SOLTUB.AGRIA.G00000008688


Description : COBRA-like protein


Gene families : OG_02_0008198 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000008688
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_142


Type GO Term Name Evidence Source
BP GO:0002239 response to oomycetes IEA AHRD
CC GO:0005774 vacuolar membrane IEA AHRD
CC GO:0009505 plant-type cell wall IEA AHRD
BP GO:0009651 response to salt stress IEA AHRD
BP GO:0009653 anatomical structure morphogenesis IEA AHRD
BP GO:0009825 multidimensional cell growth IEA AHRD
BP GO:0009834 plant-type secondary cell wall biogenesis IEA AHRD
CC GO:0009897 external side of plasma membrane IEA AHRD
CC GO:0009930 longitudinal side of cell surface IEA AHRD
BP GO:0010215 cellulose microfibril organization IEA AHRD
CC GO:0016021 integral component of membrane IEA AHRD
CC GO:0016328 lateral plasma membrane IEA AHRD
BP GO:0032501 multicellular organismal process IEA AHRD
CC GO:0046658 anchored component of plasma membrane IEA AHRD
BP GO:0052324 plant-type cell wall cellulose biosynthetic process IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000165 MAPK cascade IEP Predict GO terms from Neighborhoods
CC GO:0000325 plant-type vacuole IEP Predict GO terms from Neighborhoods
CC GO:0000932 P-body IEP Predict GO terms from Neighborhoods
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0001570 vasculogenesis IEP Predict GO terms from Neighborhoods
BP GO:0001775 cell activation IEP Predict GO terms from Neighborhoods
BP GO:0001817 regulation of cytokine production IEP Predict GO terms from Neighborhoods
BP GO:0001818 negative regulation of cytokine production IEP Predict GO terms from Neighborhoods
BP GO:0002376 immune system process IEP Predict GO terms from Neighborhoods
BP GO:0002521 leukocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0002694 regulation of leukocyte activation IEP Predict GO terms from Neighborhoods
BP GO:0002761 regulation of myeloid leukocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0002763 positive regulation of myeloid leukocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0003342 proepicardium development IEP Predict GO terms from Neighborhoods
MF GO:0003730 mRNA 3'-UTR binding IEP Predict GO terms from Neighborhoods
MF GO:0004197 cysteine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predict GO terms from Neighborhoods
MF GO:0004565 beta-galactosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004567 beta-mannosidase activity IEP Predict GO terms from Neighborhoods
CC GO:0005576 extracellular region IEP Predict GO terms from Neighborhoods
CC GO:0005773 vacuole IEP Predict GO terms from Neighborhoods
BP GO:0006401 RNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006402 mRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006915 apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0007155 cell adhesion IEP Predict GO terms from Neighborhoods
BP GO:0007507 heart development IEP Predict GO terms from Neighborhoods
BP GO:0008219 cell death IEP Predict GO terms from Neighborhoods
MF GO:0008234 cysteine-type peptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0009664 plant-type cell wall organization IEP Predict GO terms from Neighborhoods
BP GO:0009743 response to carbohydrate IEP Predict GO terms from Neighborhoods
BP GO:0009749 response to glucose IEP Predict GO terms from Neighborhoods
BP GO:0009750 response to fructose IEP Predict GO terms from Neighborhoods
BP GO:0009827 plant-type cell wall modification IEP Predict GO terms from Neighborhoods
BP GO:0009828 plant-type cell wall loosening IEP Predict GO terms from Neighborhoods
BP GO:0009845 seed germination IEP Predict GO terms from Neighborhoods
BP GO:0009900 dehiscence IEP Predict GO terms from Neighborhoods
BP GO:0010047 fruit dehiscence IEP Predict GO terms from Neighborhoods
BP GO:0010191 mucilage metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010192 mucilage biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0010282 senescence-associated vacuole IEP Predict GO terms from Neighborhoods
BP GO:0010412 mannan metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0010494 cytoplasmic stress granule IEP Predict GO terms from Neighborhoods
BP GO:0010623 programmed cell death involved in cell development IEP Predict GO terms from Neighborhoods
BP GO:0010837 regulation of keratinocyte proliferation IEP Predict GO terms from Neighborhoods
BP GO:0012501 programmed cell death IEP Predict GO terms from Neighborhoods
BP GO:0014065 phosphatidylinositol 3-kinase signaling IEP Predict GO terms from Neighborhoods
