Description : E3 ubiquitin-protein ligase RING1
Gene families : OG_02_0018738 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000007339 | |
Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_249 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000122 | negative regulation of transcription by RNA polymerase II | IEA | AHRD |
BP | GO:0000278 | mitotic cell cycle | IEA | AHRD |
CC | GO:0000791 | euchromatin | IEA | AHRD |
BP | GO:0001702 | gastrulation with mouth forming second | IEA | AHRD |
BP | GO:0001709 | cell fate determination | IEA | AHRD |
CC | GO:0001739 | sex chromatin | IEA | AHRD |
MF | GO:0003682 | chromatin binding | IEA | AHRD |
CC | GO:0005635 | nuclear envelope | IEA | AHRD |
CC | GO:0005730 | nucleolus | IEA | AHRD |
CC | GO:0005829 | cytosol | IEA | AHRD |
MF | GO:0008270 | zinc ion binding | IEA | AHRD |
BP | GO:0009948 | anterior/posterior axis specification | IEA | AHRD |
BP | GO:0010076 | maintenance of floral meristem identity | IEA | AHRD |
BP | GO:0010077 | maintenance of inflorescence meristem identity | IEA | AHRD |
BP | GO:0010492 | maintenance of shoot apical meristem identity | IEA | AHRD |
CC | GO:0016604 | nuclear body | IEA | AHRD |
BP | GO:0021510 | spinal cord development | IEA | AHRD |
BP | GO:0022008 | neurogenesis | IEA | AHRD |
BP | GO:0030708 | germarium-derived female germ-line cyst encapsulation | IEA | AHRD |
BP | GO:0030713 | ovarian follicle cell stalk formation | IEA | AHRD |
BP | GO:0032330 | regulation of chondrocyte differentiation | IEA | AHRD |
BP | GO:0032526 | response to retinoic acid | IEA | AHRD |
BP | GO:0033339 | pectoral fin development | IEA | AHRD |
CC | GO:0035102 | PRC1 complex | IEA | AHRD |
BP | GO:0036353 | histone H2A-K119 monoubiquitination | IEA | AHRD |
BP | GO:0043433 | negative regulation of DNA-binding transcription factor activity | IEA | AHRD |
BP | GO:0045498 | sex comb development | IEA | AHRD |
BP | GO:0048701 | embryonic cranial skeleton morphogenesis | IEA | AHRD |
BP | GO:0060042 | retina morphogenesis in camera-type eye | IEA | AHRD |
MF | GO:0061630 | ubiquitin protein ligase activity | IEA | AHRD |
CC | GO:0071339 | MLL1 complex | IEA | AHRD |
MF | GO:0071535 | RING-like zinc finger domain binding | IEA | AHRD |
MF | GO:0097027 | ubiquitin-protein transferase activator activity | IEA | AHRD |
BP | GO:1902254 | negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator | IEA | AHRD |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000118 | histone deacetylase complex | IEP | Predict GO terms from Neighborhoods |
CC | GO:0000776 | kinetochore | IEP | Predict GO terms from Neighborhoods |
CC | GO:0000781 | chromosome, telomeric region | IEP | Predict GO terms from Neighborhoods |
MF | GO:0000976 | transcription cis-regulatory region binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0000993 | RNA polymerase II complex binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0001067 | transcription regulatory region nucleic acid binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0001098 | basal transcription machinery binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0001099 | basal RNA polymerase II transcription machinery binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0001221 | transcription coregulator binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0003677 | DNA binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0003690 | double-stranded DNA binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0003691 | double-stranded telomeric DNA binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0003697 | single-stranded DNA binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0003712 | transcription coregulator activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0003714 | transcription corepressor activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0003727 | single-stranded RNA binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0003933 | GTP cyclohydrolase activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0003935 | GTP cyclohydrolase II activity | IEP | Predict GO terms from Neighborhoods |
CC | GO:0005667 | transcription regulator complex | IEP | Predict GO terms from Neighborhoods |
CC | GO:0005701 | polytene chromosome chromocenter | IEP | Predict GO terms from Neighborhoods |
CC | GO:0005703 | polytene chromosome puff | IEP | Predict GO terms from Neighborhoods |
CC | GO:0005705 | polytene chromosome interband | IEP | Predict GO terms from Neighborhoods |
CC | GO:0005721 | pericentric heterochromatin | IEP | Predict GO terms from Neighborhoods |
CC | GO:0005819 | spindle | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006479 | protein methylation | IEP | Predict GO terms from Neighborhoods |
