SOLTUB.AGRIA.G00000012525

Description : ATP-dependent RNA helicase

Gene families : OG_02_0019283 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000012525
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_27

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0000287	magnesium ion binding	IEA	AHRD
MF	GO:0000976	transcription cis-regulatory region binding	None	Extended
MF	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	None	Extended
MF	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IEA	AHRD
MF	GO:0000987	cis-regulatory region sequence-specific DNA binding	None	Extended
MF	GO:0001067	transcription regulatory region nucleic acid binding	None	Extended
BP	GO:0001503	ossification	IEA	AHRD
BP	GO:0001731	formation of translation preinitiation complex	IEA	AHRD
BP	GO:0001817	regulation of cytokine production	None	Extended
BP	GO:0001819	positive regulation of cytokine production	None	Extended
BP	GO:0002682	regulation of immune system process	None	Extended
BP	GO:0002684	positive regulation of immune system process	None	Extended
BP	GO:0002697	regulation of immune effector process	None	Extended
BP	GO:0002699	positive regulation of immune effector process	None	Extended
BP	GO:0002700	regulation of production of molecular mediator of immune response	None	Extended
BP	GO:0002702	positive regulation of production of molecular mediator of immune response	None	Extended
BP	GO:0002703	regulation of leukocyte mediated immunity	None	Extended
BP	GO:0002705	positive regulation of leukocyte mediated immunity	None	Extended
BP	GO:0002718	regulation of cytokine production involved in immune response	None	Extended
BP	GO:0002720	positive regulation of cytokine production involved in immune response	None	Extended
BP	GO:0002730	regulation of dendritic cell cytokine production	None	Extended
BP	GO:0002732	positive regulation of dendritic cell cytokine production	None	Extended
BP	GO:0002733	regulation of myeloid dendritic cell cytokine production	None	Extended
BP	GO:0002735	positive regulation of myeloid dendritic cell cytokine production	IEA	AHRD
BP	GO:0002886	regulation of myeloid leukocyte mediated immunity	None	Extended
BP	GO:0002888	positive regulation of myeloid leukocyte mediated immunity	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003678	DNA helicase activity	IEA	AHRD
MF	GO:0003682	chromatin binding	IEA	AHRD
MF	GO:0003690	double-stranded DNA binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003724	RNA helicase activity	IEA	AHRD
MF	GO:0003725	double-stranded RNA binding	IEA	AHRD
MF	GO:0003729	mRNA binding	None	Extended
MF	GO:0003730	mRNA 3'-UTR binding	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005524	ATP binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005654	nucleoplasm	IEA	AHRD
CC	GO:0005694	chromosome	IEA	AHRD
CC	GO:0005739	mitochondrion	IEA	AHRD
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006357	regulation of transcription by RNA polymerase II	None	Extended
BP	GO:0006417	regulation of translation	None	Extended
BP	GO:0006950	response to stress	IEA	AHRD
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007417	central nervous system development	IEA	AHRD
MF	GO:0008094	ATP-dependent activity, acting on DNA	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008186	ATP-dependent activity, acting on RNA	None	Extended
MF	GO:0008494	translation activator activity	IEA	AHRD
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009615	response to virus	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	IEA	AHRD
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009890	negative regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009894	regulation of catabolic process	None	Extended
BP	GO:0009895	negative regulation of catabolic process	None	Extended
BP	GO:0009896	positive regulation of catabolic process	None	Extended
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0009967	positive regulation of signal transduction	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
CC	GO:0010494	cytoplasmic stress granule	IEA	AHRD
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010608	post-transcriptional regulation of gene expression	None	Extended
BP	GO:0010628	positive regulation of gene expression	None	Extended
BP	GO:0010629	negative regulation of gene expression	None	Extended
BP	GO:0010638	positive regulation of organelle organization	None	Extended
BP	GO:0010646	regulation of cell communication	None	Extended
BP	GO:0010647	positive regulation of cell communication	None	Extended
BP	GO:0010720	positive regulation of cell development	None	Extended
BP	GO:0010769	regulation of cell morphogenesis involved in differentiation	None	Extended
BP	GO:0010770	positive regulation of cell morphogenesis involved in differentiation	None	Extended
BP	GO:0010975	regulation of neuron projection development	None	Extended
BP	GO:0010976	positive regulation of neuron projection development	None	Extended
BP	GO:0014070	response to organic cyclic compound	None	Extended
CC	GO:0015935	small ribosomal subunit	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
CC	GO:0016282	eukaryotic 43S preinitiation complex	IEA	AHRD
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEA	AHRD
BP	GO:0017148	negative regulation of translation	IEA	AHRD
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
BP	GO:0022603	regulation of anatomical structure morphogenesis	None	Extended
BP	GO:0022604	regulation of cell morphogenesis	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0022618	ribonucleoprotein complex assembly	None	Extended
CC	GO:0022627	cytosolic small ribosomal subunit	IEA	AHRD
BP	GO:0023051	regulation of signaling	None	Extended
BP	GO:0023056	positive regulation of signaling	None	Extended
CC	GO:0030424	axon	IEA	AHRD
CC	GO:0030425	dendrite	IEA	AHRD
