SOLTUB.AGRIA.G00000007936

Description : Bifunctional nuclease 1

Gene families : OG_02_0008091 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000007936
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_6

Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	None	Extended
CC	GO:0000153	cytoplasmic ubiquitin ligase complex	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009620	response to fungus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	AHRD
MF	GO:0016787	hydrolase activity	IEA	AHRD
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0030891	VCB complex	IEA	AHRD
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050832	defense response to fungus	IEA	AHRD
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0090305	nucleic acid phosphodiester bond hydrolysis	IEA	AHRD
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000281	mitotic cytokinesis	IEP	Predict GO terms from Neighborhoods
CC	GO:0000331	contractile vacuole	IEP	Predict GO terms from Neighborhoods
BP	GO:0000910	cytokinesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0001701	in utero embryonic development	IEP	Predict GO terms from Neighborhoods
MF	GO:0002020	protease binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0002084	protein depalmitoylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0005543	phospholipid binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0005546	phosphatidylinositol-4,5-bisphosphate binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005798	Golgi-associated vesicle	IEP	Predict GO terms from Neighborhoods
CC	GO:0005884	actin filament	IEP	Predict GO terms from Neighborhoods
BP	GO:0006605	protein targeting	IEP	Predict GO terms from Neighborhoods
BP	GO:0006623	protein targeting to vacuole	IEP	Predict GO terms from Neighborhoods
BP	GO:0006892	post-Golgi vesicle-mediated transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006895	Golgi to endosome transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0007015	actin filament organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007034	vacuolar transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0007565	female pregnancy	IEP	Predict GO terms from Neighborhoods
BP	GO:0007610	behavior	IEP	Predict GO terms from Neighborhoods
BP	GO:0007611	learning or memory	IEP	Predict GO terms from Neighborhoods
BP	GO:0007612	learning	IEP	Predict GO terms from Neighborhoods
BP	GO:0008104	protein localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0008306	associative learning	IEP	Predict GO terms from Neighborhoods
MF	GO:0008474	palmitoyl-(protein) hydrolase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0008593	regulation of Notch signaling pathway	IEP	Predict GO terms from Neighborhoods
CC	GO:0009504	cell plate	IEP	Predict GO terms from Neighborhoods
CC	GO:0009579	thylakoid	IEP	Predict GO terms from Neighborhoods
BP	GO:0009792	embryo development ending in birth or egg hatching	IEP	Predict GO terms from Neighborhoods
CC	GO:0010008	endosome membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0016197	endosomal transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0016482	cytosolic transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0016525	negative regulation of angiogenesis	IEP	Predict GO terms from Neighborhoods
CC	GO:0016607	nuclear speck	IEP	Predict GO terms from Neighborhoods
MF	GO:0016790	thiolester hydrolase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0019897	extrinsic component of plasma membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0019898	extrinsic component of membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0030054	cell junction	IEP	Predict GO terms from Neighborhoods
BP	GO:0030100	regulation of endocytosis	IEP	Predict GO terms from Neighborhoods
CC	GO:0030119	AP-type membrane coat adaptor complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0030122	AP-2 adaptor complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0030131	clathrin adaptor complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0030276	clathrin binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0030425	dendrite	IEP	Predict GO terms from Neighborhoods
BP	GO:0030435	sporulation resulting in formation of a cellular spore	IEP	Predict GO terms from Neighborhoods
CC	GO:0030479	actin cortical patch	IEP	Predict GO terms from Neighborhoods
MF	GO:0030674	protein-macromolecule adaptor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030947	regulation of vascular endothelial growth factor receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0030948	negative regulation of vascular endothelial growth factor receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
CC	GO:0031225	anchored component of membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031234	extrinsic component of cytoplasmic side of plasma membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031300	intrinsic component of organelle membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031302	intrinsic component of endosome membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0031334	positive regulation of protein-containing complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0031344	regulation of cell projection organization	IEP	Predict GO terms from Neighborhoods
MF	GO:0032266	phosphatidylinositol-3-phosphate binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0032456	endocytic recycling	IEP	Predict GO terms from Neighborhoods
BP	GO:0032509	endosome transport via multivesicular body sorting pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0032511	late endosome to vacuole transport via multivesicular body sorting pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0032879	regulation of localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0033036	macromolecule localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0034498	early endosome to Golgi transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0035091	phosphatidylinositol binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0035303	regulation of dephosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0035304	regulation of protein dephosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0035601	protein deacylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0035615	clathrin adaptor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042147	retrograde transport, endosome to Golgi	IEP	Predict GO terms from Neighborhoods
BP	GO:0042157	lipoprotein metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042159	lipoprotein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042595	behavioral response to starvation	IEP	Predict GO terms from Neighborhoods
CC	GO:0043005	neuron projection	IEP	Predict GO terms from Neighborhoods
BP	GO:0043009	chordate embryonic development	IEP	Predict GO terms from Neighborhoods
BP	GO:0043254	regulation of protein-containing complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0043934	sporulation	IEP	Predict GO terms from Neighborhoods
BP	GO:0044089	positive regulation of cellular component biogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0044325	transmembrane transporter binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0044703	multi-organism reproductive process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044706	multi-multicellular organism process	IEP	Predict GO terms from Neighborhoods
CC	GO:0045202	synapse	IEP	Predict GO terms from Neighborhoods
BP	GO:0045324	late endosome to vacuole transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0045747	positive regulation of Notch signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0045765	regulation of angiogenesis	IEP	Predict GO terms from Neighborhoods
