Coexpression cluster: Cluster_205 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0036211 protein modification process 46.77% (29/62) 2.2 0.0 0.0
GO:0043412 macromolecule modification 46.77% (29/62) 1.97 0.0 0.0
GO:0019538 protein metabolic process 48.39% (30/62) 1.85 0.0 0.0
GO:0006468 protein phosphorylation 27.42% (17/62) 2.77 0.0 0.0
GO:0016310 phosphorylation 29.03% (18/62) 2.56 0.0 0.0
GO:0002679 respiratory burst involved in defense response 8.06% (5/62) 6.72 0.0 0.0
GO:0002376 immune system process 27.42% (17/62) 2.57 0.0 0.0
GO:0016773 phosphotransferase activity, alcohol group as acceptor 27.42% (17/62) 2.46 0.0 1e-06
GO:1901564 organonitrogen compound metabolic process 54.84% (34/62) 1.33 0.0 2e-06
GO:0016772 transferase activity, transferring phosphorus-containing groups 29.03% (18/62) 2.28 0.0 2e-06
GO:0016740 transferase activity 45.16% (28/62) 1.58 0.0 2e-06
GO:0004672 protein kinase activity 25.81% (16/62) 2.5 0.0 2e-06
GO:0016301 kinase activity 27.42% (17/62) 2.34 0.0 2e-06
GO:0140096 catalytic activity, acting on a protein 37.1% (23/62) 1.84 0.0 2e-06
GO:0005886 plasma membrane 41.94% (26/62) 1.62 0.0 4e-06
GO:0051707 response to other organism 43.55% (27/62) 1.54 0.0 5e-06
GO:0043207 response to external biotic stimulus 45.16% (28/62) 1.49 0.0 5e-06
GO:0046777 protein autophosphorylation 19.35% (12/62) 2.86 0.0 6e-06
GO:0009607 response to biotic stimulus 45.16% (28/62) 1.47 0.0 6e-06
GO:0009605 response to external stimulus 50.0% (31/62) 1.33 0.0 7e-06
GO:0044419 biological process involved in interspecies interaction between organisms 43.55% (27/62) 1.5 0.0 8e-06
GO:0006952 defense response 40.32% (25/62) 1.58 0.0 9e-06
GO:0048583 regulation of response to stimulus 40.32% (25/62) 1.57 0.0 1e-05
GO:0045730 respiratory burst 8.06% (5/62) 5.32 0.0 1e-05
GO:0010337 regulation of salicylic acid metabolic process 8.06% (5/62) 5.3 0.0 1e-05
GO:0002221 pattern recognition receptor signaling pathway 11.29% (7/62) 3.94 0.0 1.9e-05
GO:0006796 phosphate-containing compound metabolic process 30.65% (19/62) 1.86 0.0 2.2e-05
GO:0006793 phosphorus metabolic process 30.65% (19/62) 1.84 1e-06 2.8e-05
GO:0004674 protein serine/threonine kinase activity 19.35% (12/62) 2.48 1e-06 5.6e-05
GO:0043170 macromolecule metabolic process 50.0% (31/62) 1.16 2e-06 7.4e-05
GO:0098542 defense response to other organism 33.87% (21/62) 1.6 2e-06 7.5e-05
GO:0031347 regulation of defense response 22.58% (14/62) 2.13 3e-06 0.000106
GO:0002764 immune response-regulating signaling pathway 12.9% (8/62) 3.17 3e-06 0.000114
GO:0016020 membrane 56.45% (35/62) 1.0 3e-06 0.000115
GO:0009987 cellular process 80.65% (50/62) 0.63 3e-06 0.000118
GO:0032101 regulation of response to external stimulus 20.97% (13/62) 2.09 8e-06 0.000272
GO:0065007 biological regulation 64.52% (40/62) 0.81 8e-06 0.000277
GO:0006807 nitrogen compound metabolic process 54.84% (34/62) 0.97 8e-06 0.000278
GO:0006950 response to stress 54.84% (34/62) 0.97 8e-06 0.000283
GO:0010119 regulation of stomatal movement 12.9% (8/62) 2.93 1e-05 0.000331
GO:0002831 regulation of response to biotic stimulus 19.35% (12/62) 2.18 1.1e-05 0.000348
GO:0008447 L-ascorbate oxidase activity 3.23% (2/62) 8.3 1.5e-05 0.000455
GO:0050776 regulation of immune response 17.74% (11/62) 2.27 1.5e-05 0.000458
