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  5. SOLTUB.AGRIA.G00000009339

SOLTUB.AGRIA.G00000009339


Description : DNA-directed RNA polymerases II and V subunit 8A


Gene families : OG_02_0013450 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000009339
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_81


Type GO Term Name Evidence Source
CC GO:0000418 RNA polymerase IV complex IEA AHRD
CC GO:0000419 RNA polymerase V complex IEA AHRD
MF GO:0001054 RNA polymerase I activity IEA AHRD
MF GO:0001055 RNA polymerase II activity IEA AHRD
MF GO:0001056 RNA polymerase III activity IEA AHRD
MF GO:0003697 single-stranded DNA binding IEA AHRD
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEA AHRD
MF GO:0005515 protein binding IEA AHRD
CC GO:0005665 RNA polymerase II, core complex IEA AHRD
CC GO:0005666 RNA polymerase III complex IEA AHRD
CC GO:0005736 RNA polymerase I complex IEA AHRD
CC GO:0005829 cytosol IEA AHRD
BP GO:0006360 transcription by RNA polymerase I IEA AHRD
BP GO:0006366 transcription by RNA polymerase II IEA AHRD
CC GO:0032993 protein-DNA complex IEA AHRD
BP GO:0042797 tRNA transcription by RNA polymerase III IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000266 mitochondrial fission IEP Predict GO terms from Neighborhoods
BP GO:0000303 response to superoxide IEP Predict GO terms from Neighborhoods
BP GO:0000305 response to oxygen radical IEP Predict GO terms from Neighborhoods
BP GO:0000338 protein deneddylation IEP Predict GO terms from Neighborhoods
BP GO:0000387 spliceosomal snRNP assembly IEP Predict GO terms from Neighborhoods
BP GO:0000395 mRNA 5'-splice site recognition IEP Predict GO terms from Neighborhoods
CC GO:0000502 proteasome complex IEP Predict GO terms from Neighborhoods
MF GO:0001540 amyloid-beta binding IEP Predict GO terms from Neighborhoods
BP GO:0001541 ovarian follicle development IEP Predict GO terms from Neighborhoods
BP GO:0001751 compound eye photoreceptor cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0001754 eye photoreceptor cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0001825 blastocyst formation IEP Predict GO terms from Neighborhoods
BP GO:0001944 vasculature development IEP Predict GO terms from Neighborhoods
MF GO:0003756 protein disulfide isomerase activity IEP Predict GO terms from Neighborhoods
MF GO:0004129 cytochrome-c oxidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004175 endopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004222 metalloendopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004298 threonine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004362 glutathione-disulfide reductase (NADPH) activity IEP Predict GO terms from Neighborhoods
MF GO:0004774 succinate-CoA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0004775 succinate-CoA ligase (ADP-forming) activity IEP Predict GO terms from Neighborhoods
MF GO:0004776 succinate-CoA ligase (GDP-forming) activity IEP Predict GO terms from Neighborhoods
MF GO:0004791 thioredoxin-disulfide reductase activity IEP Predict GO terms from Neighborhoods
MF GO:0005507 copper ion binding IEP Predict GO terms from Neighborhoods
CC GO:0005654 nucleoplasm IEP Predict GO terms from Neighborhoods
CC GO:0005682 U5 snRNP IEP Predict GO terms from Neighborhoods
CC GO:0005683 U7 snRNP IEP Predict GO terms from Neighborhoods
CC GO:0005685 U1 snRNP IEP Predict GO terms from Neighborhoods
CC GO:0005686 U2 snRNP IEP Predict GO terms from Neighborhoods
CC GO:0005687 U4 snRNP IEP Predict GO terms from Neighborhoods
CC GO:0005689 U12-type spliceosomal complex IEP Predict GO terms from Neighborhoods
CC GO:0005746 mitochondrial respirasome IEP Predict GO terms from Neighborhoods
CC GO:0005747 mitochondrial respiratory chain complex I IEP Predict GO terms from Neighborhoods
CC GO:0005751 mitochondrial respiratory chain complex IV IEP Predict GO terms from Neighborhoods
CC GO:0005758 mitochondrial intermembrane space IEP Predict GO terms from Neighborhoods
CC GO:0005759 mitochondrial matrix IEP Predict GO terms from Neighborhoods