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031327	negative regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0031329	regulation of cellular catabolic process	None	Extended
BP	GO:0031330	negative regulation of cellular catabolic process	None	Extended
BP	GO:0031331	positive regulation of cellular catabolic process	None	Extended
BP	GO:0031344	regulation of cell projection organization	None	Extended
BP	GO:0031346	positive regulation of cell projection organization	None	Extended
BP	GO:0032204	regulation of telomere maintenance	None	Extended
BP	GO:0032206	positive regulation of telomere maintenance	IEA	AHRD
BP	GO:0032392	DNA geometric change	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0032879	regulation of localization	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033043	regulation of organelle organization	None	Extended
BP	GO:0033044	regulation of chromosome organization	None	Extended
BP	GO:0034248	regulation of cellular amide metabolic process	None	Extended
BP	GO:0034249	negative regulation of cellular amide metabolic process	None	Extended
BP	GO:0034250	positive regulation of cellular amide metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
CC	GO:0035770	ribonucleoprotein granule	None	Extended
MF	GO:0035925	mRNA 3'-UTR AU-rich region binding	IEA	AHRD
MF	GO:0036094	small molecule binding	None	Extended
CC	GO:0036464	cytoplasmic ribonucleoprotein granule	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042255	ribosome assembly	IEA	AHRD
MF	GO:0042826	histone deacetylase binding	IEA	AHRD
CC	GO:0042995	cell projection	None	Extended
CC	GO:0043005	neuron projection	None	Extended
MF	GO:0043021	ribonucleoprotein complex binding	None	Extended
MF	GO:0043024	ribosomal small subunit binding	IEA	AHRD
BP	GO:0043122	regulation of I-kappaB kinase/NF-kappaB signaling	None	Extended
BP	GO:0043123	positive regulation of I-kappaB kinase/NF-kappaB signaling	IEA	AHRD
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043204	perikaryon	IEA	AHRD
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043330	response to exogenous dsRNA	IEA	AHRD
BP	GO:0043331	response to dsRNA	None	Extended
BP	GO:0043487	regulation of RNA stability	None	Extended
BP	GO:0043488	regulation of mRNA stability	IEA	AHRD
BP	GO:0043489	RNA stabilization	None	Extended
MF	GO:0043565	sequence-specific DNA binding	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
CC	GO:0044391	ribosomal subunit	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0044806	G-quadruplex DNA unwinding	IEA	AHRD
MF	GO:0044877	protein-containing complex binding	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0045595	regulation of cell differentiation	None	Extended
BP	GO:0045597	positive regulation of cell differentiation	None	Extended
BP	GO:0045727	positive regulation of translation	IEA	AHRD
BP	GO:0045893	positive regulation of DNA-templated transcription	None	Extended
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0045944	positive regulation of transcription by RNA polymerase II	None	Extended
BP	GO:0045995	regulation of embryonic development	IEA	AHRD
BP	GO:0046685	response to arsenic-containing substance	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048584	positive regulation of response to stimulus	None	Extended
BP	GO:0048731	system development	None	Extended
BP	GO:0048814	regulation of dendrite morphogenesis	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050767	regulation of neurogenesis	None	Extended
BP	GO:0050769	positive regulation of neurogenesis	None	Extended
BP	GO:0050773	regulation of dendrite development	None	Extended
BP	GO:0050775	positive regulation of dendrite morphogenesis	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050807	regulation of synapse organization	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051052	regulation of DNA metabolic process	None	Extended
BP	GO:0051054	positive regulation of DNA metabolic process	None	Extended
BP	GO:0051094	positive regulation of developmental process	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051130	positive regulation of cellular component organization	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051240	positive regulation of multicellular organismal process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051247	positive regulation of protein metabolic process	None	Extended
BP	GO:0051248	negative regulation of protein metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051253	negative regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
MF	GO:0051880	G-quadruplex DNA binding	IEA	AHRD
BP	GO:0051890	regulation of cardioblast differentiation	None	Extended
BP	GO:0051891	positive regulation of cardioblast differentiation	IEA	AHRD
BP	GO:0051960	regulation of nervous system development	None	Extended
BP	GO:0051962	positive regulation of nervous system development	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0060260	regulation of transcription initiation by RNA polymerase II	None	Extended
BP	GO:0060261	positive regulation of transcription initiation by RNA polymerase II	IEA	AHRD
BP	GO:0060284	regulation of cell development	None	Extended
BP	GO:0060341	regulation of cellular localization	None	Extended
BP	GO:0060998	regulation of dendritic spine development	None	Extended
BP	GO:0060999	positive regulation of dendritic spine development	None	Extended
BP	GO:0061001	regulation of dendritic spine morphogenesis	None	Extended
BP	GO:0061003	positive regulation of dendritic spine morphogenesis	IEA	AHRD
BP	GO:0061013	regulation of mRNA catabolic process	None	Extended
BP	GO:0061014	positive regulation of mRNA catabolic process	IEA	AHRD
BP	GO:0061081	positive regulation of myeloid leukocyte cytokine production involved in immune response	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
MF	GO:0070883	pre-miRNA binding	IEA	AHRD