MF | GO:0008134 | transcription factor binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:0008213 | protein alkylation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0009648 | photoperiodism | IEP | Predict GO terms from Neighborhoods |
BP | GO:0009825 | multidimensional cell growth | IEP | Predict GO terms from Neighborhoods |
BP | GO:0009910 | negative regulation of flower development | IEP | Predict GO terms from Neighborhoods |
BP | GO:0010016 | shoot system morphogenesis | IEP | Predict GO terms from Neighborhoods |
BP | GO:0010048 | vernalization response | IEP | Predict GO terms from Neighborhoods |
CC | GO:0010369 | chromocenter | IEP | Predict GO terms from Neighborhoods |
BP | GO:0010638 | positive regulation of organelle organization | IEP | Predict GO terms from Neighborhoods |
BP | GO:0016571 | histone methylation | IEP | Predict GO terms from Neighborhoods |
CC | GO:0016605 | PML body | IEP | Predict GO terms from Neighborhoods |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Predict GO terms from Neighborhoods |
MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Predict GO terms from Neighborhoods |
BP | GO:0016925 | protein sumoylation | IEP | Predict GO terms from Neighborhoods |
CC | GO:0017053 | transcription repressor complex | IEP | Predict GO terms from Neighborhoods |
BP | GO:0018022 | peptidyl-lysine methylation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0018023 | peptidyl-lysine trimethylation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0018205 | peptidyl-lysine modification | IEP | Predict GO terms from Neighborhoods |
MF | GO:0019238 | cyclohydrolase activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0019789 | SUMO transferase activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0030544 | Hsp70 protein binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0030674 | protein-macromolecule adaptor activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0031056 | regulation of histone modification | IEP | Predict GO terms from Neighborhoods |
BP | GO:0031058 | positive regulation of histone modification | IEP | Predict GO terms from Neighborhoods |
BP | GO:0031060 | regulation of histone methylation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0031062 | positive regulation of histone methylation | IEP | Predict GO terms from Neighborhoods |
MF | GO:0031072 | heat shock protein binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:0031334 | positive regulation of protein-containing complex assembly | IEP | Predict GO terms from Neighborhoods |
BP | GO:0031445 | regulation of heterochromatin formation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0031453 | positive regulation of heterochromatin formation | IEP | Predict GO terms from Neighborhoods |
MF | GO:0032182 | ubiquitin-like protein binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0032183 | SUMO binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:0032259 | methylation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0032784 | regulation of DNA-templated transcription elongation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0032786 | positive regulation of DNA-templated transcription, elongation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0032968 | positive regulation of transcription elongation by RNA polymerase II | IEP | Predict GO terms from Neighborhoods |
BP | GO:0033044 | regulation of chromosome organization | IEP | Predict GO terms from Neighborhoods |
BP | GO:0033697 | obsolete positive regulation of extent of heterochromatin assembly | IEP | Predict GO terms from Neighborhoods |
BP | GO:0034243 | regulation of transcription elongation by RNA polymerase II | IEP | Predict GO terms from Neighborhoods |
BP | GO:0034502 | protein localization to chromosome | IEP | Predict GO terms from Neighborhoods |
BP | GO:0034605 | cellular response to heat | IEP | Predict GO terms from Neighborhoods |
BP | GO:0034770 | histone H4-K20 methylation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0034773 | histone H4-K20 trimethylation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0034968 | histone lysine methylation | IEP | Predict GO terms from Neighborhoods |
MF | GO:0035064 | methylated histone binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:0036003 | positive regulation of transcription from RNA polymerase II promoter in response to stress | IEP | Predict GO terms from Neighborhoods |
MF | GO:0042162 | telomeric DNA binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0042393 | histone binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0042802 | identical protein binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0042826 | histone deacetylase binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0043021 | ribonucleoprotein complex binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0043047 | single-stranded telomeric DNA binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0043175 | RNA polymerase core enzyme binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:0043254 | regulation of protein-containing complex assembly | IEP | Predict GO terms from Neighborhoods |
