SOLTUB.AGRIA.G00000009451

Description : Small nuclear ribonucleoprotein family protein

Gene families : OG_02_0000928 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000009451
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_171

Type	GO Term	Name	Evidence	Source
CC	GO:0000243	commitment complex	IEA	AHRD
BP	GO:0000387	spliceosomal snRNP assembly	IEA	AHRD
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003729	mRNA binding	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005681	spliceosomal complex	None	Extended
CC	GO:0005682	U5 snRNP	IEA	AHRD
CC	GO:0005683	U7 snRNP	IEA	AHRD
CC	GO:0005684	U2-type spliceosomal complex	None	Extended
CC	GO:0005685	U1 snRNP	IEA	AHRD
CC	GO:0005686	U2 snRNP	IEA	AHRD
CC	GO:0005687	U4 snRNP	IEA	AHRD
CC	GO:0005688	U6 snRNP	IEA	AHRD
CC	GO:0005689	U12-type spliceosomal complex	IEA	AHRD
CC	GO:0005697	telomerase holoenzyme complex	IEA	AHRD
CC	GO:0005730	nucleolus	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
BP	GO:0006479	protein methylation	IEA	AHRD
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008213	protein alkylation	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	AHRD
BP	GO:0016043	cellular component organization	None	Extended
CC	GO:0016604	nuclear body	IEA	AHRD
MF	GO:0017069	snRNA binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019899	enzyme binding	IEA	AHRD
MF	GO:0019904	protein domain specific binding	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0022618	ribonucleoprotein complex assembly	None	Extended
CC	GO:0030532	small nuclear ribonucleoprotein complex	None	Extended
BP	GO:0032259	methylation	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0034708	methyltransferase complex	None	Extended
CC	GO:0034709	methylosome	IEA	AHRD
CC	GO:0034715	pICln-Sm protein complex	IEA	AHRD
CC	GO:0034719	SMN-Sm protein complex	IEA	AHRD
CC	GO:0035770	ribonucleoprotein granule	None	Extended
BP	GO:0036211	protein modification process	None	Extended
CC	GO:0036464	cytoplasmic ribonucleoprotein granule	None	Extended
BP	GO:0040007	growth	None	Extended
MF	GO:0042731	PH domain binding	IEA	AHRD
MF	GO:0043021	ribonucleoprotein complex binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043186	P granule	IEA	AHRD
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
MF	GO:0044877	protein-containing complex binding	None	Extended
CC	GO:0046540	U4/U6 x U5 tri-snRNP complex	IEA	AHRD
BP	GO:0048589	developmental growth	IEA	AHRD
BP	GO:0065003	protein-containing complex assembly	None	Extended
MF	GO:0070034	telomerase RNA binding	IEA	AHRD
MF	GO:0070990	snRNP binding	None	Extended
CC	GO:0071004	U2-type prespliceosome	IEA	AHRD
CC	GO:0071005	U2-type precatalytic spliceosome	IEA	AHRD
CC	GO:0071007	U2-type catalytic step 2 spliceosome	IEA	AHRD
CC	GO:0071010	prespliceosome	None	Extended
CC	GO:0071011	precatalytic spliceosome	None	Extended
CC	GO:0071013	catalytic step 2 spliceosome	None	Extended
MF	GO:0071208	histone pre-mRNA DCP binding	IEA	AHRD
MF	GO:0071209	U7 snRNA binding	IEA	AHRD
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071826	ribonucleoprotein complex subunit organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0097525	spliceosomal snRNP complex	None	Extended
CC	GO:0097526	spliceosomal tri-snRNP complex	None	Extended
CC	GO:0099080	supramolecular complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:0120114	Sm-like protein family complex	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended
MF	GO:1990446	U1 snRNP binding	IEA	AHRD
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000030	mannosyltransferase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0000124	SAGA complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0000338	protein deneddylation	IEP	Predict GO terms from Neighborhoods
CC	GO:0000418	RNA polymerase IV complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0000419	RNA polymerase V complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0000506	glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0000785	chromatin	IEP	Predict GO terms from Neighborhoods
MF	GO:0001054	RNA polymerase I activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0001055	RNA polymerase II activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0001056	RNA polymerase III activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0001091	RNA polymerase II general transcription initiation factor binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0001094	TFIID-class transcription factor complex binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0001098	basal transcription machinery binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0001099	basal RNA polymerase II transcription machinery binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0001172	RNA-templated transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:0002244	hematopoietic progenitor cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0002791	regulation of peptide secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0002792	negative regulation of peptide secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0003159	morphogenesis of an endothelium	IEP	Predict GO terms from Neighborhoods
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0003968	RNA-directed 5'-3' RNA polymerase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004222	metalloendopeptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004582	dolichyl-phosphate beta-D-mannosyltransferase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005665	RNA polymerase II, core complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0005666	RNA polymerase III complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0005736	RNA polymerase I complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0005747	mitochondrial respiratory chain complex I	IEP	Predict GO terms from Neighborhoods
