SOLTUB.AGRIA.G00000010467


Description : Sister chromatid cohesion 1 protein 3


Gene families : OG_02_0025774 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000010467
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_136


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000036 acyl carrier activity IEP Predict GO terms from Neighborhoods
CC GO:0000322 storage vacuole IEP Predict GO terms from Neighborhoods
CC GO:0000323 lytic vacuole IEP Predict GO terms from Neighborhoods
CC GO:0000325 plant-type vacuole IEP Predict GO terms from Neighborhoods
CC GO:0000326 protein storage vacuole IEP Predict GO terms from Neighborhoods
BP GO:0003008 system process IEP Predict GO terms from Neighborhoods
BP GO:0003014 renal system process IEP Predict GO terms from Neighborhoods
MF GO:0004175 endopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004197 cysteine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0005615 extracellular space IEP Predict GO terms from Neighborhoods
CC GO:0005618 cell wall IEP Predict GO terms from Neighborhoods
CC GO:0005764 lysosome IEP Predict GO terms from Neighborhoods
CC GO:0005768 endosome IEP Predict GO terms from Neighborhoods
CC GO:0005773 vacuole IEP Predict GO terms from Neighborhoods
BP GO:0006508 proteolysis IEP Predict GO terms from Neighborhoods
BP GO:0006624 vacuolar protein processing IEP Predict GO terms from Neighborhoods
BP GO:0007033 vacuole organization IEP Predict GO terms from Neighborhoods
BP GO:0007035 vacuolar acidification IEP Predict GO terms from Neighborhoods
BP GO:0007610 behavior IEP Predict GO terms from Neighborhoods
BP GO:0007611 learning or memory IEP Predict GO terms from Neighborhoods
BP GO:0008219 cell death IEP Predict GO terms from Neighborhoods
MF GO:0008233 peptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0008234 cysteine-type peptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0008306 associative learning IEP Predict GO terms from Neighborhoods
MF GO:0008395 steroid hydroxylase activity IEP Predict GO terms from Neighborhoods
MF GO:0008553 P-type proton-exporting transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0009505 plant-type cell wall IEP Predict GO terms from Neighborhoods
BP GO:0009608 response to symbiont IEP Predict GO terms from Neighborhoods
BP GO:0009610 response to symbiotic fungus IEP Predict GO terms from Neighborhoods
BP GO:0009611 response to wounding IEP Predict GO terms from Neighborhoods
BP GO:0009620 response to fungus IEP Predict GO terms from Neighborhoods
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0009698 phenylpropanoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009699 phenylpropanoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009714 chalcone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009715 chalcone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009719 response to endogenous stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009723 response to ethylene IEP Predict GO terms from Neighborhoods
BP GO:0009725 response to hormone IEP Predict GO terms from Neighborhoods
BP GO:0009751 response to salicylic acid IEP Predict GO terms from Neighborhoods
BP GO:0009753 response to jasmonic acid IEP Predict GO terms from Neighborhoods
BP GO:0009813 flavonoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009871 jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009970 cellular response to sulfate starvation IEP Predict GO terms from Neighborhoods
BP GO:0010148 transpiration IEP Predict GO terms from Neighborhoods
BP GO:0010150 leaf senescence IEP Predict GO terms from Neighborhoods
BP GO:0010184 cytokinin transport IEP Predict GO terms from Neighborhoods
BP GO:0010214 seed coat development IEP Predict GO terms from Neighborhoods
BP GO:0010222 stem vascular tissue pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010247 detection of phosphate ion IEP Predict GO terms from Neighborhoods
BP GO:0010447 response to acidic pH IEP Predict GO terms from Neighborhoods
BP GO:0012501 programmed cell death IEP Predict GO terms from Neighborhoods
BP GO:0014070 response to organic cyclic compound IEP Predict GO terms from Neighborhoods
MF GO:0015114 phosphate ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015399 primary active transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015662 P-type ion transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0016104 triterpenoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016105 triterpenoid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016145 S-glycoside catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016210 naringenin-chalcone synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0016485 protein processing IEP Predict GO terms from Neighborhoods
MF GO:0016787 hydrolase activity IEP Predict GO terms from Neighborhoods
CC GO:0018995 host cellular component IEP Predict GO terms from Neighborhoods
BP GO:0019741 pentacyclic triterpenoid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019745 pentacyclic triterpenoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019748 secondary metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019759 glycosinolate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019762 glucosinolate catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0022804 active transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0030312 external encapsulating structure IEP Predict GO terms from Neighborhoods
BP GO:0030334 regulation of cell migration IEP Predict GO terms from Neighborhoods
BP GO:0030335 positive regulation of cell migration IEP Predict GO terms from Neighborhoods
