SOLTUB.AGRIA.G00000000521

Description : Dihydroorotate dehydrogenase (quinone), mitochondrial

Gene families : OG_02_0011900 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000000521
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_159

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
BP	GO:0001101	response to acid chemical	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004152	dihydroorotate dehydrogenase activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005654	nucleoplasm	IEA	AHRD
CC	GO:0005743	mitochondrial inner membrane	IEA	AHRD
CC	GO:0005758	mitochondrial intermembrane space	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006206	pyrimidine nucleobase metabolic process	None	Extended
BP	GO:0006207	'de novo' pyrimidine nucleobase biosynthetic process	IEA	AHRD
BP	GO:0006220	pyrimidine nucleotide metabolic process	None	Extended
BP	GO:0006221	pyrimidine nucleotide biosynthetic process	None	Extended
BP	GO:0006222	UMP biosynthetic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007565	female pregnancy	IEA	AHRD
BP	GO:0007589	body fluid secretion	None	Extended
BP	GO:0007595	lactation	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009112	nucleobase metabolic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009123	nucleoside monophosphate metabolic process	None	Extended
BP	GO:0009124	nucleoside monophosphate biosynthetic process	None	Extended
BP	GO:0009129	pyrimidine nucleoside monophosphate metabolic process	None	Extended
BP	GO:0009130	pyrimidine nucleoside monophosphate biosynthetic process	None	Extended
BP	GO:0009156	ribonucleoside monophosphate biosynthetic process	None	Extended
BP	GO:0009161	ribonucleoside monophosphate metabolic process	None	Extended
BP	GO:0009165	nucleotide biosynthetic process	None	Extended
BP	GO:0009173	pyrimidine ribonucleoside monophosphate metabolic process	None	Extended
BP	GO:0009174	pyrimidine ribonucleoside monophosphate biosynthetic process	None	Extended
BP	GO:0009218	pyrimidine ribonucleotide metabolic process	None	Extended
BP	GO:0009220	pyrimidine ribonucleotide biosynthetic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009260	ribonucleotide biosynthetic process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
MF	GO:0010181	FMN binding	IEA	AHRD
BP	GO:0010243	response to organonitrogen compound	None	Extended
BP	GO:0010821	regulation of mitochondrion organization	None	Extended
BP	GO:0010941	regulation of cell death	None	Extended
BP	GO:0010942	positive regulation of cell death	None	Extended
BP	GO:0014070	response to organic cyclic compound	None	Extended
BP	GO:0014074	response to purine-containing compound	None	Extended
CC	GO:0016020	membrane	None	Extended
CC	GO:0016021	integral component of membrane	IEA	AHRD
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	None	Extended
MF	GO:0016635	oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0019856	pyrimidine nucleobase biosynthetic process	None	Extended
CC	GO:0019866	organelle inner membrane	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022603	regulation of anatomical structure morphogenesis	None	Extended
BP	GO:0031000	response to caffeine	IEA	AHRD
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
BP	GO:0031667	response to nutrient levels	None	Extended
CC	GO:0031966	mitochondrial membrane	None	Extended
CC	GO:0031970	organelle envelope lumen	None	Extended
CC	GO:0031974	membrane-enclosed lumen	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
BP	GO:0033043	regulation of organelle organization	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042594	response to starvation	IEA	AHRD
BP	GO:0042981	regulation of apoptotic process	None	Extended
CC	GO:0043025	neuronal cell body	IEA	AHRD
BP	GO:0043065	positive regulation of apoptotic process	IEA	AHRD
BP	GO:0043067	regulation of programmed cell death	None	Extended
BP	GO:0043068	positive regulation of programmed cell death	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043200	response to amino acid	None	Extended
CC	GO:0043233	organelle lumen	None	Extended
BP	GO:0043279	response to alkaloid	None	Extended
BP	GO:0044205	'de novo' UMP biosynthetic process	IEA	AHRD
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
CC	GO:0044297	cell body	None	Extended
BP	GO:0044703	multi-organism reproductive process	None	Extended
BP	GO:0044706	multi-multicellular organism process	None	Extended
BP	GO:0046049	UMP metabolic process	None	Extended
BP	GO:0046112	nucleobase biosynthetic process	None	Extended
BP	GO:0046390	ribose phosphate biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046903	secretion	None	Extended
MF	GO:0048038	quinone binding	None	Extended
MF	GO:0048039	ubiquinone binding	IEA	AHRD
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050878	regulation of body fluid levels	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
CC	GO:0070013	intracellular organelle lumen	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072527	pyrimidine-containing compound metabolic process	None	Extended
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	None	Extended
BP	GO:0090140	regulation of mitochondrial fission	IEA	AHRD
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901293	nucleoside phosphate biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1903576	response to L-arginine	IEA	AHRD