GO:1901700 response to oxygen-containing compound 38.71% (24/62) 1.24 2e-05 0.00057
GO:0002252 immune effector process 8.06% (5/62) 3.94 2e-05 0.000576
GO:0080134 regulation of response to stress 25.81% (16/62) 1.7 2e-05 0.000586
GO:0050789 regulation of biological process 59.68% (37/62) 0.83 2.2e-05 0.000623
GO:0048519 negative regulation of biological process 37.1% (23/62) 1.27 2.3e-05 0.000646
GO:0015517 galactose:proton symporter activity 3.23% (2/62) 7.98 2.5e-05 0.000665
GO:1901001 negative regulation of response to salt stress 6.45% (4/62) 4.42 3.8e-05 0.001015
GO:0002682 regulation of immune system process 17.74% (11/62) 2.05 5.7e-05 0.001487
GO:0031663 lipopolysaccharide-mediated signaling pathway 6.45% (4/62) 4.24 6.1e-05 0.001557
GO:0080142 regulation of salicylic acid biosynthetic process 4.84% (3/62) 5.24 7.1e-05 0.001759
GO:1902458 positive regulation of stomatal opening 4.84% (3/62) 5.13 8.9e-05 0.002175
GO:0050896 response to stimulus 62.9% (39/62) 0.7 0.0001 0.002404
GO:0030246 carbohydrate binding 8.06% (5/62) 3.43 0.000103 0.002421
GO:0008150 biological_process 83.87% (52/62) 0.45 0.000115 0.002659
GO:0010033 response to organic substance 38.71% (24/62) 1.09 0.000118 0.002693
GO:0003824 catalytic activity 56.45% (35/62) 0.77 0.000123 0.002743
GO:0007166 cell surface receptor signaling pathway 9.68% (6/62) 2.95 0.000129 0.002795
GO:0030957 Tat protein binding 4.84% (3/62) 4.95 0.000128 0.002818
GO:0044238 primary metabolic process 54.84% (34/62) 0.78 0.000152 0.003236
GO:0110165 cellular anatomical entity 82.26% (51/62) 0.45 0.000162 0.003349
GO:0098755 maintenance of seed dormancy by absisic acid 3.23% (2/62) 6.72 0.000162 0.003388
GO:0050794 regulation of cellular process 51.61% (32/62) 0.82 0.000171 0.003429
GO:0048585 negative regulation of response to stimulus 19.35% (12/62) 1.77 0.000169 0.003434
GO:0008152 metabolic process 62.9% (39/62) 0.66 0.000189 0.003726
GO:0045087 innate immune response 12.9% (8/62) 2.3 0.00021 0.004078
GO:0052542 defense response by callose deposition 6.45% (4/62) 3.75 0.000232 0.004448
GO:0071704 organic substance metabolic process 59.68% (37/62) 0.69 0.000238 0.004493
GO:0016174 NAD(P)H oxidase H2O2-forming activity 3.23% (2/62) 6.39 0.000256 0.004768
GO:0005575 cellular_component 82.26% (51/62) 0.43 0.000268 0.004905
GO:0015575 mannitol transmembrane transporter activity 3.23% (2/62) 6.3 0.000293 0.005086
GO:0015576 sorbitol transmembrane transporter activity 3.23% (2/62) 6.3 0.000293 0.005086
GO:0015591 D-ribose transmembrane transporter activity 3.23% (2/62) 6.3 0.000293 0.005086
GO:0042221 response to chemical 45.16% (28/62) 0.89 0.000283 0.00512
GO:0010053 root epidermal cell differentiation 6.45% (4/62) 3.63 0.000311 0.005267
GO:0010243 response to organonitrogen compound 16.13% (10/62) 1.9 0.000308 0.005283
GO:0015148 D-xylose transmembrane transporter activity 3.23% (2/62) 6.21 0.000332 0.005403
GO:0016021 integral component of membrane 22.58% (14/62) 1.49 0.000324 0.00542
GO:1900056 negative regulation of leaf senescence 4.84% (3/62) 4.49 0.00033 0.005452
GO:0010565 regulation of cellular ketone metabolic process 9.68% (6/62) 2.67 0.000356 0.005589
GO:0031348 negative regulation of defense response 9.68% (6/62) 2.68 0.000353 0.005606