CC GO:0005787 signal peptidase complex IEP Predict GO terms from Neighborhoods
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predict GO terms from Neighborhoods
BP GO:0006099 tricarboxylic acid cycle IEP Predict GO terms from Neighborhoods
BP GO:0006104 succinyl-CoA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006105 succinate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006123 mitochondrial electron transport, cytochrome c to oxygen IEP Predict GO terms from Neighborhoods
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Predict GO terms from Neighborhoods
BP GO:0006376 mRNA splice site selection IEP Predict GO terms from Neighborhoods
BP GO:0006457 protein folding IEP Predict GO terms from Neighborhoods
BP GO:0006465 signal peptide processing IEP Predict GO terms from Neighborhoods
BP GO:0006508 proteolysis IEP Predict GO terms from Neighborhoods
BP GO:0006518 peptide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006605 protein targeting IEP Predict GO terms from Neighborhoods
BP GO:0006627 protein processing involved in protein targeting to mitochondrion IEP Predict GO terms from Neighborhoods
BP GO:0006801 superoxide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0007005 mitochondrion organization IEP Predict GO terms from Neighborhoods
BP GO:0007282 cystoblast division IEP Predict GO terms from Neighborhoods
BP GO:0007309 oocyte axis specification IEP Predict GO terms from Neighborhoods
BP GO:0007310 oocyte dorsal/ventral axis specification IEP Predict GO terms from Neighborhoods
BP GO:0007314 oocyte anterior/posterior axis specification IEP Predict GO terms from Neighborhoods
BP GO:0007409 axonogenesis IEP Predict GO terms from Neighborhoods
BP GO:0007632 visual behavior IEP Predict GO terms from Neighborhoods
BP GO:0008015 blood circulation IEP Predict GO terms from Neighborhoods
BP GO:0008104 protein localization IEP Predict GO terms from Neighborhoods
CC GO:0008180 COP9 signalosome IEP Predict GO terms from Neighborhoods
MF GO:0008233 peptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0008237 metallopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0008306 associative learning IEP Predict GO terms from Neighborhoods
BP GO:0008347 glial cell migration IEP Predict GO terms from Neighborhoods
BP GO:0008535 respiratory chain complex IV assembly IEP Predict GO terms from Neighborhoods
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Predict GO terms from Neighborhoods
BP GO:0008542 visual learning IEP Predict GO terms from Neighborhoods
MF GO:0008794 arsenate reductase (glutaredoxin) activity IEP Predict GO terms from Neighborhoods
BP GO:0009853 photorespiration IEP Predict GO terms from Neighborhoods
BP GO:0009948 anterior/posterior axis specification IEP Predict GO terms from Neighborhoods
BP GO:0009950 dorsal/ventral axis specification IEP Predict GO terms from Neighborhoods
BP GO:0010100 negative regulation of photomorphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010257 NADH dehydrogenase complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0010387 COP9 signalosome assembly IEP Predict GO terms from Neighborhoods
BP GO:0010950 positive regulation of endopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0010971 positive regulation of G2/M transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods
MF GO:0015038 glutathione disulfide oxidoreductase activity IEP Predict GO terms from Neighborhoods
BP GO:0016043 cellular component organization IEP Predict GO terms from Neighborhoods
BP GO:0016050 vesicle organization IEP Predict GO terms from Neighborhoods
BP GO:0016182 synaptic vesicle budding from endosome IEP Predict GO terms from Neighborhoods
BP GO:0016192 vesicle-mediated transport IEP Predict GO terms from Neighborhoods
BP GO:0016226 iron-sulfur cluster assembly IEP Predict GO terms from Neighborhoods
CC GO:0016272 prefoldin complex IEP Predict GO terms from Neighborhoods
BP GO:0016485 protein processing IEP Predict GO terms from Neighborhoods
MF GO:0016504 peptidase activator activity IEP Predict GO terms from Neighborhoods