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Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0000154	rRNA modification	IEP	Predict GO terms from Neighborhoods
CC	GO:0000176	nuclear exosome (RNase complex)	IEP	Predict GO terms from Neighborhoods
CC	GO:0000177	cytoplasmic exosome (RNase complex)	IEP	Predict GO terms from Neighborhoods
CC	GO:0000178	exosome (RNase complex)	IEP	Predict GO terms from Neighborhoods
BP	GO:0000291	nuclear-transcribed mRNA catabolic process, exonucleolytic	IEP	Predict GO terms from Neighborhoods
BP	GO:0000470	maturation of LSU-rRNA	IEP	Predict GO terms from Neighborhoods
CC	GO:0000776	kinetochore	IEP	Predict GO terms from Neighborhoods
BP	GO:0000956	nuclear-transcribed mRNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0001510	RNA methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0002181	cytoplasmic translation	IEP	Predict GO terms from Neighborhoods
BP	GO:0002946	tRNA C5-cytosine methylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0003676	nucleic acid binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003723	RNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003727	single-stranded RNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003743	translation initiation factor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004527	exonuclease activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004536	deoxyribonuclease activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004540	ribonuclease activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005730	nucleolus	IEP	Predict GO terms from Neighborhoods
CC	GO:0005813	centrosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0005819	spindle	IEP	Predict GO terms from Neighborhoods
CC	GO:0005840	ribosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0005851	eukaryotic translation initiation factor 2B complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0006304	DNA modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0006364	rRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0006396	RNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0006400	tRNA modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0006401	RNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006402	mRNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006413	translational initiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006417	regulation of translation	IEP	Predict GO terms from Neighborhoods
BP	GO:0007417	central nervous system development	IEP	Predict GO terms from Neighborhoods
BP	GO:0008033	tRNA processing	IEP	Predict GO terms from Neighborhoods
MF	GO:0008135	translation factor activity, RNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0008169	C-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008173	RNA methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008175	tRNA methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008649	rRNA methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0009383	rRNA (cytosine-C5-)-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009887	animal organ morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010468	regulation of gene expression	IEP	Predict GO terms from Neighborhoods
BP	GO:0010608	post-transcriptional regulation of gene expression	IEP	Predict GO terms from Neighborhoods
CC	GO:0015934	large ribosomal subunit	IEP	Predict GO terms from Neighborhoods
BP	GO:0016070	RNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016072	rRNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016073	snRNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016074	sno(s)RNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016075	rRNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016180	snRNA processing	IEP	Predict GO terms from Neighborhoods
MF	GO:0016427	tRNA (cytosine) methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016428	tRNA (cytosine-5-)-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016434	rRNA (cytosine) methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0019001	guanyl nucleotide binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0022008	neurogenesis	IEP	Predict GO terms from Neighborhoods
CC	GO:0022625	cytosolic large ribosomal subunit	IEP	Predict GO terms from Neighborhoods
BP	GO:0030488	tRNA methylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0030695	GTPase regulator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0031123	RNA 3'-end processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0031126	sno(s)RNA 3'-end processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0031167	rRNA methylation	IEP	Predict GO terms from Neighborhoods
CC	GO:0031616	spindle pole centrosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0031981	nuclear lumen	IEP	Predict GO terms from Neighborhoods
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0032991	protein-containing complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0034248	regulation of cellular amide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034250	positive regulation of cellular amide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034427	nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'	IEP	Predict GO terms from Neighborhoods
