SOLTUB.AGRIA.G00000014910


Description : Calreticulin


Gene families : OG_02_0014212 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000014910
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_259


Type GO Term Name Evidence Source
BP GO:0000122 negative regulation of transcription by RNA polymerase II IEA AHRD
CC GO:0001669 acrosomal vesicle IEA AHRD
BP GO:0002502 peptide antigen assembly with MHC class I protein complex IEA AHRD
BP GO:0002758 innate immune response-activating signal transduction IEA AHRD
MF GO:0003729 mRNA binding IEA AHRD
MF GO:0005178 integrin binding IEA AHRD
MF GO:0005506 iron ion binding IEA AHRD
MF GO:0005509 calcium ion binding IEA AHRD
CC GO:0005615 extracellular space IEA AHRD
CC GO:0005635 nuclear envelope IEA AHRD
CC GO:0005739 mitochondrion IEA AHRD
CC GO:0005774 vacuolar membrane IEA AHRD
CC GO:0005788 endoplasmic reticulum lumen IEA AHRD
CC GO:0005790 smooth endoplasmic reticulum IEA AHRD
CC GO:0005794 Golgi apparatus IEA AHRD
CC GO:0005829 cytosol IEA AHRD
CC GO:0005844 polysome IEA AHRD
BP GO:0006457 protein folding IEA AHRD
BP GO:0006611 protein export from nucleus IEA AHRD
BP GO:0006911 phagocytosis, engulfment IEA AHRD
BP GO:0006979 response to oxidative stress IEA AHRD
BP GO:0007283 spermatogenesis IEA AHRD
MF GO:0008270 zinc ion binding IEA AHRD
BP GO:0008284 positive regulation of cell population proliferation IEA AHRD
CC GO:0009506 plasmodesma IEA AHRD
BP GO:0009626 plant-type hypersensitive response IEA AHRD
CC GO:0009897 external side of plasma membrane IEA AHRD
BP GO:0010595 positive regulation of endothelial cell migration IEA AHRD
BP GO:0010628 positive regulation of gene expression IEA AHRD
CC GO:0016529 sarcoplasmic reticulum IEA AHRD
BP GO:0017148 negative regulation of translation IEA AHRD
MF GO:0030246 carbohydrate binding IEA AHRD
BP GO:0030433 ubiquitin-dependent ERAD pathway IEA AHRD
CC GO:0030496 midbody IEA AHRD
BP GO:0030866 cortical actin cytoskeleton organization IEA AHRD
MF GO:0031625 ubiquitin protein ligase binding IEA AHRD
BP GO:0032355 response to estradiol IEA AHRD
CC GO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane IEA AHRD
BP GO:0033144 negative regulation of intracellular steroid hormone receptor signaling pathway IEA AHRD
BP GO:0033574 response to testosterone IEA AHRD
BP GO:0034504 protein localization to nucleus IEA AHRD
BP GO:0040020 regulation of meiotic nuclear division IEA AHRD
MF GO:0042277 peptide binding IEA AHRD
MF GO:0042562 hormone binding IEA AHRD
BP GO:0042742 defense response to bacterium IEA AHRD
CC GO:0042824 MHC class I peptide loading complex IEA AHRD
BP GO:0042981 regulation of apoptotic process IEA AHRD
MF GO:0044183 protein folding chaperone IEA AHRD
CC GO:0044322 endoplasmic reticulum quality control compartment IEA AHRD
CC GO:0045335 phagocytic vesicle IEA AHRD
BP GO:0045665 negative regulation of neuron differentiation IEA AHRD
BP GO:0045787 positive regulation of cell cycle IEA AHRD
BP GO:0046283 anthocyanin-containing compound metabolic process IEA AHRD
BP GO:0046686 response to cadmium ion IEA AHRD
BP GO:0048387 negative regulation of retinoic acid receptor signaling pathway IEA AHRD
CC GO:0048471 perinuclear region of cytoplasm IEA AHRD
MF GO:0050681 nuclear androgen receptor binding IEA AHRD
BP GO:0050766 positive regulation of phagocytosis IEA AHRD
BP GO:0050821 protein stabilization IEA AHRD
MF GO:0051082 unfolded protein binding IEA AHRD
BP GO:0055007 cardiac muscle cell differentiation IEA AHRD
CC GO:0060473 cortical granule IEA AHRD
CC GO:0062023 collagen-containing extracellular matrix IEA AHRD
BP GO:0071285 cellular response to lithium ion IEA AHRD
CC GO:0071556 integral component of lumenal side of endoplasmic reticulum membrane IEA AHRD
CC GO:0071682 endocytic vesicle lumen IEA AHRD
BP GO:0090398 cellular senescence IEA AHRD
BP GO:1900026 positive regulation of substrate adhesion-dependent cell spreading IEA AHRD
BP GO:1901164 negative regulation of trophoblast cell migration IEA AHRD
BP GO:1901224 positive regulation of NIK/NF-kappaB signaling IEA AHRD
BP GO:2000510 positive regulation of dendritic cell chemotaxis IEA AHRD
Type GO Term Name Evidence Source
CC GO:0000164 protein phosphatase type 1 complex IEP Predict GO terms from Neighborhoods
BP GO:0000302 response to reactive oxygen species IEP Predict GO terms from Neighborhoods