BP GO:0014074 response to purine-containing compound IEP Predict GO terms from Neighborhoods
MF GO:0015923 mannosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0015925 galactosidase activity IEP Predict GO terms from Neighborhoods
BP GO:0016441 post-transcriptional gene silencing IEP Predict GO terms from Neighborhoods
MF GO:0016787 hydrolase activity IEP Predict GO terms from Neighborhoods
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predict GO terms from Neighborhoods
MF GO:0016985 mannan endo-1,4-beta-mannosidase activity IEP Predict GO terms from Neighborhoods
BP GO:0017145 stem cell division IEP Predict GO terms from Neighborhoods
BP GO:0017148 negative regulation of translation IEP Predict GO terms from Neighborhoods
BP GO:0021915 neural tube development IEP Predict GO terms from Neighborhoods
BP GO:0022414 reproductive process IEP Predict GO terms from Neighborhoods
CC GO:0030014 CCR4-NOT complex IEP Predict GO terms from Neighborhoods
BP GO:0030097 hemopoiesis IEP Predict GO terms from Neighborhoods
BP GO:0030098 lymphocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0030217 T cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0030308 negative regulation of cell growth IEP Predict GO terms from Neighborhoods
BP GO:0031086 nuclear-transcribed mRNA catabolic process, deadenylation-independent decay IEP Predict GO terms from Neighborhoods
BP GO:0031098 stress-activated protein kinase signaling cascade IEP Predict GO terms from Neighborhoods
BP GO:0031440 regulation of mRNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0031960 response to corticosteroid IEP Predict GO terms from Neighborhoods
BP GO:0032496 response to lipopolysaccharide IEP Predict GO terms from Neighborhoods
BP GO:0032663 regulation of interleukin-2 production IEP Predict GO terms from Neighborhoods
BP GO:0032703 negative regulation of interleukin-2 production IEP Predict GO terms from Neighborhoods
BP GO:0033077 T cell differentiation in thymus IEP Predict GO terms from Neighborhoods
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034612 response to tumor necrosis factor IEP Predict GO terms from Neighborhoods
BP GO:0035019 somatic stem cell population maintenance IEP Predict GO terms from Neighborhoods
BP GO:0035194 post-transcriptional gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:0035195 miRNA-mediated gene silencing IEP Predict GO terms from Neighborhoods
BP GO:0035264 multicellular organism growth IEP Predict GO terms from Neighborhoods
BP GO:0035278 miRNA-mediated gene silencing by inhibition of translation IEP Predict GO terms from Neighborhoods
BP GO:0035295 tube development IEP Predict GO terms from Neighborhoods
CC GO:0035770 ribonucleoprotein granule IEP Predict GO terms from Neighborhoods
MF GO:0035925 mRNA 3'-UTR AU-rich region binding IEP Predict GO terms from Neighborhoods
CC GO:0036464 cytoplasmic ribonucleoprotein granule IEP Predict GO terms from Neighborhoods
BP GO:0038066 p38MAPK cascade IEP Predict GO terms from Neighborhoods
BP GO:0039020 pronephric nephron tubule development IEP Predict GO terms from Neighborhoods
BP GO:0042110 T cell activation IEP Predict GO terms from Neighborhoods
BP GO:0042545 cell wall modification IEP Predict GO terms from Neighborhoods
BP GO:0043434 response to peptide hormone IEP Predict GO terms from Neighborhoods
BP GO:0043487 regulation of RNA stability IEP Predict GO terms from Neighborhoods
BP GO:0043488 regulation of mRNA stability IEP Predict GO terms from Neighborhoods
BP GO:0043491 protein kinase B signaling IEP Predict GO terms from Neighborhoods
BP GO:0044344 cellular response to fibroblast growth factor stimulus IEP Predict GO terms from Neighborhoods
BP GO:0045321 leukocyte activation IEP Predict GO terms from Neighborhoods
BP GO:0045577 regulation of B cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045598 regulation of fat cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045599 negative regulation of fat cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045600 positive regulation of fat cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045619 regulation of lymphocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045637 regulation of myeloid cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045638 negative regulation of myeloid cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045639 positive regulation of myeloid cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045646 regulation of erythrocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045647 negative regulation of erythrocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045655 regulation of monocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045657 positive regulation of monocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045661 regulation of myoblast differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045930 negative regulation of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0046649 lymphocyte activation IEP Predict GO terms from Neighborhoods