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0070925	organelle assembly	None	Extended
CC	GO:0070993	translation preinitiation complex	None	Extended
BP	GO:0071103	DNA conformation change	None	Extended
BP	GO:0071243	cellular response to arsenic-containing substance	None	Extended
BP	GO:0071826	ribonucleoprotein complex subunit organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
BP	GO:0090669	telomerase RNA stabilization	IEA	AHRD
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0099080	supramolecular complex	None	Extended
BP	GO:0099175	regulation of postsynapse organization	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:0120025	plasma membrane bounded cell projection	None	Extended
BP	GO:0120035	regulation of plasma membrane bounded cell projection organization	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
BP	GO:0140694	non-membrane-bounded organelle assembly	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901532	regulation of hematopoietic progenitor cell differentiation	None	Extended
BP	GO:1901534	positive regulation of hematopoietic progenitor cell differentiation	IEA	AHRD
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1901701	cellular response to oxygen-containing compound	None	Extended
BP	GO:1902064	obsolete regulation of transcription from RNA polymerase II promoter involved in spermatogenesis	IEA	AHRD
BP	GO:1902369	negative regulation of RNA catabolic process	None	Extended
BP	GO:1902531	regulation of intracellular signal transduction	None	Extended
BP	GO:1902533	positive regulation of intracellular signal transduction	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903311	regulation of mRNA metabolic process	None	Extended
BP	GO:1903313	positive regulation of mRNA metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903842	response to arsenite ion	None	Extended
BP	GO:1903843	cellular response to arsenite ion	IEA	AHRD
BP	GO:1904580	regulation of intracellular mRNA localization	None	Extended
BP	GO:1904582	positive regulation of intracellular mRNA localization	IEA	AHRD
BP	GO:1905207	regulation of cardiocyte differentiation	None	Extended
BP	GO:1905209	positive regulation of cardiocyte differentiation	None	Extended
MF	GO:1990837	sequence-specific double-stranded DNA binding	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2000113	negative regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2000142	regulation of DNA-templated transcription initiation	None	Extended
BP	GO:2000144	positive regulation of DNA-templated transcription initiation	None	Extended
BP	GO:2000736	regulation of stem cell differentiation	None	Extended
BP	GO:2000738	positive regulation of stem cell differentiation	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended
BP	GO:2001252	positive regulation of chromosome organization	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000086	G2/M transition of mitotic cell cycle	IEP	Predict GO terms from Neighborhoods
MF	GO:0000175	3'-5'-exoribonuclease activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0000177	cytoplasmic exosome (RNase complex)	IEP	Predict GO terms from Neighborhoods
CC	GO:0000178	exosome (RNase complex)	IEP	Predict GO terms from Neighborhoods
BP	GO:0000820	regulation of glutamine family amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0000967	rRNA 5'-end processing	IEP	Predict GO terms from Neighborhoods
CC	GO:0001726	ruffle	IEP	Predict GO terms from Neighborhoods
BP	GO:0001818	negative regulation of cytokine production	IEP	Predict GO terms from Neighborhoods
BP	GO:0001845	phagolysosome assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0002791	regulation of peptide secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0002792	negative regulation of peptide secretion	IEP	Predict GO terms from Neighborhoods
MF	GO:0003746	translation elongation factor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0003950	NAD+ ADP-ribosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0003951	NAD+ kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004222	metalloendopeptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004407	histone deacetylase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004518	nuclease activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004532	exoribonuclease activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004540	ribonuclease activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004672	protein kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004690	cyclic nucleotide-dependent protein kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004691	cAMP-dependent protein kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005315	inorganic phosphate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005759	mitochondrial matrix	IEP	Predict GO terms from Neighborhoods
CC	GO:0005767	secondary lysosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0005952	cAMP-dependent protein kinase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0005979	regulation of glycogen biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006351	DNA-templated transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:0006396	RNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0006397	mRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0006401	RNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006402	mRNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006468	protein phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006471	protein ADP-ribosylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006476	protein deacetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006541	glutamine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006739	NADP metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006741	NADP biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006787	porphyrin-containing compound catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006807	nitrogen compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0006995	cellular response to nitrogen starvation	IEP	Predict GO terms from Neighborhoods