CC	GO:0005759	mitochondrial matrix	IEP	Predict GO terms from Neighborhoods
CC	GO:0005956	protein kinase CK2 complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0006354	DNA-templated transcription elongation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006356	regulation of transcription by RNA polymerase I	IEP	Predict GO terms from Neighborhoods
BP	GO:0006366	transcription by RNA polymerase II	IEP	Predict GO terms from Neighborhoods
BP	GO:0006368	transcription elongation by RNA polymerase II promoter	IEP	Predict GO terms from Neighborhoods
BP	GO:0006378	mRNA polyadenylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006383	transcription by RNA polymerase III	IEP	Predict GO terms from Neighborhoods
BP	GO:0006397	mRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0006403	RNA localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0006405	RNA export from nucleus	IEP	Predict GO terms from Neighborhoods
BP	GO:0006406	mRNA export from nucleus	IEP	Predict GO terms from Neighborhoods
BP	GO:0006493	protein O-linked glycosylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006497	protein lipidation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006505	GPI anchor metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006506	GPI anchor biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006661	phosphatidylinositol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006730	one-carbon metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006760	folic acid-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006913	nucleocytoplasmic transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0007309	oocyte axis specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0007310	oocyte dorsal/ventral axis specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0007622	rhythmic behavior	IEP	Predict GO terms from Neighborhoods
BP	GO:0008062	eclosion rhythm	IEP	Predict GO terms from Neighborhoods
MF	GO:0008134	transcription factor binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0008143	poly(A) binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0008180	COP9 signalosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0008298	intracellular mRNA localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0008380	RNA splicing	IEP	Predict GO terms from Neighborhoods
CC	GO:0008541	proteasome regulatory particle, lid subcomplex	IEP	Predict GO terms from Neighborhoods
BP	GO:0009247	glycolipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009304	tRNA transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:0009396	folic acid-containing compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009950	dorsal/ventral axis specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0010257	NADH dehydrogenase complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0010387	COP9 signalosome assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0010569	regulation of double-strand break repair via homologous recombination	IEP	Predict GO terms from Neighborhoods
BP	GO:0010594	regulation of endothelial cell migration	IEP	Predict GO terms from Neighborhoods
BP	GO:0010596	negative regulation of endothelial cell migration	IEP	Predict GO terms from Neighborhoods
BP	GO:0010633	negative regulation of epithelial cell migration	IEP	Predict GO terms from Neighborhoods
BP	GO:0010862	positive regulation of pathway-restricted SMAD protein phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010921	regulation of phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015035	protein-disulfide reductase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015038	glutathione disulfide oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015931	nucleobase-containing compound transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0016070	RNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016093	polyprenol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0016234	inclusion body	IEP	Predict GO terms from Neighborhoods
BP	GO:0016319	mushroom body development	IEP	Predict GO terms from Neighborhoods
BP	GO:0016578	histone deubiquitination	IEP	Predict GO terms from Neighborhoods
MF	GO:0016782	transferase activity, transferring sulphur-containing groups	IEP	Predict GO terms from Neighborhoods
MF	GO:0016882	cyclo-ligase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016973	poly(A)+ mRNA export from nucleus	IEP	Predict GO terms from Neighborhoods
BP	GO:0018107	peptidyl-threonine phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0018210	peptidyl-threonine modification	IEP	Predict GO terms from Neighborhoods
MF	GO:0019208	phosphatase regulator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019221	cytokine-mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0019348	dolichol metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0019888	protein phosphatase regulator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0030234	enzyme regulator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0030272	5-formyltetrahydrofolate cyclo-ligase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0030289	protein phosphatase 4 complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0030336	negative regulation of cell migration	IEP	Predict GO terms from Neighborhoods