BP	GO:0034470	ncRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0034472	snRNA 3'-end processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0034475	U4 snRNA 3'-end processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0034660	ncRNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034661	ncRNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0035196	miRNA processing	IEP	Predict GO terms from Neighborhoods
MF	GO:0035198	miRNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0035262	gonad morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0040013	negative regulation of locomotion	IEP	Predict GO terms from Neighborhoods
BP	GO:0040014	regulation of multicellular organism growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0040018	positive regulation of multicellular organism growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0042335	cuticle development	IEP	Predict GO terms from Neighborhoods
CC	GO:0042788	polysomal ribosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0043144	sno(s)RNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0043170	macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0043228	non-membrane-bounded organelle	IEP	Predict GO terms from Neighborhoods
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Predict GO terms from Neighborhoods
BP	GO:0043628	small regulatory ncRNA 3'-end processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0043928	exonucleolytic catabolism of deadenylated mRNA	IEP	Predict GO terms from Neighborhoods
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045006	DNA deamination	IEP	Predict GO terms from Neighborhoods
MF	GO:0045182	translation regulator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0045727	positive regulation of translation	IEP	Predict GO terms from Neighborhoods
BP	GO:0046662	regulation of oviposition	IEP	Predict GO terms from Neighborhoods
BP	GO:0048520	positive regulation of behavior	IEP	Predict GO terms from Neighborhoods
BP	GO:0048521	negative regulation of behavior	IEP	Predict GO terms from Neighborhoods
BP	GO:0048639	positive regulation of developmental growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0050795	regulation of behavior	IEP	Predict GO terms from Neighborhoods
BP	GO:0051235	maintenance of location	IEP	Predict GO terms from Neighborhoods
BP	GO:0051246	regulation of protein metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051607	defense response to virus	IEP	Predict GO terms from Neighborhoods
BP	GO:0051642	centrosome localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051651	maintenance of location in cell	IEP	Predict GO terms from Neighborhoods
BP	GO:0051657	maintenance of organelle location	IEP	Predict GO terms from Neighborhoods
BP	GO:0051661	maintenance of centrosome location	IEP	Predict GO terms from Neighborhoods
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0061842	microtubule organizing center localization	IEP	Predict GO terms from Neighborhoods
MF	GO:0061980	regulatory RNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0070918	small regulatory ncRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0071025	RNA surveillance	IEP	Predict GO terms from Neighborhoods
BP	GO:0071027	nuclear RNA surveillance	IEP	Predict GO terms from Neighborhoods
BP	GO:0071028	nuclear mRNA surveillance	IEP	Predict GO terms from Neighborhoods
BP	GO:0071051	polyadenylation-dependent snoRNA 3'-end processing	IEP	Predict GO terms from Neighborhoods
CC	GO:0072686	mitotic spindle	IEP	Predict GO terms from Neighborhoods
BP	GO:0080154	regulation of fertilization	IEP	Predict GO terms from Neighborhoods
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0090304	nucleic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090325	regulation of locomotion involved in locomotory behavior	IEP	Predict GO terms from Neighborhoods
BP	GO:0090327	negative regulation of locomotion involved in locomotory behavior	IEP	Predict GO terms from Neighborhoods
BP	GO:0090501	RNA phosphodiester bond hydrolysis	IEP	Predict GO terms from Neighborhoods
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Predict GO terms from Neighborhoods
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Predict GO terms from Neighborhoods
MF	GO:0140102	catalytic activity, acting on a rRNA	IEP	Predict GO terms from Neighborhoods
BP	GO:0140546	defense response to symbiont	IEP	Predict GO terms from Neighborhoods
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	Predict GO terms from Neighborhoods
BP	GO:1900034	regulation of cellular response to heat	IEP	Predict GO terms from Neighborhoods
BP	GO:1900035	negative regulation of cellular response to heat	IEP	Predict GO terms from Neighborhoods
BP	GO:1901046	positive regulation of oviposition	IEP	Predict GO terms from Neighborhoods
BP	GO:1904400	response to Thyroid stimulating hormone	IEP	Predict GO terms from Neighborhoods
BP	GO:1904401	cellular response to Thyroid stimulating hormone	IEP	Predict GO terms from Neighborhoods
BP	GO:1904587	response to glycoprotein	IEP	Predict GO terms from Neighborhoods
BP	GO:1904588	cellular response to glycoprotein	IEP	Predict GO terms from Neighborhoods
CC	GO:1905354	exoribonuclease complex	IEP	Predict GO terms from Neighborhoods
BP	GO:1905516	positive regulation of fertilization	IEP	Predict GO terms from Neighborhoods
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR005720	Dihydroorotate_DH	127	443
IPR005719	Dihydroorotate_DH_2	88	460

External Links

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SOLTUB.AGRIA.G00000000521

Expression Profile

Co-expression Networks

Functional Annotation