SOLTUB.AGRIA.G00000007761

Description : GTP-binding protein Era-like protein

Gene families : OG_02_0018792 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000007761
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_256

Type	GO Term	Name	Evidence	Source
BP	GO:0000028	ribosomal small subunit assembly	IEA	AHRD
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0019843	rRNA binding	IEA	AHRD
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0022618	ribonucleoprotein complex assembly	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043021	ribonucleoprotein complex binding	None	Extended
MF	GO:0043022	ribosome binding	None	Extended
MF	GO:0043024	ribosomal small subunit binding	IEA	AHRD
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
MF	GO:0044877	protein-containing complex binding	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071826	ribonucleoprotein complex subunit organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097177	mitochondrial ribosome binding	IEA	AHRD
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	IEP	Predict GO terms from Neighborhoods
BP	GO:0000278	mitotic cell cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0000381	regulation of alternative mRNA splicing, via spliceosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0000428	DNA-directed RNA polymerase complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0001018	mitochondrial promoter sequence-specific DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0001091	RNA polymerase II general transcription initiation factor binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0001093	TFIIB-class transcription factor binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0001098	basal transcription machinery binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0001099	basal RNA polymerase II transcription machinery binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0001650	fibrillar center	IEP	Predict GO terms from Neighborhoods
BP	GO:0001837	epithelial to mesenchymal transition	IEP	Predict GO terms from Neighborhoods
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004066	asparagine synthase (glutamine-hydrolyzing) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004652	polynucleotide adenylyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005048	signal sequence binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005703	polytene chromosome puff	IEP	Predict GO terms from Neighborhoods
CC	GO:0005732	sno(s)RNA-containing ribonucleoprotein complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0005737	cytoplasm	IEP	Predict GO terms from Neighborhoods
CC	GO:0005742	mitochondrial outer membrane translocase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0006351	DNA-templated transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:0006355	regulation of DNA-templated transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:0006390	mitochondrial transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:0006417	regulation of translation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006528	asparagine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006529	asparagine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006541	glutamine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006606	protein import into nucleus	IEP	Predict GO terms from Neighborhoods
BP	GO:0006839	mitochondrial transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006886	intracellular protein transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0007000	nucleolus organization	IEP	Predict GO terms from Neighborhoods
MF	GO:0008139	nuclear localization sequence binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0008320	protein transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009295	nucleoid	IEP	Predict GO terms from Neighborhoods
BP	GO:0009299	mRNA transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:0010586	miRNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010608	post-transcriptional regulation of gene expression	IEP	Predict GO terms from Neighborhoods
BP	GO:0014029	neural crest formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0014032	neural crest cell development	IEP	Predict GO terms from Neighborhoods
CC	GO:0015030	Cajal body	IEP	Predict GO terms from Neighborhoods
BP	GO:0016070	RNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016074	sno(s)RNA metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016779	nucleotidyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Predict GO terms from Neighborhoods
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	Predict GO terms from Neighborhoods
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0022884	macromolecule transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030150	protein import into mitochondrial matrix	IEP	Predict GO terms from Neighborhoods
MF	GO:0030515	snoRNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0030518	intracellular steroid hormone receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
MF	GO:0030519	snoRNP binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0030520	intracellular estrogen receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
CC	GO:0030532	small nuclear ribonucleoprotein complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0030880	RNA polymerase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0031123	RNA 3'-end processing	IEP	Predict GO terms from Neighborhoods
CC	GO:0031428	box C/D RNP complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0031429	box H/ACA snoRNP complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0032774	RNA biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0032991	protein-containing complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0033365	protein localization to organelle	IEP	Predict GO terms from Neighborhoods
BP	GO:0033979	box H/ACA RNA metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0034245	mitochondrial DNA-directed RNA polymerase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0034248	regulation of cellular amide metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0034512	box C/D RNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0034513	box H/ACA snoRNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0036002	pre-mRNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0042254	ribosome biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0042306	regulation of protein import into nucleus	IEP	Predict GO terms from Neighborhoods
CC	GO:0042645	mitochondrial nucleoid	IEP	Predict GO terms from Neighborhoods
BP	GO:0043631	RNA polyadenylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0043633	polyadenylation-dependent RNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044085	cellular component biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044743	protein transmembrane import into intracellular organelle	IEP	Predict GO terms from Neighborhoods
BP	GO:0045445	myoblast differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045667	regulation of osteoblast differentiation	IEP	Predict GO terms from Neighborhoods
MF	GO:0046332	SMAD binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0046822	regulation of nucleocytoplasmic transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0048762	mesenchymal cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048864	stem cell development	IEP	Predict GO terms from Neighborhoods
BP	GO:0050688	regulation of defense response to virus	IEP	Predict GO terms from Neighborhoods
BP	GO:0050779	RNA destabilization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051170	import into nucleus	IEP	Predict GO terms from Neighborhoods
BP	GO:0061157	mRNA destabilization	IEP	Predict GO terms from Neighborhoods
BP	GO:0061614	miRNA transcription	IEP	Predict GO terms from Neighborhoods
MF	GO:0062064	box C/D snoRNP complex binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0062065	box H/ACA snoRNP complex binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0065002	intracellular protein transmembrane transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0070566	adenylyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0070585	protein localization to mitochondrion	IEP	Predict GO terms from Neighborhoods
BP	GO:0070981	L-asparagine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0070982	L-asparagine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0071042	nuclear polyadenylation-dependent mRNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0071047	polyadenylation-dependent mRNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0072331	signal transduction by p53 class mediator	IEP	Predict GO terms from Neighborhoods
BP	GO:0072332	intrinsic apoptotic signaling pathway by p53 class mediator	IEP	Predict GO terms from Neighborhoods
CC	GO:0072588	box H/ACA RNP complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0072594	establishment of protein localization to organelle	IEP	Predict GO terms from Neighborhoods
BP	GO:0072655	establishment of protein localization to mitochondrion	IEP	Predict GO terms from Neighborhoods
BP	GO:0090304	nucleic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0097190	apoptotic signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0097193	intrinsic apoptotic signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0097659	nucleic acid-templated transcription	IEP	Predict GO terms from Neighborhoods
MF	GO:0097747	RNA polymerase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0098798	mitochondrial protein-containing complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0098799	outer mitochondrial membrane protein complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0120114	Sm-like protein family complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0140296	general transcription initiation factor binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0140318	protein transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1900180	regulation of protein localization to nucleus	IEP	Predict GO terms from Neighborhoods
CC	GO:1902494	catalytic complex	IEP	Predict GO terms from Neighborhoods
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:1990120	messenger ribonucleoprotein complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:1990542	mitochondrial transmembrane transport	IEP	Predict GO terms from Neighborhoods
MF	GO:1990841	promoter-specific chromatin binding	IEP	Predict GO terms from Neighborhoods
CC	GO:1990904	ribonucleoprotein complex	IEP	Predict GO terms from Neighborhoods
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2001014	regulation of skeletal muscle cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR006073	GTP-bd	106	230
IPR005225	Small_GTP-bd_dom	105	274
IPR004044	KH_dom_type_2	314	387
IPR027417	P-loop_NTPase	102	287
IPR005662	GTP-bd_Era	105	385
IPR009019	KH_sf_prok-type	291	387

External Links

No external refs found!

SOLTUB.AGRIA.G00000007761

Expression Profile

Co-expression Networks

Functional Annotation