BP	GO:0007091	metaphase/anaphase transition of mitotic cell cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0007254	JNK cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0008152	metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0008237	metallopeptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008312	7S RNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0008859	exoribonuclease II activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008995	ribonuclease E activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008996	ribonuclease G activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009059	macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009532	plastid stroma	IEP	Predict GO terms from Neighborhoods
CC	GO:0009536	plastid	IEP	Predict GO terms from Neighborhoods
CC	GO:0009570	chloroplast stroma	IEP	Predict GO terms from Neighborhoods
CC	GO:0009579	thylakoid	IEP	Predict GO terms from Neighborhoods
BP	GO:0009639	response to red or far red light	IEP	Predict GO terms from Neighborhoods
BP	GO:0009642	response to light intensity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009643	photosynthetic acclimation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009644	response to high light intensity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009657	plastid organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009658	chloroplast organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009903	chloroplast avoidance movement	IEP	Predict GO terms from Neighborhoods
BP	GO:0009904	chloroplast accumulation movement	IEP	Predict GO terms from Neighborhoods
BP	GO:0010109	regulation of photosynthesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010114	response to red light	IEP	Predict GO terms from Neighborhoods
BP	GO:0010239	chloroplast mRNA processing	IEP	Predict GO terms from Neighborhoods
CC	GO:0010287	plastoglobule	IEP	Predict GO terms from Neighborhoods
BP	GO:0010343	singlet oxygen-mediated programmed cell death	IEP	Predict GO terms from Neighborhoods
BP	GO:0010648	negative regulation of cell communication	IEP	Predict GO terms from Neighborhoods
BP	GO:0010677	negative regulation of cellular carbohydrate metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0012510	trans-Golgi network transport vesicle membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0015996	chlorophyll catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016070	RNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016071	mRNA metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016301	kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016485	protein processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0016572	obsolete histone phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0016575	histone deacetylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Predict GO terms from Neighborhoods
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016896	exoribonuclease activity, producing 5'-phosphomonoesters	IEP	Predict GO terms from Neighborhoods
MF	GO:0017151	DEAD/H-box RNA helicase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0018105	peptidyl-serine phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0018107	peptidyl-threonine phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0018193	peptidyl-amino acid modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0018209	peptidyl-serine modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0018210	peptidyl-threonine modification	IEP	Predict GO terms from Neighborhoods
MF	GO:0019213	deacetylase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019216	regulation of lipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019359	nicotinamide nucleotide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019363	pyridine nucleotide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019439	aromatic compound catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019538	protein metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019750	chloroplast localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0022411	cellular component disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0023057	negative regulation of signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0030431	sleep	IEP	Predict GO terms from Neighborhoods
CC	GO:0030660	Golgi-associated vesicle membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0031098	stress-activated protein kinase signaling cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0031137	regulation of conjugation with cellular fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0031138	negative regulation of conjugation with cellular fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0031279	regulation of cyclase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0031304	intrinsic component of mitochondrial inner membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031305	integral component of mitochondrial inner membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031464	Cul4A-RING E3 ubiquitin ligase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0031514	motile cilium	IEP	Predict GO terms from Neighborhoods
MF	GO:0031624	ubiquitin conjugating enzyme binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0031647	regulation of protein stability	IEP	Predict GO terms from Neighborhoods
