regulation of cellular process IEA AHRD
BP GO:0051716 cellular response to stimulus IEA AHRD
BP GO:0051865 protein autoubiquitination IEA AHRD
BP GO:0098542 defense response to other organism IEA AHRD
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Predict GO terms from Neighborhoods
BP GO:0000302 response to reactive oxygen species IEP Predict GO terms from Neighborhoods
CC GO:0000974 Prp19 complex IEP Predict GO terms from Neighborhoods
MF GO:0000987 cis-regulatory region sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0001786 phosphatidylserine binding IEP Predict GO terms from Neighborhoods
BP GO:0001910 regulation of leukocyte mediated cytotoxicity IEP Predict GO terms from Neighborhoods
BP GO:0001912 positive regulation of leukocyte mediated cytotoxicity IEP Predict GO terms from Neighborhoods
BP GO:0001914 regulation of T cell mediated cytotoxicity IEP Predict GO terms from Neighborhoods
BP GO:0001916 positive regulation of T cell mediated cytotoxicity IEP Predict GO terms from Neighborhoods
CC GO:0001917 photoreceptor inner segment IEP Predict GO terms from Neighborhoods
BP GO:0002706 regulation of lymphocyte mediated immunity IEP Predict GO terms from Neighborhoods
BP GO:0002708 positive regulation of lymphocyte mediated immunity IEP Predict GO terms from Neighborhoods
BP GO:0002709 regulation of T cell mediated immunity IEP Predict GO terms from Neighborhoods
BP GO:0002711 positive regulation of T cell mediated immunity IEP Predict GO terms from Neighborhoods
BP GO:0002819 regulation of adaptive immune response IEP Predict GO terms from Neighborhoods
BP GO:0002821 positive regulation of adaptive immune response IEP Predict GO terms from Neighborhoods
BP GO:0002822 regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains IEP Predict GO terms from Neighborhoods
BP GO:0002824 positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains IEP Predict GO terms from Neighborhoods
MF GO:0003700 DNA-binding transcription factor activity IEP Predict GO terms from Neighborhoods
MF GO:0003951 NAD+ kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0005310 dicarboxylic acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0005882 intermediate filament IEP Predict GO terms from Neighborhoods
BP GO:0006004 fucose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006468 protein phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0006493 protein O-linked glycosylation IEP Predict GO terms from Neighborhoods
BP GO:0006622 protein targeting to lysosome IEP Predict GO terms from Neighborhoods
BP GO:0006741 NADP biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0007263 nitric oxide mediated signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0008272 sulfate transport IEP Predict GO terms from Neighborhoods
MF GO:0008447 L-ascorbate oxidase activity IEP Predict GO terms from Neighborhoods
MF GO:0008889 glycerophosphodiester phosphodiesterase activity IEP Predict GO terms from Neighborhoods
BP GO:0009617 response to bacterium IEP Predict GO terms from Neighborhoods
BP GO:0009682 induced systemic resistance IEP Predict GO terms from Neighborhoods
BP GO:0009738 abscisic acid-activated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009751 response to salicylic acid IEP Predict GO terms from Neighborhoods
BP GO:0009755 hormone-mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009786 regulation of asymmetric cell division IEP Predict GO terms from Neighborhoods
BP GO:0009791 post-embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0009957 epidermal cell fate specification IEP Predict GO terms from Neighborhoods
BP GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid IEP Predict GO terms from Neighborhoods
CC GO:0009986 cell surface IEP Predict GO terms from Neighborhoods
BP GO:0009992 cellular water homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0010045 response to nickel cation IEP Predict GO terms from Neighborhoods
BP GO:0010193 response to ozone IEP Predict GO terms from Neighborhoods
BP GO:0010214 seed coat development IEP Predict GO terms from Neighborhoods
BP GO:0010374 stomatal complex development IEP Predict GO terms from Neighborhoods
BP GO:0010384 cell wall proteoglycan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010395 rhamnogalacturonan I metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010404 cell wall hydroxyproline-rich glycoprotein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010405 arabinogalactan protein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010452 histone H3-K36 methylation IEP Predict GO terms from Neighborhoods
BP GO:0010656 negative regulation of muscle cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0010660 regulation of muscle cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0010662 regulation of striated muscle cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0010664 negative regulation of striated muscle cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0010665 regulation of cardiac muscle cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0010667 negative regulation of cardiac muscle cell apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0014070 response to organic cyclic compound IEP Predict GO terms from Neighborhoods