CC	GO:0046658	anchored component of plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0048193	Golgi vesicle transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0048471	perinuclear region of cytoplasm	IEP	Predict GO terms from Neighborhoods
BP	GO:0048523	negative regulation of cellular process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048568	embryonic organ development	IEP	Predict GO terms from Neighborhoods
BP	GO:0050807	regulation of synapse organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0050877	nervous system process	IEP	Predict GO terms from Neighborhoods
BP	GO:0050890	cognition	IEP	Predict GO terms from Neighborhoods
BP	GO:0051128	regulation of cellular component organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051641	cellular localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051668	localization within membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0055038	recycling endosome membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0060090	molecular adaptor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0060627	regulation of vesicle-mediated transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0061640	cytoskeleton-dependent cytokinesis	IEP	Predict GO terms from Neighborhoods
CC	GO:0061645	endocytic patch	IEP	Predict GO terms from Neighborhoods
BP	GO:0061951	establishment of protein localization to plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0070727	cellular macromolecule localization	IEP	Predict GO terms from Neighborhoods
CC	GO:0071683	sensory dendrite	IEP	Predict GO terms from Neighborhoods
BP	GO:0071985	multivesicular body sorting pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0072594	establishment of protein localization to organelle	IEP	Predict GO terms from Neighborhoods
BP	GO:0072657	protein localization to membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0072659	protein localization to plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0072665	protein localization to vacuole	IEP	Predict GO terms from Neighborhoods
BP	GO:0072666	establishment of protein localization to vacuole	IEP	Predict GO terms from Neighborhoods
MF	GO:0080025	phosphatidylinositol-3,5-bisphosphate binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0090148	membrane fission	IEP	Predict GO terms from Neighborhoods
BP	GO:0090150	establishment of protein localization to membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0090287	regulation of cellular response to growth factor stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0090288	negative regulation of cellular response to growth factor stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0097435	supramolecular fiber organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0098588	bounding membrane of organelle	IEP	Predict GO terms from Neighborhoods
MF	GO:0098599	palmitoyl hydrolase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0098685	Schaffer collateral - CA1 synapse	IEP	Predict GO terms from Neighborhoods
BP	GO:0098732	macromolecule deacylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0098734	macromolecule depalmitoylation	IEP	Predict GO terms from Neighborhoods
CC	GO:0098797	plasma membrane protein complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0098876	vesicle-mediated transport to the plasma membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0098888	extrinsic component of presynaptic membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0098890	extrinsic component of postsynaptic membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0098936	intrinsic component of postsynaptic membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0098948	intrinsic component of postsynaptic specialization membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0098949	intrinsic component of postsynaptic endosome membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0098951	intrinsic component of postsynaptic recycling endosome membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0098978	glutamatergic synapse	IEP	Predict GO terms from Neighborhoods
CC	GO:0099025	anchored component of postsynaptic membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0099030	anchored component of postsynaptic specialization membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0099031	anchored component of postsynaptic density membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0099033	anchored component of postsynaptic recycling endosome membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0099034	anchored component of postsynaptic endosome membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0099081	supramolecular polymer	IEP	Predict GO terms from Neighborhoods
CC	GO:0099144	anchored component of synaptic membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0099146	intrinsic component of postsynaptic density membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0099175	regulation of postsynapse organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0099240	intrinsic component of synaptic membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0099243	extrinsic component of synaptic membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0099512	supramolecular fiber	IEP	Predict GO terms from Neighborhoods
CC	GO:0099513	polymeric cytoskeletal fiber	IEP	Predict GO terms from Neighborhoods
BP	GO:0099638	endosome to plasma membrane protein transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0120035	regulation of plasma membrane bounded cell projection organization	IEP	Predict GO terms from Neighborhoods
MF	GO:0140312	cargo adaptor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1901342	regulation of vasculature development	IEP	Predict GO terms from Neighborhoods
BP	GO:1901343	negative regulation of vasculature development	IEP	Predict GO terms from Neighborhoods
MF	GO:1901981	phosphatidylinositol phosphate binding	IEP	Predict GO terms from Neighborhoods
BP	GO:1902473	regulation of protein localization to synapse	IEP	Predict GO terms from Neighborhoods
BP	GO:1902816	regulation of protein localization to microtubule	IEP	Predict GO terms from Neighborhoods
BP	GO:1902817	negative regulation of protein localization to microtubule	IEP	Predict GO terms from Neighborhoods
MF	GO:1902936	phosphatidylinositol bisphosphate binding	IEP	Predict GO terms from Neighborhoods
BP	GO:1902950	regulation of dendritic spine maintenance	IEP	Predict GO terms from Neighborhoods
BP	GO:1903670	regulation of sprouting angiogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:1903671	negative regulation of sprouting angiogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:1903828	negative regulation of protein localization	IEP	Predict GO terms from Neighborhoods
BP	GO:1903829	positive regulation of protein localization	IEP	Predict GO terms from Neighborhoods
BP	GO:1905443	regulation of clathrin coat assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:1905445	positive regulation of clathrin coat assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:1905666	regulation of protein localization to endosome	IEP	Predict GO terms from Neighborhoods
BP	GO:1905668	positive regulation of protein localization to endosome	IEP	Predict GO terms from Neighborhoods
MF	GO:1990175	EH domain binding	IEP	Predict GO terms from Neighborhoods
BP	GO:1990778	protein localization to cell periphery	IEP	Predict GO terms from Neighborhoods
BP	GO:2000181	negative regulation of blood vessel morphogenesis	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR003729	Bi_nuclease_dom	151	253
IPR036104	BFN_sf	133	261

External Links

No external refs found!

SOLTUB.AGRIA.G00000007936

Expression Profile

Co-expression Networks

Functional Annotation