GO:0010200 response to chitin 11.29% (7/62) 2.4 0.000348 0.005608
GO:0006955 immune response 12.9% (8/62) 2.18 0.000365 0.005668
GO:0031224 intrinsic component of membrane 24.19% (15/62) 1.4 0.000387 0.00594
GO:0050687 negative regulation of defense response to virus 3.23% (2/62) 6.05 0.000416 0.006312
GO:0050832 defense response to fungus 14.52% (9/62) 1.98 0.000424 0.006359
GO:0015757 galactose transmembrane transport 3.23% (2/62) 5.98 0.000462 0.006848
GO:0007165 signal transduction 25.81% (16/62) 1.31 0.000478 0.006861
GO:0033037 polysaccharide localization 6.45% (4/62) 3.47 0.000475 0.006884
GO:0052545 callose localization 6.45% (4/62) 3.47 0.000475 0.006884
GO:0050688 regulation of defense response to virus 4.84% (3/62) 4.3 0.000489 0.006938
GO:0010482 regulation of epidermal cell division 3.23% (2/62) 5.91 0.00051 0.007159
GO:0005365 myo-inositol transmembrane transporter activity 3.23% (2/62) 5.84 0.00056 0.007703
GO:0015791 polyol transmembrane transport 3.23% (2/62) 5.84 0.00056 0.007703
GO:0009738 abscisic acid-activated signaling pathway 8.06% (5/62) 2.87 0.000609 0.008281
GO:0009620 response to fungus 17.74% (11/62) 1.63 0.000708 0.00953
GO:1901698 response to nitrogen compound 16.13% (10/62) 1.72 0.000791 0.010335
GO:0046513 ceramide biosynthetic process 3.23% (2/62) 5.6 0.000785 0.010362
GO:0047484 regulation of response to osmotic stress 8.06% (5/62) 2.79 0.000784 0.010457
GO:0106310 protein serine kinase activity 8.06% (5/62) 2.77 0.000832 0.010761
GO:0015168 glycerol transmembrane transporter activity 3.23% (2/62) 5.49 0.000911 0.011677
GO:0018193 peptidyl-amino acid modification 11.29% (7/62) 2.12 0.001114 0.013867
GO:0000166 nucleotide binding 24.19% (15/62) 1.25 0.001112 0.013985
GO:1901265 nucleoside phosphate binding 24.19% (15/62) 1.25 0.001112 0.013985
GO:0009679 hexose:proton symporter activity 3.23% (2/62) 5.26 0.001266 0.015621
GO:0038023 signaling receptor activity 9.68% (6/62) 2.31 0.001327 0.01607
GO:0015166 polyol transmembrane transporter activity 3.23% (2/62) 5.21 0.001344 0.016128
GO:0090627 plant epidermal cell differentiation 6.45% (4/62) 3.08 0.001321 0.016143
GO:0050665 hydrogen peroxide biosynthetic process 3.23% (2/62) 5.13 0.001506 0.017912
GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor 3.23% (2/62) 5.09 0.001591 0.018581
GO:0015750 pentose transmembrane transport 3.23% (2/62) 5.09 0.001591 0.018581
GO:1900424 regulation of defense response to bacterium 8.06% (5/62) 2.54 0.0017 0.01968
GO:0060089 molecular transducer activity 9.68% (6/62) 2.23 0.001718 0.01972
GO:1902456 regulation of stomatal opening 4.84% (3/62) 3.66 0.001775 0.020196
GO:0010026 trichome differentiation 3.23% (2/62) 4.98 0.001857 0.020602
GO:0007231 osmosensory signaling pathway 3.23% (2/62) 4.98 0.001857 0.020602
GO:1903409 reactive oxygen species biosynthetic process 3.23% (2/62) 4.98 0.001857 0.020602
GO:0015146 pentose transmembrane transporter activity 3.23% (2/62) 4.94 0.001951 0.021456
GO:0048584 positive regulation of response to stimulus 17.74% (11/62) 1.45 0.001984 0.021648
GO:0005887 integral component of plasma membrane 6.45% (4/62) 2.88 0.002178 0.02356
GO:0034968 histone lysine methylation 4.84% (3/62) 3.55 0.002209 0.023707
GO:0006672 ceramide metabolic process 3.23% (2/62) 4.84 0.002243 0.023881