MF GO:0015116 sulfate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015117 thiosulfate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015131 oxaloacetate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015139 alpha-ketoglutarate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015140 malate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015141 succinate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015556 C4-dicarboxylate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015709 thiosulfate transport IEP Predict GO terms from Neighborhoods
BP GO:0015729 oxaloacetate transport IEP Predict GO terms from Neighborhoods
BP GO:0015740 C4-dicarboxylate transport IEP Predict GO terms from Neighborhoods
BP GO:0015743 malate transport IEP Predict GO terms from Neighborhoods
BP GO:0015744 succinate transport IEP Predict GO terms from Neighborhoods
BP GO:0016191 synaptic vesicle uncoating IEP Predict GO terms from Neighborhoods
BP GO:0016310 phosphorylation IEP Predict GO terms from Neighborhoods
MF GO:0016409 palmitoyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016417 S-acyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0016441 post-transcriptional gene silencing IEP Predict GO terms from Neighborhoods
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0017077 oxidative phosphorylation uncoupler activity IEP Predict GO terms from Neighborhoods
BP GO:0018198 peptidyl-cysteine modification IEP Predict GO terms from Neighborhoods
BP GO:0018230 peptidyl-L-cysteine S-palmitoylation IEP Predict GO terms from Neighborhoods
BP GO:0018231 peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine IEP Predict GO terms from Neighborhoods
BP GO:0018258 protein O-linked glycosylation via hydroxyproline IEP Predict GO terms from Neighborhoods
BP GO:0018345 protein palmitoylation IEP Predict GO terms from Neighborhoods
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019674 NAD metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0019706 protein-cysteine S-palmitoyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0019707 protein-cysteine S-acyltransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0030133 transport vesicle IEP Predict GO terms from Neighborhoods
CC GO:0030140 trans-Golgi network transport vesicle IEP Predict GO terms from Neighborhoods
MF GO:0030246 carbohydrate binding IEP Predict GO terms from Neighborhoods
MF GO:0030247 polysaccharide binding IEP Predict GO terms from Neighborhoods
CC GO:0030863 cortical cytoskeleton IEP Predict GO terms from Neighborhoods
CC GO:0030864 cortical actin cytoskeleton IEP Predict GO terms from Neighborhoods
BP GO:0031047 gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:0031341 regulation of cell killing IEP Predict GO terms from Neighborhoods
BP GO:0031343 positive regulation of cell killing IEP Predict GO terms from Neighborhoods
BP GO:0031542 positive regulation of anthocyanin biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0031685 adenosine receptor binding IEP Predict GO terms from Neighborhoods
MF GO:0031686 A1 adenosine receptor binding IEP Predict GO terms from Neighborhoods
CC GO:0031904 endosome lumen IEP Predict GO terms from Neighborhoods
CC GO:0031906 late endosome lumen IEP Predict GO terms from Neighborhoods
BP GO:0032570 response to progesterone IEP Predict GO terms from Neighborhoods
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0034331 cell junction maintenance IEP Predict GO terms from Neighborhoods
BP GO:0034620 cellular response to unfolded protein IEP Predict GO terms from Neighborhoods
BP GO:0035194 post-transcriptional gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:0035195 miRNA-mediated gene silencing IEP Predict GO terms from Neighborhoods
MF GO:0035250 UDP-galactosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0035435 phosphate ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0042542 response to hydrogen peroxide IEP Predict GO terms from Neighborhoods
MF GO:0042736 NADH kinase activity IEP Predict GO terms from Neighborhoods
CC GO:0043195 terminal bouton IEP Predict GO terms from Neighborhoods
CC GO:0043197 dendritic spine IEP Predict GO terms from Neighborhoods
CC GO:0043198 dendritic shaft IEP Predict GO terms from Neighborhoods
MF GO:0043425 bHLH transcription factor binding IEP Predict GO terms from Neighborhoods
BP GO:0043619 regulation of transcription from RNA polymerase II promoter in response to oxidative stress IEP Predict GO terms from Neighborhoods
BP GO:0043954 cellular component maintenance IEP Predict GO terms from Neighborhoods
CC GO:0044309 neuron spine IEP Predict GO terms from Neighborhoods
BP GO:0044788 modulation by host of viral process IEP Predict GO terms from Neighborhoods
BP GO:0044794 positive regulation by host of viral process IEP Predict GO terms from Neighborhoods
BP GO:0044827 modulation by host of viral genome replication IEP Predict GO terms from Neighborhoods
BP GO:0044829 positive regulation by host of viral genome replication IEP Predict GO terms from Neighborhoods
BP GO:0046777 protein autophosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0048364 root development IEP Predict GO terms from Neighborhoods
BP GO:0048527 lateral root development IEP Predict GO terms from Neighborhoods
BP GO:0048528 post-embryonic root development IEP Predict GO terms from Neighborhoods
BP GO:0048856 anatomical structure development IEP Predict GO terms from Neighborhoods
BP GO:0050687 negative regulation of defense response to virus IEP Predict GO terms from Neighborhoods
