SOLTUB.AGRIA.G00000000065

Description : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein, putative

Gene families : OG_02_0024050 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000000065
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_38

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	None	Extended
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009820	alkaloid metabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
MF	GO:0030749	loganate O-methyltransferase activity	IEA	AHRD
BP	GO:0035834	indole alkaloid metabolic process	IEA	AHRD
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080027	response to herbivore	IEA	AHRD
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000105	histidine biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0000159	protein phosphatase type 2A complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0000349	generation of catalytic spliceosome for first transesterification step	IEP	Predict GO terms from Neighborhoods
CC	GO:0000974	Prp19 complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0001709	cell fate determination	IEP	Predict GO terms from Neighborhoods
BP	GO:0001824	blastocyst development	IEP	Predict GO terms from Neighborhoods
MF	GO:0004400	histidinol-phosphate transaminase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006283	transcription-coupled nucleotide-excision repair	IEP	Predict GO terms from Neighborhoods
BP	GO:0006325	chromatin organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0006547	histidine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007443	Malpighian tubule morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0007510	cardioblast cell fate determination	IEP	Predict GO terms from Neighborhoods
MF	GO:0008171	O-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0009511	plasmodesmatal endoplasmic reticulum	IEP	Predict GO terms from Neighborhoods
BP	GO:0010029	regulation of seed germination	IEP	Predict GO terms from Neighborhoods
BP	GO:0010569	regulation of double-strand break repair via homologous recombination	IEP	Predict GO terms from Neighborhoods
BP	GO:0010629	negative regulation of gene expression	IEP	Predict GO terms from Neighborhoods
BP	GO:0010930	negative regulation of auxin mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
MF	GO:0015186	L-glutamine transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015800	acidic amino acid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015813	L-glutamate transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0016106	sesquiterpenoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016441	post-transcriptional gene silencing	IEP	Predict GO terms from Neighborhoods
MF	GO:0019010	farnesoic acid O-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0021987	cerebral cortex development	IEP	Predict GO terms from Neighborhoods
BP	GO:0031047	gene silencing by RNA	IEP	Predict GO terms from Neighborhoods
BP	GO:0032973	amino acid export across plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0033383	geranyl diphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0034002	(R)-limonene synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0034639	L-amino acid efflux transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0034768	(E)-beta-ocimene synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0035194	post-transcriptional gene silencing by RNA	IEP	Predict GO terms from Neighborhoods
BP	GO:0035195	miRNA-mediated gene silencing	IEP	Predict GO terms from Neighborhoods
BP	GO:0043692	monoterpene metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043693	monoterpene biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045292	mRNA cis splicing, via spliceosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0045339	farnesyl diphosphate catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048578	positive regulation of long-day photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:0048580	regulation of post-embryonic development	IEP	Predict GO terms from Neighborhoods
MF	GO:0050550	pinene synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0050551	myrcene synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0050552	(4S)-limonene synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051938	L-glutamate import	IEP	Predict GO terms from Neighborhoods
BP	GO:0060562	epithelial tube morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0060913	cardiac cell fate determination	IEP	Predict GO terms from Neighborhoods
BP	GO:0061333	renal tubule morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0070262	peptidyl-serine dephosphorylation	IEP	Predict GO terms from Neighborhoods
CC	GO:0071007	U2-type catalytic step 2 spliceosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0071014	post-mRNA release spliceosomal complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0080015	sabinene synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0080144	amino acid homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0080188	gene silencing by RNA-directed DNA methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0089718	amino acid import across plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0098712	L-glutamate import across plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:1900140	regulation of seedling development	IEP	Predict GO terms from Neighborhoods
BP	GO:1901938	(-)-exo-alpha-bergamotene metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901940	(-)-exo-alpha-bergamotene biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901941	(+)-epi-alpha-bisabolol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901943	(+)-epi-alpha-bisabolol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902182	shoot apical meristem development	IEP	Predict GO terms from Neighborhoods
BP	GO:1902288	regulation of defense response to oomycetes	IEP	Predict GO terms from Neighborhoods
BP	GO:1902289	negative regulation of defense response to oomycetes	IEP	Predict GO terms from Neighborhoods
BP	GO:2000280	regulation of root development	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR029063	SAM-dependent_MTases_sf	8	208
IPR005299	MeTrfase_7	54	90
IPR005299	MeTrfase_7	91	208

External Links

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SOLTUB.AGRIA.G00000000065

Expression Profile

Co-expression Networks

Functional Annotation