BP GO:0000304 response to singlet oxygen IEP Predict GO terms from Neighborhoods
CC GO:0000324 fungal-type vacuole IEP Predict GO terms from Neighborhoods
BP GO:0000902 cell morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0001708 cell fate specification IEP Predict GO terms from Neighborhoods
BP GO:0001736 establishment of planar polarity IEP Predict GO terms from Neighborhoods
BP GO:0001737 establishment of imaginal disc-derived wing hair orientation IEP Predict GO terms from Neighborhoods
BP GO:0001752 compound eye photoreceptor fate commitment IEP Predict GO terms from Neighborhoods
BP GO:0002215 defense response to nematode IEP Predict GO terms from Neighborhoods
MF GO:0003988 acetyl-CoA C-acyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0003997 acyl-CoA oxidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004321 fatty-acyl-CoA synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0004383 guanylate cyclase activity IEP Predict GO terms from Neighborhoods
MF GO:0004672 protein kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004674 protein serine/threonine kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0005375 copper ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005381 iron ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005385 zinc ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0005513 detection of calcium ion IEP Predict GO terms from Neighborhoods
CC GO:0005773 vacuole IEP Predict GO terms from Neighborhoods
CC GO:0005777 peroxisome IEP Predict GO terms from Neighborhoods
CC GO:0005782 peroxisomal matrix IEP Predict GO terms from Neighborhoods
CC GO:0005886 plasma membrane IEP Predict GO terms from Neighborhoods
CC GO:0005918 septate junction IEP Predict GO terms from Neighborhoods
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006076 (1->3)-beta-D-glucan catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006468 protein phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0006743 ubiquinone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006744 ubiquinone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006793 phosphorus metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006796 phosphate-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006829 zinc ion transport IEP Predict GO terms from Neighborhoods
BP GO:0006884 cell volume homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0007031 peroxisome organization IEP Predict GO terms from Neighborhoods
BP GO:0007043 cell-cell junction assembly IEP Predict GO terms from Neighborhoods
BP GO:0007164 establishment of tissue polarity IEP Predict GO terms from Neighborhoods
BP GO:0007318 pole plasm protein localization IEP Predict GO terms from Neighborhoods
BP GO:0007391 dorsal closure IEP Predict GO terms from Neighborhoods
BP GO:0007464 R3/R4 cell fate commitment IEP Predict GO terms from Neighborhoods
BP GO:0007635 chemosensory behavior IEP Predict GO terms from Neighborhoods
MF GO:0008157 protein phosphatase 1 binding IEP Predict GO terms from Neighborhoods
BP GO:0008206 bile acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0008285 negative regulation of cell population proliferation IEP Predict GO terms from Neighborhoods
MF GO:0008410 CoA-transferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008775 acetate CoA-transferase activity IEP Predict GO terms from Neighborhoods
CC GO:0009514 glyoxysome IEP Predict GO terms from Neighborhoods
BP GO:0009620 response to fungus IEP Predict GO terms from Neighborhoods
BP GO:0009625 response to insect IEP Predict GO terms from Neighborhoods
BP GO:0009694 jasmonic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009695 jasmonic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009751 response to salicylic acid IEP Predict GO terms from Neighborhoods
MF GO:0009975 cyclase activity IEP Predict GO terms from Neighborhoods
BP GO:0009992 cellular water homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0010083 regulation of vegetative meristem growth IEP Predict GO terms from Neighborhoods
BP GO:0010111 glyoxysome organization IEP Predict GO terms from Neighborhoods
BP GO:0010124 phenylacetate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010193 response to ozone IEP Predict GO terms from Neighborhoods
