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  5. SOLTUB.AGRIA.G00000009968

SOLTUB.AGRIA.G00000009968


Description : cotton fiber protein


Gene families : OG_02_0013517 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000009968
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_147


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000122 negative regulation of transcription by RNA polymerase II IEP Predict GO terms from Neighborhoods
CC GO:0000785 chromatin IEP Predict GO terms from Neighborhoods
CC GO:0000922 spindle pole IEP Predict GO terms from Neighborhoods
CC GO:0001650 fibrillar center IEP Predict GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003678 DNA helicase activity IEP Predict GO terms from Neighborhoods
MF GO:0003688 DNA replication origin binding IEP Predict GO terms from Neighborhoods
MF GO:0003690 double-stranded DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003697 single-stranded DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003727 single-stranded RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0004386 helicase activity IEP Predict GO terms from Neighborhoods
CC GO:0005813 centrosome IEP Predict GO terms from Neighborhoods
CC GO:0005815 microtubule organizing center IEP Predict GO terms from Neighborhoods
BP GO:0006282 regulation of DNA repair IEP Predict GO terms from Neighborhoods
BP GO:0006355 regulation of DNA-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0006356 regulation of transcription by RNA polymerase I IEP Predict GO terms from Neighborhoods
BP GO:0007063 regulation of sister chromatid cohesion IEP Predict GO terms from Neighborhoods
MF GO:0008094 ATP-dependent activity, acting on DNA IEP Predict GO terms from Neighborhoods
MF GO:0008186 ATP-dependent activity, acting on RNA IEP Predict GO terms from Neighborhoods
BP GO:0009646 response to absence of light IEP Predict GO terms from Neighborhoods
BP GO:0009739 response to gibberellin IEP Predict GO terms from Neighborhoods
BP GO:0009744 response to sucrose IEP Predict GO terms from Neighborhoods
BP GO:0009799 specification of symmetry IEP Predict GO terms from Neighborhoods
BP GO:0009855 determination of bilateral symmetry IEP Predict GO terms from Neighborhoods
BP GO:0009891 positive regulation of biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009893 positive regulation of metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009908 flower development IEP Predict GO terms from Neighborhoods
BP GO:0010035 response to inorganic substance IEP Predict GO terms from Neighborhoods
BP GO:0010115 regulation of abscisic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010116 positive regulation of abscisic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010252 auxin homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010638 positive regulation of organelle organization IEP Predict GO terms from Neighborhoods
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019747 regulation of isoprenoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030307 positive regulation of cell growth IEP Predict GO terms from Neighborhoods
CC GO:0030496 midbody IEP Predict GO terms from Neighborhoods
BP GO:0031297 replication fork processing IEP Predict GO terms from Neighborhoods
BP GO:0031325 positive regulation of cellular metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0031390 Ctf18 RFC-like complex IEP Predict GO terms from Neighborhoods
BP GO:0032069 regulation of nuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0032070 regulation of deoxyribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0032071 regulation of endodeoxyribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0032075 positive regulation of nuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0032077 positive regulation of deoxyribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0032079 positive regulation of endodeoxyribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0032091 negative regulation of protein binding IEP Predict GO terms from Neighborhoods
BP GO:0032392 DNA geometric change IEP Predict GO terms from Neighborhoods
BP GO:0032508 DNA duplex unwinding IEP Predict GO terms from Neighborhoods
BP GO:0033044 regulation of chromosome organization IEP Predict GO terms from Neighborhoods
BP GO:0034285 response to disaccharide IEP Predict GO terms from Neighborhoods
BP GO:0035561 regulation of chromatin binding IEP Predict GO terms from Neighborhoods
BP GO:0035563 positive regulation of chromatin binding IEP Predict GO terms from Neighborhoods
BP GO:0043085 positive regulation of catalytic activity IEP Predict GO terms from Neighborhoods
BP GO:0043086 negative regulation of catalytic activity IEP Predict GO terms from Neighborhoods
MF GO:0043139 5'-3' DNA helicase activity IEP Predict GO terms from Neighborhoods
BP GO:0043393 regulation of protein binding IEP Predict GO terms from Neighborhoods
MF GO:0043565 sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0044092 negative regulation of molecular function IEP Predict GO terms from Neighborhoods
BP GO:0044806 G-quadruplex DNA unwinding IEP Predict GO terms from Neighborhoods
BP GO:0045005 DNA-templated DNA replication maintenance of fidelity IEP Predict GO terms from Neighborhoods
MF GO:0045142 triplex DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0045739 positive regulation of DNA repair IEP Predict GO terms from Neighborhoods
BP GO:0045787 positive regulation of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0045828 positive regulation of isoprenoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045834 positive regulation of lipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045876 positive regulation of sister chromatid cohesion IEP Predict GO terms from Neighborhoods
BP GO:0045893 positive regulation of DNA-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0045927 positive regulation of growth IEP Predict GO terms from Neighborhoods