BP GO:0051093 negative regulation of developmental process IEP Predict GO terms from Neighborhoods
BP GO:0051260 protein homooligomerization IEP Predict GO terms from Neighborhoods
BP GO:0051261 protein depolymerization IEP Predict GO terms from Neighborhoods
BP GO:0055082 cellular chemical homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0055131 C3HC4-type RING finger domain binding IEP Predict GO terms from Neighborhoods
BP GO:0061083 regulation of protein refolding IEP Predict GO terms from Neighborhoods
BP GO:0061462 protein localization to lysosome IEP Predict GO terms from Neighborhoods
BP GO:0061635 regulation of protein complex stability IEP Predict GO terms from Neighborhoods
BP GO:0061738 late endosomal microautophagy IEP Predict GO terms from Neighborhoods
BP GO:0061740 protein targeting to lysosome involved in chaperone-mediated autophagy IEP Predict GO terms from Neighborhoods
BP GO:0071211 protein targeting to vacuole involved in autophagy IEP Predict GO terms from Neighborhoods
BP GO:0071422 succinate transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0071423 malate transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0072318 clathrin coat disassembly IEP Predict GO terms from Neighborhoods
BP GO:0072319 vesicle uncoating IEP Predict GO terms from Neighborhoods
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0080147 root hair cell development IEP Predict GO terms from Neighborhoods
BP GO:0080157 regulation of plant-type cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0090548 response to nitrate starvation IEP Predict GO terms from Neighborhoods
BP GO:0090559 regulation of membrane permeability IEP Predict GO terms from Neighborhoods
BP GO:0090696 post-embryonic plant organ development IEP Predict GO terms from Neighborhoods
BP GO:0097106 postsynaptic density organization IEP Predict GO terms from Neighborhoods
BP GO:0097212 lysosomal membrane organization IEP Predict GO terms from Neighborhoods
BP GO:0097213 regulation of lysosomal membrane permeability IEP Predict GO terms from Neighborhoods
BP GO:0097214 positive regulation of lysosomal membrane permeability IEP Predict GO terms from Neighborhoods
CC GO:0097470 ribbon synapse IEP Predict GO terms from Neighborhoods
CC GO:0098684 photoreceptor ribbon synapse IEP Predict GO terms from Neighborhoods
CC GO:0098690 glycinergic synapse IEP Predict GO terms from Neighborhoods
BP GO:0098880 maintenance of postsynaptic specialization structure IEP Predict GO terms from Neighborhoods
BP GO:0099084 postsynaptic specialization organization IEP Predict GO terms from Neighborhoods
BP GO:0099175 regulation of postsynapse organization IEP Predict GO terms from Neighborhoods
BP GO:0099402 plant organ development IEP Predict GO terms from Neighborhoods
CC GO:0099522 cytosolic region IEP Predict GO terms from Neighborhoods
CC GO:0099523 presynaptic cytosol IEP Predict GO terms from Neighborhoods
CC GO:0099524 postsynaptic cytosol IEP Predict GO terms from Neighborhoods
BP GO:0099558 maintenance of synapse structure IEP Predict GO terms from Neighborhoods
CC GO:0099634 postsynaptic specialization membrane IEP Predict GO terms from Neighborhoods
MF GO:0140545 ATP-dependent protein disaggregase activity IEP Predict GO terms from Neighborhoods
MF GO:0140776 protein-containing complex destabilizing activity IEP Predict GO terms from Neighborhoods
BP GO:1900055 regulation of leaf senescence IEP Predict GO terms from Neighborhoods
BP GO:1900056 negative regulation of leaf senescence IEP Predict GO terms from Neighborhoods
BP GO:1900457 regulation of brassinosteroid mediated signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:1901567 fatty acid derivative binding IEP Predict GO terms from Neighborhoods
BP GO:1902356 oxaloacetate(2-) transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1902358 sulfate transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1903332 regulation of protein folding IEP Predict GO terms from Neighborhoods
BP GO:1903334 positive regulation of protein folding IEP Predict GO terms from Neighborhoods
BP GO:1903338 regulation of cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:1904592 positive regulation of protein refolding IEP Predict GO terms from Neighborhoods
MF GO:1904593 prostaglandin binding IEP Predict GO terms from Neighborhoods
BP GO:1904764 chaperone-mediated autophagy translocation complex disassembly IEP Predict GO terms from Neighborhoods
BP GO:1905710 positive regulation of membrane permeability IEP Predict GO terms from Neighborhoods
CC GO:1990124 messenger ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
MF GO:1990714 hydroxyproline O-galactosyltransferase activity IEP Predict GO terms from Neighborhoods
CC GO:1990718 axonemal central pair projection IEP Predict GO terms from Neighborhoods
BP GO:1990832 slow axonal transport IEP Predict GO terms from Neighborhoods
MF GO:1990833 clathrin-uncoating ATPase activity IEP Predict GO terms from Neighborhoods
CC GO:1990836 lysosomal matrix IEP Predict GO terms from Neighborhoods
BP GO:2000022 regulation of jasmonic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2000070 regulation of response to water deprivation IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR016024 ARM-type_fold 95 392
IPR003613 Ubox_domain 6 75
No external refs found!