BP GO:0016559 peroxisome fission IEP Predict GO terms from Neighborhoods
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Predict GO terms from Neighborhoods
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Predict GO terms from Neighborhoods
BP GO:0017004 cytochrome complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0019646 aerobic electron transport chain IEP Predict GO terms from Neighborhoods
CC GO:0019774 proteasome core complex, beta-subunit complex IEP Predict GO terms from Neighborhoods
MF GO:0019784 deNEDDylase activity IEP Predict GO terms from Neighborhoods
BP GO:0019882 antigen processing and presentation IEP Predict GO terms from Neighborhoods
BP GO:0019954 asexual reproduction IEP Predict GO terms from Neighborhoods
BP GO:0022607 cellular component assembly IEP Predict GO terms from Neighborhoods
BP GO:0022900 electron transport chain IEP Predict GO terms from Neighborhoods
BP GO:0022904 respiratory electron transport chain IEP Predict GO terms from Neighborhoods
CC GO:0030008 TRAPP complex IEP Predict GO terms from Neighborhoods
CC GO:0030061 mitochondrial crista IEP Predict GO terms from Neighborhoods
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predict GO terms from Neighborhoods
CC GO:0030121 AP-1 adaptor complex IEP Predict GO terms from Neighborhoods
CC GO:0030122 AP-2 adaptor complex IEP Predict GO terms from Neighborhoods
CC GO:0030131 clathrin adaptor complex IEP Predict GO terms from Neighborhoods
BP GO:0030217 T cell differentiation IEP Predict GO terms from Neighborhoods
MF GO:0030611 arsenate reductase activity IEP Predict GO terms from Neighborhoods
MF GO:0030613 oxidoreductase activity, acting on phosphorus or arsenic in donors IEP Predict GO terms from Neighborhoods
MF GO:0030614 oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor IEP Predict GO terms from Neighborhoods
BP GO:0030656 regulation of vitamin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030718 germ-line stem cell population maintenance IEP Predict GO terms from Neighborhoods
BP GO:0030728 ovulation IEP Predict GO terms from Neighborhoods
CC GO:0030964 NADH dehydrogenase complex IEP Predict GO terms from Neighborhoods
BP GO:0031154 culmination involved in sorocarp development IEP Predict GO terms from Neighborhoods
BP GO:0031163 metallo-sulfur cluster assembly IEP Predict GO terms from Neighborhoods
CC GO:0031597 cytosolic proteasome complex IEP Predict GO terms from Neighborhoods
CC GO:0031970 organelle envelope lumen IEP Predict GO terms from Neighborhoods
CC GO:0031974 membrane-enclosed lumen IEP Predict GO terms from Neighborhoods
BP GO:0032435 negative regulation of proteasomal ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032438 melanosome organization IEP Predict GO terms from Neighborhoods
BP GO:0032981 mitochondrial respiratory chain complex I assembly IEP Predict GO terms from Neighborhoods
BP GO:0033077 T cell differentiation in thymus IEP Predict GO terms from Neighborhoods
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP Predict GO terms from Neighborhoods
MF GO:0033218 amide binding IEP Predict GO terms from Neighborhoods
BP GO:0033617 mitochondrial cytochrome c oxidase assembly IEP Predict GO terms from Neighborhoods
CC GO:0034399 nuclear periphery IEP Predict GO terms from Neighborhoods
CC GO:0034515 proteasome storage granule IEP Predict GO terms from Neighborhoods
CC GO:0034709 methylosome IEP Predict GO terms from Neighborhoods
CC GO:0034719 SMN-Sm protein complex IEP Predict GO terms from Neighborhoods
BP GO:0034982 mitochondrial protein processing IEP Predict GO terms from Neighborhoods
BP GO:0035203 regulation of lamellocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0035204 negative regulation of lamellocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0035206 regulation of hemocyte proliferation IEP Predict GO terms from Neighborhoods
BP GO:0035207 negative regulation of hemocyte proliferation IEP Predict GO terms from Neighborhoods
MF GO:0035615 clathrin adaptor activity IEP Predict GO terms from Neighborhoods