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045943 positive regulation of transcription by RNA polymerase I IEP Predict GO terms from Neighborhoods
BP GO:0046889 positive regulation of lipid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046890 regulation of lipid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0047484 regulation of response to osmotic stress IEP Predict GO terms from Neighborhoods
BP GO:0048262 determination of dorsal/ventral asymmetry IEP Predict GO terms from Neighborhoods
BP GO:0048527 lateral root development IEP Predict GO terms from Neighborhoods
BP GO:0048528 post-embryonic root development IEP Predict GO terms from Neighborhoods
BP GO:0048639 positive regulation of developmental growth IEP Predict GO terms from Neighborhoods
BP GO:0050790 regulation of catalytic activity IEP Predict GO terms from Neighborhoods
BP GO:0051052 regulation of DNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051054 positive regulation of DNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051098 regulation of binding IEP Predict GO terms from Neighborhoods
BP GO:0051099 positive regulation of binding IEP Predict GO terms from Neighborhoods
BP GO:0051100 negative regulation of binding IEP Predict GO terms from Neighborhoods
BP GO:0051128 regulation of cellular component organization IEP Predict GO terms from Neighborhoods
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051252 regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051254 positive regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051276 chromosome organization IEP Predict GO terms from Neighborhoods
BP GO:0051336 regulation of hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0051341 regulation of oxidoreductase activity IEP Predict GO terms from Neighborhoods
BP GO:0051345 positive regulation of hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0051354 negative regulation of oxidoreductase activity IEP Predict GO terms from Neighborhoods
MF GO:0051880 G-quadruplex DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0062013 positive regulation of small molecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0065009 regulation of molecular function IEP Predict GO terms from Neighborhoods
BP GO:0071103 DNA conformation change IEP Predict GO terms from Neighborhoods
BP GO:0071241 cellular response to inorganic substance IEP Predict GO terms from Neighborhoods
BP GO:0071417 cellular response to organonitrogen compound IEP Predict GO terms from Neighborhoods
BP GO:0072710 response to hydroxyurea IEP Predict GO terms from Neighborhoods
BP GO:0072711 cellular response to hydroxyurea IEP Predict GO terms from Neighborhoods
BP GO:0072718 response to cisplatin IEP Predict GO terms from Neighborhoods
BP GO:0072719 cellular response to cisplatin IEP Predict GO terms from Neighborhoods
BP GO:0080134 regulation of response to stress IEP Predict GO terms from Neighborhoods
BP GO:0090068 positive regulation of cell cycle process IEP Predict GO terms from Neighborhoods
BP GO:0090567 reproductive shoot system development IEP Predict GO terms from Neighborhoods
BP GO:0090696 post-embryonic plant organ development IEP Predict GO terms from Neighborhoods
BP GO:0090697 post-embryonic plant organ morphogenesis IEP Predict GO terms from Neighborhoods
MF GO:0140097 catalytic activity, acting on DNA IEP Predict GO terms from Neighborhoods
BP GO:0140747 regulation of ncRNA transcription IEP Predict GO terms from Neighborhoods
BP GO:1900618 regulation of shoot system morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:1901000 regulation of response to salt stress IEP Predict GO terms from Neighborhoods
BP GO:1901001 negative regulation of response to salt stress IEP Predict GO terms from Neighborhoods
BP GO:1901371 regulation of leaf morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:1901652 response to peptide IEP Predict GO terms from Neighborhoods
BP GO:1901653 cellular response to peptide IEP Predict GO terms from Neighborhoods
BP GO:1901699 cellular response to nitrogen compound IEP Predict GO terms from Neighborhoods
BP GO:1901836 regulation of transcription of nucleolar large rRNA by RNA polymerase I IEP Predict GO terms from Neighborhoods
BP GO:1901838 positive regulation of transcription of nucleolar large rRNA by RNA polymerase I IEP Predict GO terms from Neighborhoods
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902930 regulation of alcohol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902932 positive regulation of alcohol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:1904975 response to bleomycin IEP Predict GO terms from Neighborhoods
BP GO:1904976 cellular response to bleomycin IEP Predict GO terms from Neighborhoods
BP GO:1905421 regulation of plant organ morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:1905613 regulation of developmental vegetative growth IEP Predict GO terms from Neighborhoods
BP GO:1905615 positive regulation of developmental vegetative growth IEP Predict GO terms from Neighborhoods
BP GO:1990700 nucleolar chromatin organization IEP Predict GO terms from Neighborhoods
MF GO:1990837 sequence-specific double-stranded DNA binding IEP Predict GO terms from Neighborhoods
BP GO:2000468 regulation of peroxidase activity IEP Predict GO terms from Neighborhoods
BP GO:2000469 negative regulation of peroxidase activity IEP Predict GO terms from Neighborhoods
BP GO:2000779 regulation of double-strand break repair IEP Predict GO terms from Neighborhoods
BP GO:2000781 positive regulation of double-strand break repair IEP Predict GO terms from Neighborhoods
BP GO:2001020 regulation of response to DNA damage stimulus IEP Predict GO terms from Neighborhoods
BP GO:2001022 positive regulation of response to DNA damage stimulus IEP Predict GO terms from Neighborhoods
BP GO:2001141 regulation of RNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2001252 positive regulation of chromosome organization IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR008480 DUF761_pln 128 162
No external refs found!