CC	GO:0031966	mitochondrial membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0032010	phagolysosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0032201	telomere maintenance via semi-conservative replication	IEP	Predict GO terms from Neighborhoods
BP	GO:0032479	regulation of type I interferon production	IEP	Predict GO terms from Neighborhoods
BP	GO:0032480	negative regulation of type I interferon production	IEP	Predict GO terms from Neighborhoods
BP	GO:0032543	mitochondrial translation	IEP	Predict GO terms from Neighborhoods
BP	GO:0032774	RNA biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0032790	ribosome disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0033015	tetrapyrrole catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033554	cellular response to stress	IEP	Predict GO terms from Neighborhoods
MF	GO:0033558	protein lysine deacetylase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0034098	VCP-NPL4-UFD1 AAA ATPase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0034471	ncRNA 5'-end processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0034979	NAD-dependent protein deacetylase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0034983	peptidyl-lysine deacetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0035435	phosphate ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0036126	sperm flagellum	IEP	Predict GO terms from Neighborhoods
BP	GO:0036260	RNA capping	IEP	Predict GO terms from Neighborhoods
BP	GO:0036473	cell death in response to oxidative stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0039531	regulation of viral-induced cytoplasmic pattern recognition receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0039532	negative regulation of viral-induced cytoplasmic pattern recognition receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0039535	regulation of RIG-I signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0039536	negative regulation of RIG-I signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0042549	photosystem II stabilization	IEP	Predict GO terms from Neighborhoods
MF	GO:0042736	NADH kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042793	plastid transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:0043170	macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043406	positive regulation of MAP kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043506	regulation of JUN kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043507	positive regulation of JUN kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043562	cellular response to nitrogen levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0043576	regulation of respiratory gaseous exchange	IEP	Predict GO terms from Neighborhoods
BP	GO:0043970	histone H3-K9 acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0044238	primary metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044249	cellular biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0044390	ubiquitin-like protein conjugating enzyme binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0044784	metaphase/anaphase transition of cell cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0044839	cell cycle G2/M phase transition	IEP	Predict GO terms from Neighborhoods
BP	GO:0045719	negative regulation of glycogen biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045834	positive regulation of lipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045922	negative regulation of fatty acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046020	obsolete negative regulation of transcription from RNA polymerase II promoter by pheromones	IEP	Predict GO terms from Neighborhoods
BP	GO:0046149	pigment catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046320	regulation of fatty acid oxidation	IEP	Predict GO terms from Neighborhoods
BP	GO:0046322	negative regulation of fatty acid oxidation	IEP	Predict GO terms from Neighborhoods
BP	GO:0046483	heterocycle metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046596	regulation of viral entry into host cell	IEP	Predict GO terms from Neighborhoods
BP	GO:0046597	negative regulation of viral entry into host cell	IEP	Predict GO terms from Neighborhoods
BP	GO:0046676	negative regulation of insulin secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0046700	heterocycle catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046883	regulation of hormone secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0046888	negative regulation of hormone secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0046889	positive regulation of lipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046890	regulation of lipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0047708	biotinidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048255	mRNA stabilization	IEP	Predict GO terms from Neighborhoods
BP	GO:0048525	negative regulation of viral process	IEP	Predict GO terms from Neighborhoods
BP	GO:0050687	negative regulation of defense response to virus	IEP	Predict GO terms from Neighborhoods
BP	GO:0050709	negative regulation of protein secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0050768	negative regulation of neurogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0050774	negative regulation of dendrite morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0050790	regulation of catalytic activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0050796	regulation of insulin secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0050821	protein stabilization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051046	regulation of secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0051048	negative regulation of secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0051095	regulation of helicase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051403	stress-activated MAPK cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0051447	negative regulation of meiotic cell cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0051604	protein maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:0051644	plastid localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051961	negative regulation of nervous system development	IEP	Predict GO terms from Neighborhoods