BP GO:0036037 CD8-positive, alpha-beta T cell activation IEP Predict GO terms from Neighborhoods
BP GO:0036099 female germ-line stem cell population maintenance IEP Predict GO terms from Neighborhoods
BP GO:0042110 T cell activation IEP Predict GO terms from Neighborhoods
MF GO:0042277 peptide binding IEP Predict GO terms from Neighborhoods
CC GO:0042709 succinate-CoA ligase complex IEP Predict GO terms from Neighborhoods
CC GO:0042720 mitochondrial inner membrane peptidase complex IEP Predict GO terms from Neighborhoods
CC GO:0043186 P granule IEP Predict GO terms from Neighborhoods
CC GO:0043195 terminal bouton IEP Predict GO terms from Neighborhoods
CC GO:0043233 organelle lumen IEP Predict GO terms from Neighborhoods
BP GO:0043248 proteasome assembly IEP Predict GO terms from Neighborhoods
BP GO:0043374 CD8-positive, alpha-beta T cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0043603 cellular amide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043687 post-translational protein modification IEP Predict GO terms from Neighborhoods
BP GO:0043933 protein-containing complex organization IEP Predict GO terms from Neighborhoods
BP GO:0045047 protein targeting to ER IEP Predict GO terms from Neighborhoods
BP GO:0045048 protein insertion into ER membrane IEP Predict GO terms from Neighborhoods
CC GO:0045239 tricarboxylic acid cycle enzyme complex IEP Predict GO terms from Neighborhoods
CC GO:0045271 respiratory chain complex I IEP Predict GO terms from Neighborhoods
CC GO:0045277 respiratory chain complex IV IEP Predict GO terms from Neighborhoods
BP GO:0045444 fat cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045610 regulation of hemocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045611 negative regulation of hemocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045613 regulation of plasmatocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045614 negative regulation of plasmatocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0046328 regulation of JNK cascade IEP Predict GO terms from Neighborhoods
BP GO:0046530 photoreceptor cell differentiation IEP Predict GO terms from Neighborhoods
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predict GO terms from Neighborhoods
BP GO:0046631 alpha-beta T cell activation IEP Predict GO terms from Neighborhoods
BP GO:0046632 alpha-beta T cell differentiation IEP Predict GO terms from Neighborhoods
MF GO:0047134 protein-disulfide reductase (NAD(P)) activity IEP Predict GO terms from Neighborhoods
BP GO:0048138 germ-line cyst encapsulation IEP Predict GO terms from Neighborhoods
BP GO:0048140 male germ-line cyst encapsulation IEP Predict GO terms from Neighborhoods
BP GO:0048142 germarium-derived cystoblast division IEP Predict GO terms from Neighborhoods
BP GO:0048753 pigment granule organization IEP Predict GO terms from Neighborhoods
BP GO:0050885 neuromuscular process controlling balance IEP Predict GO terms from Neighborhoods
BP GO:0050905 neuromuscular process IEP Predict GO terms from Neighborhoods
BP GO:0051131 chaperone-mediated protein complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0051205 protein insertion into membrane IEP Predict GO terms from Neighborhoods
BP GO:0051336 regulation of hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0051604 protein maturation IEP Predict GO terms from Neighborhoods
BP GO:0051641 cellular localization IEP Predict GO terms from Neighborhoods
BP GO:0051649 establishment of localization in cell IEP Predict GO terms from Neighborhoods
BP GO:0051775 response to redox state IEP Predict GO terms from Neighborhoods
BP GO:0052547 regulation of peptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0052548 regulation of endopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0060612 adipose tissue development IEP Predict GO terms from Neighborhoods
MF GO:0061133 endopeptidase activator activity IEP Predict GO terms from Neighborhoods
BP GO:0061300 cerebellum vasculature development IEP Predict GO terms from Neighborhoods
BP GO:0061448 connective tissue development IEP Predict GO terms from Neighborhoods