MF	GO:0030374	nuclear receptor coactivator activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0030425	dendrite	IEP	Predict GO terms from Neighborhoods
CC	GO:0030964	NADH dehydrogenase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0031100	animal organ regeneration	IEP	Predict GO terms from Neighborhoods
BP	GO:0031124	mRNA 3'-end processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0031445	regulation of heterochromatin formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0031453	positive regulation of heterochromatin formation	IEP	Predict GO terms from Neighborhoods
CC	GO:0031501	mannosyltransferase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0031519	PcG protein complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0031594	neuromuscular junction	IEP	Predict GO terms from Neighborhoods
BP	GO:0031936	obsolete negative regulation of chromatin silencing	IEP	Predict GO terms from Neighborhoods
CC	GO:0031974	membrane-enclosed lumen	IEP	Predict GO terms from Neighborhoods
CC	GO:0031983	vesicle lumen	IEP	Predict GO terms from Neighborhoods
BP	GO:0032774	RNA biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0032925	regulation of activin receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0032927	positive regulation of activin receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0032981	mitochondrial respiratory chain complex I assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0033108	mitochondrial respiratory chain complex assembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0033185	dolichol-phosphate-mannose synthase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0033211	adiponectin-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0033574	response to testosterone	IEP	Predict GO terms from Neighborhoods
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0034399	nuclear periphery	IEP	Predict GO terms from Neighborhoods
CC	GO:0034456	UTP-C complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0034774	secretory granule lumen	IEP	Predict GO terms from Neighborhoods
BP	GO:0035268	protein mannosylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0035269	protein O-linked mannosylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0035999	tetrahydrofolate interconversion	IEP	Predict GO terms from Neighborhoods
MF	GO:0036455	iron-sulfur transferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0040013	negative regulation of locomotion	IEP	Predict GO terms from Neighborhoods
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0042405	nuclear inclusion body	IEP	Predict GO terms from Neighborhoods
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042559	pteridine-containing compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042753	positive regulation of circadian rhythm	IEP	Predict GO terms from Neighborhoods
BP	GO:0042797	tRNA transcription by RNA polymerase III	IEP	Predict GO terms from Neighborhoods
CC	GO:0043005	neuron projection	IEP	Predict GO terms from Neighborhoods
CC	GO:0043025	neuronal cell body	IEP	Predict GO terms from Neighborhoods
MF	GO:0043035	chromatin insulator sequence binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0043233	organelle lumen	IEP	Predict GO terms from Neighborhoods
BP	GO:0043248	proteasome assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0043535	regulation of blood vessel endothelial cell migration	IEP	Predict GO terms from Neighborhoods
BP	GO:0043537	negative regulation of blood vessel endothelial cell migration	IEP	Predict GO terms from Neighborhoods
BP	GO:0043631	RNA polyadenylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0043666	regulation of phosphoprotein phosphatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0044297	cell body	IEP	Predict GO terms from Neighborhoods
BP	GO:0044571	[2Fe-2S] cluster assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0044572	[4Fe-4S] cluster assembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0044615	nuclear pore nuclear basket	IEP	Predict GO terms from Neighborhoods
CC	GO:0045271	respiratory chain complex I	IEP	Predict GO terms from Neighborhoods
BP	GO:0045475	locomotor rhythm	IEP	Predict GO terms from Neighborhoods
BP	GO:0046653	tetrahydrofolate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046655	folic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046676	negative regulation of insulin secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0046719	regulation by virus of viral protein levels in host cell	IEP	Predict GO terms from Neighborhoods
BP	GO:0046883	regulation of hormone secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0046888	negative regulation of hormone secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0048512	circadian behavior	IEP	Predict GO terms from Neighborhoods
BP	GO:0050657	nucleic acid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0050658	RNA transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0050709	negative regulation of protein secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0050790	regulation of catalytic activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0050796	regulation of insulin secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0051028	mRNA transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0051048	negative regulation of secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0051168	nuclear export	IEP	Predict GO terms from Neighborhoods