BP GO:0046683 response to organophosphorus IEP Predict GO terms from Neighborhoods
BP GO:0046688 response to copper ion IEP Predict GO terms from Neighborhoods
BP GO:0048015 phosphatidylinositol-mediated signaling IEP Predict GO terms from Neighborhoods
BP GO:0048017 inositol lipid-mediated signaling IEP Predict GO terms from Neighborhoods
CC GO:0048046 apoplast IEP Predict GO terms from Neighborhoods
BP GO:0048103 somatic stem cell division IEP Predict GO terms from Neighborhoods
BP GO:0048354 mucilage biosynthetic process involved in seed coat development IEP Predict GO terms from Neighborhoods
BP GO:0048359 mucilage metabolic process involved in seed coat development IEP Predict GO terms from Neighborhoods
BP GO:0048382 mesendoderm development IEP Predict GO terms from Neighborhoods
BP GO:0048534 hematopoietic or lymphoid organ development IEP Predict GO terms from Neighborhoods
BP GO:0048545 response to steroid hormone IEP Predict GO terms from Neighborhoods
BP GO:0048609 multicellular organismal reproductive process IEP Predict GO terms from Neighborhoods
BP GO:0048640 negative regulation of developmental growth IEP Predict GO terms from Neighborhoods
BP GO:0048658 anther wall tapetum development IEP Predict GO terms from Neighborhoods
BP GO:0050678 regulation of epithelial cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:0050684 regulation of mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0050727 regulation of inflammatory response IEP Predict GO terms from Neighborhoods
BP GO:0050728 negative regulation of inflammatory response IEP Predict GO terms from Neighborhoods
BP GO:0050779 RNA destabilization IEP Predict GO terms from Neighborhoods
BP GO:0050864 regulation of B cell activation IEP Predict GO terms from Neighborhoods
BP GO:0050865 regulation of cell activation IEP Predict GO terms from Neighborhoods
BP GO:0051249 regulation of lymphocyte activation IEP Predict GO terms from Neighborhoods
BP GO:0051348 negative regulation of transferase activity IEP Predict GO terms from Neighborhoods
BP GO:0051384 response to glucocorticoid IEP Predict GO terms from Neighborhoods
BP GO:0051403 stress-activated MAPK cascade IEP Predict GO terms from Neighborhoods
BP GO:0051511 negative regulation of unidimensional cell growth IEP Predict GO terms from Neighborhoods
BP GO:0051591 response to cAMP IEP Predict GO terms from Neighborhoods
BP GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening IEP Predict GO terms from Neighborhoods
BP GO:0060213 positive regulation of nuclear-transcribed mRNA poly(A) tail shortening IEP Predict GO terms from Neighborhoods
BP GO:0060216 definitive hemopoiesis IEP Predict GO terms from Neighborhoods
BP GO:0060429 epithelium development IEP Predict GO terms from Neighborhoods
BP GO:0060485 mesenchyme development IEP Predict GO terms from Neighborhoods
BP GO:0060710 chorio-allantoic fusion IEP Predict GO terms from Neighborhoods
BP GO:0060712 spongiotrophoblast layer development IEP Predict GO terms from Neighborhoods
BP GO:0061013 regulation of mRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0061014 positive regulation of mRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0061157 mRNA destabilization IEP Predict GO terms from Neighborhoods
BP GO:0061158 3'-UTR-mediated mRNA destabilization IEP Predict GO terms from Neighborhoods
BP GO:0061326 renal tubule development IEP Predict GO terms from Neighborhoods
BP GO:0061687 detoxification of inorganic compound IEP Predict GO terms from Neighborhoods
MF GO:0070063 RNA polymerase binding IEP Predict GO terms from Neighborhoods
BP GO:0070371 ERK1 and ERK2 cascade IEP Predict GO terms from Neighborhoods
BP GO:0070848 response to growth factor IEP Predict GO terms from Neighborhoods
BP GO:0071216 cellular response to biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071219 cellular response to molecule of bacterial origin IEP Predict GO terms from Neighborhoods
BP GO:0071222 cellular response to lipopolysaccharide IEP Predict GO terms from Neighborhoods
BP GO:0071320 cellular response to cAMP IEP Predict GO terms from Neighborhoods
