SOLTUB.AGRIA.G00000042954


Description : Pectin acetylesterase


Gene families : OG_02_0020560 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000042954
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_24


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0002238 response to molecule of fungal origin IEP Predict GO terms from Neighborhoods
BP GO:0003333 amino acid transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:0003674 molecular_function IEP Predict GO terms from Neighborhoods
MF GO:0003824 catalytic activity IEP Predict GO terms from Neighborhoods
MF GO:0004197 cysteine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0006865 amino acid transport IEP Predict GO terms from Neighborhoods
MF GO:0008168 methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008171 O-methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008234 cysteine-type peptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0009314 response to radiation IEP Predict GO terms from Neighborhoods
BP GO:0009416 response to light stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009607 response to biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009611 response to wounding IEP Predict GO terms from Neighborhoods
BP GO:0009617 response to bacterium IEP Predict GO terms from Neighborhoods
BP GO:0009750 response to fructose IEP Predict GO terms from Neighborhoods
BP GO:0009751 response to salicylic acid IEP Predict GO terms from Neighborhoods
BP GO:0009753 response to jasmonic acid IEP Predict GO terms from Neighborhoods
BP GO:0009820 alkaloid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010029 regulation of seed germination IEP Predict GO terms from Neighborhoods
CC GO:0010282 senescence-associated vacuole IEP Predict GO terms from Neighborhoods
BP GO:0010608 post-transcriptional regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010623 programmed cell death involved in cell development IEP Predict GO terms from Neighborhoods
BP GO:0010629 negative regulation of gene expression IEP Predict GO terms from Neighborhoods
MF GO:0015171 amino acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0016441 post-transcriptional gene silencing IEP Predict GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predict GO terms from Neighborhoods
MF GO:0019010 farnesoic acid O-methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0030749 loganate O-methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0031047 gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:0033993 response to lipid IEP Predict GO terms from Neighborhoods
BP GO:0035194 post-transcriptional gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:0035195 miRNA-mediated gene silencing IEP Predict GO terms from Neighborhoods
BP GO:0035834 indole alkaloid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042742 defense response to bacterium IEP Predict GO terms from Neighborhoods
BP GO:0043207 response to external biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP Predict GO terms from Neighborhoods
BP GO:0046688 response to copper ion IEP Predict GO terms from Neighborhoods
BP GO:0048580 regulation of post-embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0048658 anther wall tapetum development IEP Predict GO terms from Neighborhoods
BP GO:0051239 regulation of multicellular organismal process IEP Predict GO terms from Neighborhoods
BP GO:0051707 response to other organism IEP Predict GO terms from Neighborhoods
MF GO:0052793 pectin acetylesterase activity IEP Predict GO terms from Neighborhoods
BP GO:0070542 response to fatty acid IEP Predict GO terms from Neighborhoods
BP GO:0080027 response to herbivore IEP Predict GO terms from Neighborhoods
BP GO:0080187 floral organ senescence IEP Predict GO terms from Neighborhoods
BP GO:0097501 stress response to metal ion IEP Predict GO terms from Neighborhoods
BP GO:1900140 regulation of seedling development IEP Predict GO terms from Neighborhoods
BP GO:1901700 response to oxygen-containing compound IEP Predict GO terms from Neighborhoods
BP GO:1990169 stress response to copper ion IEP Predict GO terms from Neighborhoods
BP GO:2000026 regulation of multicellular organismal development IEP Predict GO terms from Neighborhoods
BP GO:2000280 regulation of root development IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004963 PAE/NOTUM 25 311
IPR004963 PAE/NOTUM 312 438
No external refs found!