BP	GO:0051169	nuclear transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0051224	negative regulation of protein transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0051236	establishment of RNA localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051338	regulation of transferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0055029	nuclear DNA-directed RNA polymerase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0060205	cytoplasmic vesicle lumen	IEP	Predict GO terms from Neighborhoods
BP	GO:0060393	regulation of pathway-restricted SMAD protein phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0060562	epithelial tube morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0060810	intracellular mRNA localization involved in pattern specification process	IEP	Predict GO terms from Neighborhoods
BP	GO:0061154	endothelial tube morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0061178	regulation of insulin secretion involved in cellular response to glucose stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0061179	negative regulation of insulin secretion involved in cellular response to glucose stimulus	IEP	Predict GO terms from Neighborhoods
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	Predict GO terms from Neighborhoods
BP	GO:0065009	regulation of molecular function	IEP	Predict GO terms from Neighborhoods
CC	GO:0070013	intracellular organelle lumen	IEP	Predict GO terms from Neighborhoods
MF	GO:0070063	RNA polymerase binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0070390	transcription export complex 2	IEP	Predict GO terms from Neighborhoods
CC	GO:0070461	SAGA-type complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0070646	protein modification by small protein removal	IEP	Predict GO terms from Neighborhoods
MF	GO:0070742	C2H2 zinc finger domain binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0071219	cellular response to molecule of bacterial origin	IEP	Predict GO terms from Neighborhoods
BP	GO:0071222	cellular response to lipopolysaccharide	IEP	Predict GO terms from Neighborhoods
CC	GO:0071819	DUBm complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0080163	regulation of protein serine/threonine phosphatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0090052	regulation of pericentric heterochromatin formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0090053	positive regulation of pericentric heterochromatin formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0090087	regulation of peptide transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0090092	regulation of transmembrane receptor protein serine/threonine kinase signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0090100	positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0090276	regulation of peptide hormone secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0090278	negative regulation of peptide hormone secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0090304	nucleic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0097421	liver regeneration	IEP	Predict GO terms from Neighborhoods
BP	GO:0097428	protein maturation by iron-sulfur cluster transfer	IEP	Predict GO terms from Neighborhoods
BP	GO:0097502	mannosylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0097573	glutathione oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0097730	non-motile cilium	IEP	Predict GO terms from Neighborhoods
MF	GO:0097747	RNA polymerase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0098685	Schaffer collateral - CA1 synapse	IEP	Predict GO terms from Neighborhoods
MF	GO:0098772	molecular function regulator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0098781	ncRNA transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:0099170	postsynaptic modulation of chemical synaptic transmission	IEP	Predict GO terms from Neighborhoods
CC	GO:0099522	cytosolic region	IEP	Predict GO terms from Neighborhoods
CC	GO:0099523	presynaptic cytosol	IEP	Predict GO terms from Neighborhoods
BP	GO:0106034	protein maturation by [2Fe-2S] cluster transfer	IEP	Predict GO terms from Neighborhoods
BP	GO:0106035	protein maturation by [4Fe-4S] cluster transfer	IEP	Predict GO terms from Neighborhoods
BP	GO:0120261	regulation of heterochromatin organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0120263	positive regulation of heterochromatin organization	IEP	Predict GO terms from Neighborhoods
MF	GO:0140296	general transcription initiation factor binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0140535	intracellular protein-containing complex	IEP	Predict GO terms from Neighborhoods
CC	GO:1903293	phosphatase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:1903531	negative regulation of secretion by cell	IEP	Predict GO terms from Neighborhoods
BP	GO:1904245	regulation of polynucleotide adenylyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1904247	positive regulation of polynucleotide adenylyltransferase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:1904813	ficolin-1-rich granule lumen	IEP	Predict GO terms from Neighborhoods
BP	GO:1904950	negative regulation of establishment of protein localization	IEP	Predict GO terms from Neighborhoods
BP	GO:1905269	positive regulation of chromatin organization	IEP	Predict GO terms from Neighborhoods
CC	GO:1905368	peptidase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:2000146	negative regulation of cell motility	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001163	LSM_dom_euk/arc	11	74
IPR010920	LSM_dom_sf	8	122

External Links

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SOLTUB.AGRIA.G00000009451

Expression Profile

Co-expression Networks

Functional Annotation