BP	GO:0052372	modulation by symbiont of entry into host	IEP	Predict GO terms from Neighborhoods
BP	GO:0060917	regulation of (1->6)-beta-D-glucan biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0061647	histone H3-K9 modification	IEP	Predict GO terms from Neighborhoods
MF	GO:0061690	lipoamidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0062207	regulation of pattern recognition receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0065009	regulation of molecular function	IEP	Predict GO terms from Neighborhoods
BP	GO:0070092	regulation of glucagon secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0070372	regulation of ERK1 and ERK2 cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0070374	positive regulation of ERK1 and ERK2 cascade	IEP	Predict GO terms from Neighborhoods
MF	GO:0070403	NAD+ binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0070873	regulation of glycogen metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0070874	negative regulation of glycogen metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0071704	organic substance metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0071902	positive regulation of protein serine/threonine kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0072350	tricarboxylic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0080177	plastoglobule organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0080183	response to photooxidative stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0090087	regulation of peptide transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0090153	regulation of sphingolipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090276	regulation of peptide hormone secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0090278	negative regulation of peptide hormone secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0090304	nucleic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090305	nucleic acid phosphodiester bond hydrolysis	IEP	Predict GO terms from Neighborhoods
BP	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic	IEP	Predict GO terms from Neighborhoods
BP	GO:0097009	energy homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0097468	programmed cell death in response to reactive oxygen species	IEP	Predict GO terms from Neighborhoods
BP	GO:0097659	nucleic acid-templated transcription	IEP	Predict GO terms from Neighborhoods
CC	GO:0097729	9+2 motile cilium	IEP	Predict GO terms from Neighborhoods
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Predict GO terms from Neighborhoods
BP	GO:1901031	regulation of response to reactive oxygen species	IEP	Predict GO terms from Neighborhoods
BP	GO:1901259	chloroplast rRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:1901361	organic cyclic compound catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901403	positive regulation of tetrapyrrole metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901465	positive regulation of tetrapyrrole biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901562	response to paraquat	IEP	Predict GO terms from Neighborhoods
BP	GO:1902171	regulation of tocopherol cyclase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1902280	regulation of RNA helicase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1902326	positive regulation of chlorophyll biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902373	negative regulation of mRNA catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:1902494	catalytic complex	IEP	Predict GO terms from Neighborhoods
BP	GO:1903008	organelle disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:1903312	negative regulation of mRNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903530	regulation of secretion by cell	IEP	Predict GO terms from Neighborhoods
BP	GO:1903531	negative regulation of secretion by cell	IEP	Predict GO terms from Neighborhoods
BP	GO:1903901	negative regulation of viral life cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:1904143	positive regulation of carotenoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1904182	regulation of pyruvate dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1904821	chloroplast disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:1905038	regulation of membrane lipid metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:1905354	exoribonuclease complex	IEP	Predict GO terms from Neighborhoods
CC	GO:1990061	bacterial degradosome	IEP	Predict GO terms from Neighborhoods
BP	GO:1990547	mitochondrial phosphate ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:2000035	regulation of stem cell division	IEP	Predict GO terms from Neighborhoods
BP	GO:2000671	regulation of motor neuron apoptotic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000672	negative regulation of motor neuron apoptotic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000765	regulation of cytoplasmic translation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000766	negative regulation of cytoplasmic translation	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	317	468
IPR001650	Helicase_C	572	704
IPR027417	P-loop_NTPase	310	887
IPR007502	Helicase-assoc_dom	768	854
IPR011709	DEAD-box_helicase_OB_fold	923	1005
IPR014720	dsRBD_dom	1108	1170

External Links

No external refs found!

SOLTUB.AGRIA.G00000012525

Expression Profile

Co-expression Networks

Functional Annotation