BP GO:0030638 polyketide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030639 polyketide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0030656 regulation of vitamin metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0031012 extracellular matrix IEP Predict GO terms from Neighborhoods
MF GO:0031177 phosphopantetheine binding IEP Predict GO terms from Neighborhoods
BP GO:0032103 positive regulation of response to external stimulus IEP Predict GO terms from Neighborhoods
BP GO:0032801 receptor catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0033643 host cell part IEP Predict GO terms from Neighborhoods
CC GO:0033644 host cell membrane IEP Predict GO terms from Neighborhoods
BP GO:0033993 response to lipid IEP Predict GO terms from Neighborhoods
CC GO:0034081 polyketide synthase complex IEP Predict GO terms from Neighborhoods
BP GO:0036377 arbuscular mycorrhizal association IEP Predict GO terms from Neighborhoods
BP GO:0040009 regulation of growth rate IEP Predict GO terms from Neighborhoods
BP GO:0040012 regulation of locomotion IEP Predict GO terms from Neighborhoods
BP GO:0040015 negative regulation of multicellular organism growth IEP Predict GO terms from Neighborhoods
BP GO:0040017 positive regulation of locomotion IEP Predict GO terms from Neighborhoods
BP GO:0042180 cellular ketone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042181 ketone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042335 cuticle development IEP Predict GO terms from Neighborhoods
BP GO:0042344 indole glucosinolate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042436 indole-containing compound catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0043112 receptor metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044273 sulfur compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044403 biological process involved in symbiotic interaction IEP Predict GO terms from Neighborhoods
BP GO:0044550 secondary metabolite biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0044620 ACP phosphopantetheine attachment site binding IEP Predict GO terms from Neighborhoods
MF GO:0046409 p-coumarate 3-hydroxylase activity IEP Predict GO terms from Neighborhoods
BP GO:0046622 positive regulation of organ growth IEP Predict GO terms from Neighborhoods
CC GO:0048225 suberin network IEP Predict GO terms from Neighborhoods
BP GO:0050806 positive regulation of synaptic transmission IEP Predict GO terms from Neighborhoods
BP GO:0050877 nervous system process IEP Predict GO terms from Neighborhoods
BP GO:0050890 cognition IEP Predict GO terms from Neighborhoods
BP GO:0050920 regulation of chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:0050921 positive regulation of chemotaxis IEP Predict GO terms from Neighborhoods
MF GO:0051192 prosthetic group binding IEP Predict GO terms from Neighborhoods
BP GO:0051239 regulation of multicellular organismal process IEP Predict GO terms from Neighborhoods
BP GO:0051452 intracellular pH reduction IEP Predict GO terms from Neighborhoods
BP GO:0051603 proteolysis involved in protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051604 protein maturation IEP Predict GO terms from Neighborhoods
BP GO:0055067 monovalent inorganic cation homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055078 sodium ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0060416 response to growth hormone IEP Predict GO terms from Neighborhoods
CC GO:0070505 pollen coat IEP Predict GO terms from Neighborhoods
BP GO:0070542 response to fatty acid IEP Predict GO terms from Neighborhoods
CC GO:0085042 periarbuscular membrane IEP Predict GO terms from Neighborhoods
BP GO:0090693 plant organ senescence IEP Predict GO terms from Neighborhoods
BP GO:0090709 regulation of timing of plant organ formation IEP Predict GO terms from Neighborhoods
BP GO:0097061 dendritic spine organization IEP Predict GO terms from Neighborhoods
BP GO:0099173 postsynapse organization IEP Predict GO terms from Neighborhoods
BP GO:0106027 neuron projection organization IEP Predict GO terms from Neighborhoods
MF GO:0140358 P-type transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0140414 phosphopantetheine-dependent carrier activity IEP Predict GO terms from Neighborhoods
BP GO:1900271 regulation of long-term synaptic potentiation IEP Predict GO terms from Neighborhoods
BP GO:1900273 positive regulation of long-term synaptic potentiation IEP Predict GO terms from Neighborhoods
BP GO:1901000 regulation of response to salt stress IEP Predict GO terms from Neighborhoods
BP GO:1901185 negative regulation of ERBB signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1901656 glycoside transport IEP Predict GO terms from Neighborhoods
MF GO:1901683 arsenate ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:1901684 arsenate ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1901696 cannabinoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902381 11-oxo-beta-amyrin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902382 11-oxo-beta-amyrin catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902384 glycyrrhetinate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902386 glycyrrhetinate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903034 regulation of response to wounding IEP Predict GO terms from Neighborhoods
BP GO:1905428 regulation of plant organ formation IEP Predict GO terms from Neighborhoods
BP GO:1990019 protein storage vacuole organization IEP Predict GO terms from Neighborhoods
BP GO:1990069 stomatal opening IEP Predict GO terms from Neighborhoods
BP GO:2000082 regulation of L-ascorbic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2000145 regulation of cell motility IEP Predict GO terms from Neighborhoods
BP GO:2000147 positive regulation of cell motility IEP Predict GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!