SOLTUB.AGRIA.G00000043582


Description : Protein modifier of snc1 11


Gene families : OG_02_0004068 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000043582
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_248


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Predict GO terms from Neighborhoods
MF GO:0000166 nucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0000183 rDNA heterochromatin formation IEP Predict GO terms from Neighborhoods
CC GO:0000781 chromosome, telomeric region IEP Predict GO terms from Neighborhoods
CC GO:0000792 heterochromatin IEP Predict GO terms from Neighborhoods
BP GO:0001510 RNA methylation IEP Predict GO terms from Neighborhoods
BP GO:0001893 maternal placenta development IEP Predict GO terms from Neighborhoods
MF GO:0003697 single-stranded DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003730 mRNA 3'-UTR binding IEP Predict GO terms from Neighborhoods
MF GO:0005525 GTP binding IEP Predict GO terms from Neighborhoods
CC GO:0005654 nucleoplasm IEP Predict GO terms from Neighborhoods
CC GO:0005677 chromatin silencing complex IEP Predict GO terms from Neighborhoods
CC GO:0005743 mitochondrial inner membrane IEP Predict GO terms from Neighborhoods
CC GO:0005844 polysome IEP Predict GO terms from Neighborhoods
CC GO:0005849 mRNA cleavage factor complex IEP Predict GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006378 mRNA polyadenylation IEP Predict GO terms from Neighborhoods
BP GO:0006379 mRNA cleavage IEP Predict GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006405 RNA export from nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006406 mRNA export from nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006417 regulation of translation IEP Predict GO terms from Neighborhoods
BP GO:0006913 nucleocytoplasmic transport IEP Predict GO terms from Neighborhoods
BP GO:0007044 cell-substrate junction assembly IEP Predict GO terms from Neighborhoods
BP GO:0007283 spermatogenesis IEP Predict GO terms from Neighborhoods
BP GO:0007291 sperm individualization IEP Predict GO terms from Neighborhoods
BP GO:0007319 negative regulation of oskar mRNA translation IEP Predict GO terms from Neighborhoods
BP GO:0007349 cellularization IEP Predict GO terms from Neighborhoods
BP GO:0007399 nervous system development IEP Predict GO terms from Neighborhoods
MF GO:0008094 ATP-dependent activity, acting on DNA IEP Predict GO terms from Neighborhoods
MF GO:0008173 RNA methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008187 poly-pyrimidine tract binding IEP Predict GO terms from Neighborhoods
MF GO:0008266 poly(U) RNA binding IEP Predict GO terms from Neighborhoods
BP GO:0008283 cell population proliferation IEP Predict GO terms from Neighborhoods
MF GO:0008649 rRNA methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0009892 negative regulation of metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010468 regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010608 post-transcriptional regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010628 positive regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010629 negative regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010632 regulation of epithelial cell migration IEP Predict GO terms from Neighborhoods
BP GO:0010634 positive regulation of epithelial cell migration IEP Predict GO terms from Neighborhoods
BP GO:0015931 nucleobase-containing compound transport IEP Predict GO terms from Neighborhoods
MF GO:0016433 rRNA (adenine) methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0016441 post-transcriptional gene silencing IEP Predict GO terms from Neighborhoods
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP Predict GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0017148 negative regulation of translation IEP Predict GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0019222 regulation of metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030335 positive regulation of cell migration IEP Predict GO terms from Neighborhoods
MF GO:0030371 translation repressor activity IEP Predict GO terms from Neighborhoods
BP GO:0031053 primary miRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0031123 RNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0031124 mRNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0031167 rRNA methylation IEP Predict GO terms from Neighborhoods
BP GO:0031507 heterochromatin formation IEP Predict GO terms from Neighborhoods
BP GO:0031581 hemidesmosome assembly IEP Predict GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0032561 guanyl ribonucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0033119 negative regulation of RNA splicing IEP Predict GO terms from Neighborhoods
BP GO:0033120 positive regulation of RNA splicing IEP Predict GO terms from Neighborhoods
CC GO:0033553 rDNA heterochromatin IEP Predict GO terms from Neighborhoods
MF GO:0034046 poly(G) binding IEP Predict GO terms from Neighborhoods
BP GO:0034248 regulation of cellular amide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034329 cell junction assembly IEP Predict GO terms from Neighborhoods
BP GO:0034330 cell junction organization IEP Predict GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0035064 methylated histone binding IEP Predict GO terms from Neighborhoods
BP GO:0035196 miRNA processing IEP Predict GO terms from Neighborhoods
MF GO:0035198 miRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0035613 RNA stem-loop binding IEP Predict GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predict GO terms from Neighborhoods
MF GO:0036002 pre-mRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0040017 positive regulation of locomotion IEP Predict GO terms from Neighborhoods
