SOLTUB.AGRIA.G00000007670

Description : Leucine--tRNA ligase

Gene families : OG_02_0008048 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000007670
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_187

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEA	AHRD
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004812	aminoacyl-tRNA ligase activity	None	Extended
MF	GO:0004823	leucine-tRNA ligase activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006418	tRNA aminoacylation for protein translation	None	Extended
BP	GO:0006429	leucyl-tRNA aminoacylation	IEA	AHRD
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009507	chloroplast	IEA	AHRD
CC	GO:0009536	plastid	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0043038	amino acid activation	None	Extended
BP	GO:0043039	tRNA aminoacylation	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0003676	nucleic acid binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003723	RNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0004829	threonine-tRNA ligase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005667	transcription regulator complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0005675	transcription factor TFIIH holo complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0006435	threonyl-tRNA aminoacylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006690	icosanoid metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0008391	arachidonic acid monooxygenase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0009295	nucleoid	IEP	Predict GO terms from Neighborhoods
CC	GO:0009532	plastid stroma	IEP	Predict GO terms from Neighborhoods
CC	GO:0009570	chloroplast stroma	IEP	Predict GO terms from Neighborhoods
CC	GO:0009579	thylakoid	IEP	Predict GO terms from Neighborhoods
MF	GO:0009974	zeinoxanthin epsilon hydroxylase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0010291	carotene beta-ring hydroxylase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010581	regulation of starch biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010962	regulation of glucan biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016108	tetraterpenoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016109	tetraterpenoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016116	carotenoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016117	carotenoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016122	xanthophyll metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016123	xanthophyll biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0016363	nuclear matrix	IEP	Predict GO terms from Neighborhoods
MF	GO:0016712	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen	IEP	Predict GO terms from Neighborhoods
CC	GO:0032806	carboxy-terminal domain protein kinase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0032881	regulation of polysaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0032885	regulation of polysaccharide biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0042170	plastid membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0042646	plastid nucleoid	IEP	Predict GO terms from Neighborhoods
BP	GO:0043255	regulation of carbohydrate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043549	regulation of kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0045859	regulation of protein kinase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	Predict GO terms from Neighborhoods
BP	GO:0071900	regulation of protein serine/threonine kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0072374	carotene epsilon hydroxylase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0090575	RNA polymerase II transcription regulator complex	IEP	Predict GO terms from Neighborhoods
CC	GO:1902554	serine/threonine protein kinase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:1902911	protein kinase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:2000904	regulation of starch metabolic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR013155	M/V/L/I-tRNA-synth_anticd-bd	815	923
IPR025709	Leu_tRNA-synth_edit	304	498
IPR009080	tRNAsynth_Ia_anticodon-bd	774	965
IPR009008	Val/Leu/Ile-tRNA-synth_edit	309	510
IPR015413	Methionyl/Leucyl_tRNA_Synth	123	255
IPR002300	aa-tRNA-synth_Ia	730	759
IPR002302	Leu-tRNA-ligase	87	964

External Links

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SOLTUB.AGRIA.G00000007670

Expression Profile

Co-expression Networks

Functional Annotation