MF GO:0061578 Lys63-specific deubiquitinase activity IEP Predict GO terms from Neighborhoods
BP GO:0065003 protein-containing complex assembly IEP Predict GO terms from Neighborhoods
MF GO:0070003 threonine-type peptidase activity IEP Predict GO terms from Neighborhoods
CC GO:0070013 intracellular organelle lumen IEP Predict GO terms from Neighborhoods
CC GO:0070069 cytochrome complex IEP Predict GO terms from Neighborhoods
MF GO:0070122 obsolete isopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0070142 synaptic vesicle budding IEP Predict GO terms from Neighborhoods
CC GO:0070469 respirasome IEP Predict GO terms from Neighborhoods
BP GO:0070536 protein K63-linked deubiquitination IEP Predict GO terms from Neighborhoods
MF GO:0070628 proteasome binding IEP Predict GO terms from Neighborhoods
BP GO:0070727 cellular macromolecule localization IEP Predict GO terms from Neighborhoods
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predict GO terms from Neighborhoods
CC GO:0071004 U2-type prespliceosome IEP Predict GO terms from Neighborhoods
CC GO:0071007 U2-type catalytic step 2 spliceosome IEP Predict GO terms from Neighborhoods
CC GO:0071010 prespliceosome IEP Predict GO terms from Neighborhoods
CC GO:0071014 post-mRNA release spliceosomal complex IEP Predict GO terms from Neighborhoods
BP GO:0071450 cellular response to oxygen radical IEP Predict GO terms from Neighborhoods
BP GO:0071451 cellular response to superoxide IEP Predict GO terms from Neighborhoods
BP GO:0071840 cellular component organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0072657 protein localization to membrane IEP Predict GO terms from Neighborhoods
BP GO:0080129 proteasome core complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0090150 establishment of protein localization to membrane IEP Predict GO terms from Neighborhoods
BP GO:0097250 mitochondrial respirasome assembly IEP Predict GO terms from Neighborhoods
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predict GO terms from Neighborhoods
MF GO:0097573 glutathione oxidoreductase activity IEP Predict GO terms from Neighborhoods
CC GO:0098796 membrane protein complex IEP Predict GO terms from Neighborhoods
CC GO:0098798 mitochondrial protein-containing complex IEP Predict GO terms from Neighborhoods
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predict GO terms from Neighborhoods
CC GO:0098803 respiratory chain complex IEP Predict GO terms from Neighborhoods
BP GO:0099638 endosome to plasma membrane protein transport IEP Predict GO terms from Neighborhoods
CC GO:0120115 Lsm2-8 complex IEP Predict GO terms from Neighborhoods
MF GO:0140312 cargo adaptor activity IEP Predict GO terms from Neighborhoods
BP GO:1900101 regulation of endoplasmic reticulum unfolded protein response IEP Predict GO terms from Neighborhoods
BP GO:1901799 negative regulation of proteasomal protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902751 positive regulation of cell cycle G2/M phase transition IEP Predict GO terms from Neighborhoods
BP GO:1902906 proteasome storage granule assembly IEP Predict GO terms from Neighborhoods
BP GO:1903232 melanosome assembly IEP Predict GO terms from Neighborhoods
BP GO:1903894 regulation of IRE1-mediated unfolded protein response IEP Predict GO terms from Neighborhoods
CC GO:1904813 ficolin-1-rich granule lumen IEP Predict GO terms from Neighborhoods
CC GO:1905368 peptidase complex IEP Predict GO terms from Neighborhoods
CC GO:1905369 endopeptidase complex IEP Predict GO terms from Neighborhoods
BP GO:1905906 regulation of amyloid fibril formation IEP Predict GO terms from Neighborhoods
BP GO:1905907 negative regulation of amyloid fibril formation IEP Predict GO terms from Neighborhoods
CC GO:1990111 spermatoproteasome complex IEP Predict GO terms from Neighborhoods
BP GO:1990182 exosomal secretion IEP Predict GO terms from Neighborhoods
BP GO:2000082 regulation of L-ascorbic acid biosynthetic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005570 RNA_pol_Rpb8 7 144
IPR012340 NA-bd_OB-fold 4 144
No external refs found!