BP GO:0071322 cellular response to carbohydrate stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071356 cellular response to tumor necrosis factor IEP Predict GO terms from Neighborhoods
BP GO:0071363 cellular response to growth factor stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071375 cellular response to peptide hormone stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071383 cellular response to steroid hormone stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071384 cellular response to corticosteroid stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071385 cellular response to glucocorticoid stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071472 cellular response to salt stress IEP Predict GO terms from Neighborhoods
BP GO:0071555 cell wall organization IEP Predict GO terms from Neighborhoods
BP GO:0071559 response to transforming growth factor beta IEP Predict GO terms from Neighborhoods
BP GO:0071560 cellular response to transforming growth factor beta stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071585 detoxification of cadmium ion IEP Predict GO terms from Neighborhoods
BP GO:0071774 response to fibroblast growth factor IEP Predict GO terms from Neighborhoods
MF GO:0071889 14-3-3 protein binding IEP Predict GO terms from Neighborhoods
CC GO:0071944 cell periphery IEP Predict GO terms from Neighborhoods
BP GO:0072009 nephron epithelium development IEP Predict GO terms from Neighborhoods
BP GO:0072073 kidney epithelium development IEP Predict GO terms from Neighborhoods
BP GO:0072080 nephron tubule development IEP Predict GO terms from Neighborhoods
BP GO:0072091 regulation of stem cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:0080187 floral organ senescence IEP Predict GO terms from Neighborhoods
BP GO:0090333 regulation of stomatal closure IEP Predict GO terms from Neighborhoods
BP GO:0097011 cellular response to granulocyte macrophage colony-stimulating factor stimulus IEP Predict GO terms from Neighborhoods
BP GO:0097012 response to granulocyte macrophage colony-stimulating factor IEP Predict GO terms from Neighborhoods
BP GO:0097403 cellular response to raffinose IEP Predict GO terms from Neighborhoods
BP GO:0097501 stress response to metal ion IEP Predict GO terms from Neighborhoods
MF GO:0097655 serpin family protein binding IEP Predict GO terms from Neighborhoods
BP GO:0098609 cell-cell adhesion IEP Predict GO terms from Neighborhoods
BP GO:0098754 detoxification IEP Predict GO terms from Neighborhoods
CC GO:0099080 supramolecular complex IEP Predict GO terms from Neighborhoods
BP GO:1900151 regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay IEP Predict GO terms from Neighborhoods
BP GO:1900153 positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay IEP Predict GO terms from Neighborhoods
BP GO:1901347 negative regulation of secondary cell wall biogenesis IEP Predict GO terms from Neighborhoods
BP GO:1901545 response to raffinose IEP Predict GO terms from Neighborhoods
BP GO:1901653 cellular response to peptide IEP Predict GO terms from Neighborhoods
BP GO:1901988 negative regulation of cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1901991 negative regulation of mitotic cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1902105 regulation of leukocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:1902107 positive regulation of leukocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:1903131 mononuclear cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:1903313 positive regulation of mRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903338 regulation of cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:1903339 negative regulation of cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:1903706 regulation of hemopoiesis IEP Predict GO terms from Neighborhoods
BP GO:1903708 positive regulation of hemopoiesis IEP Predict GO terms from Neighborhoods
BP GO:1904245 regulation of polynucleotide adenylyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:1904246 negative regulation of polynucleotide adenylyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:1990059 fruit valve development IEP Predict GO terms from Neighborhoods
BP GO:1990169 stress response to copper ion IEP Predict GO terms from Neighborhoods
BP GO:2000652 regulation of secondary cell wall biogenesis IEP Predict GO terms from Neighborhoods
BP GO:2000736 regulation of stem cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:2000737 negative regulation of stem cell differentiation IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006918 COBRA_pln 45 208
No external refs found!