GO:0062012 regulation of small molecule metabolic process 9.68% (6/62) 2.15 0.002324 0.024539
GO:0005354 galactose transmembrane transporter activity 3.23% (2/62) 4.78 0.002449 0.025661
GO:0043195 terminal bouton 3.23% (2/62) 4.75 0.002556 0.026563
GO:0051567 histone H3-K9 methylation 3.23% (2/62) 4.72 0.002664 0.027474
GO:0009506 plasmodesma 19.35% (12/62) 1.31 0.00275 0.027927
GO:0022626 cytosolic ribosome 4.84% (3/62) 3.43 0.002748 0.028121
GO:0018022 peptidyl-lysine methylation 4.84% (3/62) 3.4 0.002929 0.029513
GO:1901000 regulation of response to salt stress 6.45% (4/62) 2.75 0.003001 0.02956
GO:0002833 positive regulation of response to biotic stimulus 9.68% (6/62) 2.07 0.002996 0.029733
GO:0036094 small molecule binding 24.19% (15/62) 1.11 0.002985 0.029852
GO:0005351 carbohydrate:proton symporter activity 3.23% (2/62) 4.6 0.003119 0.030273
GO:0005402 carbohydrate:cation symporter activity 3.23% (2/62) 4.6 0.003119 0.030273
GO:1901141 regulation of lignin biosynthetic process 4.84% (3/62) 3.35 0.003263 0.031435
GO:0031349 positive regulation of defense response 9.68% (6/62) 2.04 0.003391 0.032202
GO:0005911 cell-cell junction 19.35% (12/62) 1.27 0.003383 0.032361
GO:0061647 histone H3-K9 modification 3.23% (2/62) 4.49 0.003608 0.033774
GO:0070161 anchoring junction 19.35% (12/62) 1.26 0.0036 0.033945
GO:0005355 glucose transmembrane transporter activity 3.23% (2/62) 4.47 0.003735 0.034477
GO:0005516 calmodulin binding 6.45% (4/62) 2.66 0.003776 0.034615
GO:0016571 histone methylation 4.84% (3/62) 3.28 0.003725 0.034623
GO:0042542 response to hydrogen peroxide 6.45% (4/62) 2.64 0.003946 0.035923
GO:0006968 cellular defense response 3.23% (2/62) 4.42 0.003996 0.036128
GO:0030148 sphingolipid biosynthetic process 3.23% (2/62) 4.39 0.00413 0.037082
GO:0010231 maintenance of seed dormancy 3.23% (2/62) 4.37 0.004265 0.037786
GO:0097437 maintenance of dormancy 3.23% (2/62) 4.37 0.004265 0.037786
GO:0080141 regulation of jasmonic acid biosynthetic process 3.23% (2/62) 4.35 0.004403 0.038746
GO:0080140 regulation of jasmonic acid metabolic process 3.23% (2/62) 4.32 0.004543 0.039711
GO:0032103 positive regulation of response to external stimulus 9.68% (6/62) 1.94 0.004696 0.040782
GO:0030133 transport vesicle 4.84% (3/62) 3.13 0.004952 0.042723
GO:0031625 ubiquitin protein ligase binding 6.45% (4/62) 2.54 0.005075 0.043504
GO:0004683 calmodulin-dependent protein kinase activity 3.23% (2/62) 4.23 0.005122 0.043619
GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor 3.23% (2/62) 4.19 0.005424 0.045892
GO:0004842 ubiquitin-protein transferase activity 8.06% (5/62) 2.11 0.005969 0.049864
GO:0044389 ubiquitin-like protein ligase binding 6.45% (4/62) 2.47 0.005938 0.049927
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_216 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_252 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_60 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_76 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_98 0.012 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_161 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_169 0.008 Orthogroups with 8 Potato genotypes Compare
Sequences (62) (download table)

InterPro Domains

GO Terms

Family Terms