BP | GO:0043414 | macromolecule methylation | IEP | Predict GO terms from Neighborhoods |
MF | GO:0043565 | sequence-specific DNA binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:0043618 | regulation of transcription from RNA polymerase II promoter in response to stress | IEP | Predict GO terms from Neighborhoods |
BP | GO:0043620 | regulation of DNA-templated transcription in response to stress | IEP | Predict GO terms from Neighborhoods |
BP | GO:0044089 | positive regulation of cellular component biogenesis | IEP | Predict GO terms from Neighborhoods |
BP | GO:0045857 | obsolete negative regulation of molecular function, epigenetic | IEP | Predict GO terms from Neighborhoods |
BP | GO:0048573 | photoperiodism, flowering | IEP | Predict GO terms from Neighborhoods |
BP | GO:0048732 | gland development | IEP | Predict GO terms from Neighborhoods |
BP | GO:0048733 | sebaceous gland development | IEP | Predict GO terms from Neighborhoods |
MF | GO:0051219 | phosphoprotein binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:0051570 | regulation of histone H3-K9 methylation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0051574 | positive regulation of histone H3-K9 methylation | IEP | Predict GO terms from Neighborhoods |
MF | GO:0060090 | molecular adaptor activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0061408 | positive regulation of transcription from RNA polymerase II promoter in response to heat stress | IEP | Predict GO terms from Neighborhoods |
MF | GO:0061665 | SUMO ligase activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0070063 | RNA polymerase binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:0070868 | obsolete heterochromatin organization involved in chromatin silencing | IEP | Predict GO terms from Neighborhoods |
BP | GO:0071168 | protein localization to chromatin | IEP | Predict GO terms from Neighborhoods |
BP | GO:0090308 | regulation of DNA methylation-dependent heterochromatin formation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0090309 | positive regulation of DNA methylation-dependent heterochromatin formation | IEP | Predict GO terms from Neighborhoods |
CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | Predict GO terms from Neighborhoods |
CC | GO:0090734 | site of DNA damage | IEP | Predict GO terms from Neighborhoods |
CC | GO:0098687 | chromosomal region | IEP | Predict GO terms from Neighborhoods |
MF | GO:0098847 | sequence-specific single stranded DNA binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0099122 | RNA polymerase II C-terminal domain binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:0120261 | regulation of heterochromatin organization | IEP | Predict GO terms from Neighborhoods |
BP | GO:0120263 | positive regulation of heterochromatin organization | IEP | Predict GO terms from Neighborhoods |
MF | GO:0140030 | modification-dependent protein binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0140034 | methylation-dependent protein binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0140297 | DNA-binding transcription factor binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:1900109 | regulation of histone H3-K9 dimethylation | IEP | Predict GO terms from Neighborhoods |
BP | GO:1900111 | positive regulation of histone H3-K9 dimethylation | IEP | Predict GO terms from Neighborhoods |
BP | GO:1902275 | regulation of chromatin organization | IEP | Predict GO terms from Neighborhoods |
BP | GO:1905269 | positive regulation of chromatin organization | IEP | Predict GO terms from Neighborhoods |
BP | GO:1905632 | protein localization to euchromatin | IEP | Predict GO terms from Neighborhoods |
BP | GO:1905634 | regulation of protein localization to chromatin | IEP | Predict GO terms from Neighborhoods |
BP | GO:1905644 | regulation of FACT complex assembly | IEP | Predict GO terms from Neighborhoods |
BP | GO:1905646 | positive regulation of FACT complex assembly | IEP | Predict GO terms from Neighborhoods |
MF | GO:1990226 | histone methyltransferase binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:1990837 | sequence-specific double-stranded DNA binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:1990841 | promoter-specific chromatin binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:2000242 | negative regulation of reproductive process | IEP | Predict GO terms from Neighborhoods |
BP | GO:2001252 | positive regulation of chromosome organization | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
No external refs found! |