BP GO:0042149 cellular response to glucose starvation IEP Predict GO terms from Neighborhoods
MF GO:0043021 ribonucleoprotein complex binding IEP Predict GO terms from Neighborhoods
MF GO:0043022 ribosome binding IEP Predict GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Predict GO terms from Neighborhoods
CC GO:0043186 P granule IEP Predict GO terms from Neighborhoods
CC GO:0043230 extracellular organelle IEP Predict GO terms from Neighborhoods
BP GO:0043484 regulation of RNA splicing IEP Predict GO terms from Neighborhoods
BP GO:0043631 RNA polyadenylation IEP Predict GO terms from Neighborhoods
BP GO:0044260 cellular macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045727 positive regulation of translation IEP Predict GO terms from Neighborhoods
BP GO:0045814 negative regulation of gene expression, epigenetic IEP Predict GO terms from Neighborhoods
BP GO:0046011 regulation of oskar mRNA translation IEP Predict GO terms from Neighborhoods
BP GO:0046015 regulation of transcription by glucose IEP Predict GO terms from Neighborhoods
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0048025 negative regulation of mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0048026 positive regulation of mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
MF GO:0048027 mRNA 5'-UTR binding IEP Predict GO terms from Neighborhoods
BP GO:0048137 spermatocyte division IEP Predict GO terms from Neighborhoods
BP GO:0048864 stem cell development IEP Predict GO terms from Neighborhoods
BP GO:0050657 nucleic acid transport IEP Predict GO terms from Neighborhoods
BP GO:0050658 RNA transport IEP Predict GO terms from Neighborhoods
BP GO:0050684 regulation of mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0050685 positive regulation of mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0050686 negative regulation of mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0051028 mRNA transport IEP Predict GO terms from Neighborhoods
BP GO:0051168 nuclear export IEP Predict GO terms from Neighborhoods
BP GO:0051169 nuclear transport IEP Predict GO terms from Neighborhoods
BP GO:0051236 establishment of RNA localization IEP Predict GO terms from Neighborhoods
BP GO:0051247 positive regulation of protein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0060135 maternal process involved in female pregnancy IEP Predict GO terms from Neighborhoods
BP GO:0060255 regulation of macromolecule metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0061980 regulatory RNA binding IEP Predict GO terms from Neighborhoods
CC GO:0065010 extracellular membrane-bounded organelle IEP Predict GO terms from Neighborhoods
CC GO:0070062 extracellular exosome IEP Predict GO terms from Neighborhoods
MF GO:0070717 poly-purine tract binding IEP Predict GO terms from Neighborhoods
BP GO:0070828 heterochromatin organization IEP Predict GO terms from Neighborhoods
BP GO:0070918 small regulatory ncRNA processing IEP Predict GO terms from Neighborhoods
CC GO:0071013 catalytic step 2 spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0071216 cellular response to biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0072331 signal transduction by p53 class mediator IEP Predict GO terms from Neighborhoods
BP GO:0072332 intrinsic apoptotic signaling pathway by p53 class mediator IEP Predict GO terms from Neighborhoods
BP GO:0072396 response to cell cycle checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0072402 response to DNA integrity checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0072423 response to DNA damage checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Predict GO terms from Neighborhoods
MF GO:0097157 pre-mRNA intronic binding IEP Predict GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Predict GO terms from Neighborhoods
BP GO:0097190 apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0097193 intrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Predict GO terms from Neighborhoods
BP GO:0098787 mRNA cleavage involved in mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0098789 pre-mRNA cleavage required for polyadenylation IEP Predict GO terms from Neighborhoods
MF GO:0106142 rRNA (adenine-N1-)-methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0140030 modification-dependent protein binding IEP Predict GO terms from Neighborhoods
MF GO:0140034 methylation-dependent protein binding IEP Predict GO terms from Neighborhoods
MF GO:0140102 catalytic activity, acting on a rRNA IEP Predict GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Predict GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Predict GO terms from Neighborhoods
BP GO:0140718 facultative heterochromatin formation IEP Predict GO terms from Neighborhoods
BP GO:0150115 cell-substrate junction organization IEP Predict GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Predict GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Predict GO terms from Neighborhoods
BP GO:1903312 negative regulation of mRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903313 positive regulation of mRNA metabolic process IEP Predict GO terms from Neighborhoods
CC GO:1903561 extracellular vesicle IEP Predict GO terms from Neighborhoods
BP GO:1903684 regulation of border follicle cell migration IEP Predict GO terms from Neighborhoods
BP GO:1903688 positive regulation of border follicle cell migration IEP Predict GO terms from Neighborhoods
MF GO:1990247 N6-methyladenosine-containing RNA binding IEP Predict GO terms from Neighborhoods
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2000147 positive regulation of cell motility IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR040746 THO1_MOS11_C 65 98
No external refs found!