BP GO:0010234 anther wall tapetum cell fate specification IEP Predict GO terms from Neighborhoods
BP GO:0010618 aerenchyma formation IEP Predict GO terms from Neighborhoods
MF GO:0015645 fatty acid ligase activity IEP Predict GO terms from Neighborhoods
BP GO:0015675 nickel cation transport IEP Predict GO terms from Neighborhoods
BP GO:0015691 cadmium ion transport IEP Predict GO terms from Neighborhoods
MF GO:0016207 4-coumarate-CoA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0016301 kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0016310 phosphorylation IEP Predict GO terms from Neighborhoods
CC GO:0016327 apicolateral plasma membrane IEP Predict GO terms from Neighborhoods
CC GO:0016328 lateral plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0016331 morphogenesis of embryonic epithelium IEP Predict GO terms from Neighborhoods
BP GO:0016334 establishment or maintenance of polarity of follicular epithelium IEP Predict GO terms from Neighborhoods
BP GO:0016336 establishment or maintenance of polarity of larval imaginal disc epithelium IEP Predict GO terms from Neighborhoods
MF GO:0016401 palmitoyl-CoA oxidase activity IEP Predict GO terms from Neighborhoods
MF GO:0016408 C-acyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predict GO terms from Neighborhoods
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016849 phosphorus-oxygen lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0018858 benzoate-CoA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0019107 myristoyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0019902 phosphatase binding IEP Predict GO terms from Neighborhoods
MF GO:0019903 protein phosphatase binding IEP Predict GO terms from Neighborhoods
BP GO:0019991 septate junction assembly IEP Predict GO terms from Neighborhoods
MF GO:0030234 enzyme regulator activity IEP Predict GO terms from Neighborhoods
BP GO:0030714 anterior/posterior axis specification, follicular epithelium IEP Predict GO terms from Neighborhoods
BP GO:0030859 polarized epithelial cell differentiation IEP Predict GO terms from Neighborhoods
CC GO:0031302 intrinsic component of endosome membrane IEP Predict GO terms from Neighborhoods
CC GO:0031303 integral component of endosome membrane IEP Predict GO terms from Neighborhoods
CC GO:0031594 neuromuscular junction IEP Predict GO terms from Neighborhoods
CC GO:0031907 microbody lumen IEP Predict GO terms from Neighborhoods
MF GO:0031956 medium-chain fatty acid-CoA ligase activity IEP Predict GO terms from Neighborhoods
BP GO:0032365 intracellular lipid transport IEP Predict GO terms from Neighborhoods
BP GO:0032366 intracellular sterol transport IEP Predict GO terms from Neighborhoods
BP GO:0033494 ferulate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033540 fatty acid beta-oxidation using acyl-CoA oxidase IEP Predict GO terms from Neighborhoods
BP GO:0034329 cell junction assembly IEP Predict GO terms from Neighborhoods
BP GO:0034332 adherens junction organization IEP Predict GO terms from Neighborhoods
BP GO:0034333 adherens junction assembly IEP Predict GO terms from Neighborhoods
BP GO:0035088 establishment or maintenance of apical/basal cell polarity IEP Predict GO terms from Neighborhoods
BP GO:0035089 establishment of apical/basal cell polarity IEP Predict GO terms from Neighborhoods
CC GO:0035580 specific granule lumen IEP Predict GO terms from Neighborhoods
BP GO:0036109 alpha-linolenic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042048 olfactory behavior IEP Predict GO terms from Neighborhoods
BP GO:0042178 xenobiotic catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042537 benzene-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042542 response to hydrogen peroxide IEP Predict GO terms from Neighborhoods
CC GO:0042579 microbody IEP Predict GO terms from Neighborhoods
BP GO:0042706 eye photoreceptor cell fate commitment IEP Predict GO terms from Neighborhoods
CC GO:0045169 fusome IEP Predict GO terms from Neighborhoods
BP GO:0045175 basal protein localization IEP Predict GO terms from Neighborhoods
BP GO:0045186 zonula adherens assembly IEP Predict GO terms from Neighborhoods
BP GO:0045197 establishment or maintenance of epithelial cell apical/basal polarity IEP Predict GO terms from Neighborhoods
BP GO:0045198 establishment of epithelial cell apical/basal polarity IEP Predict GO terms from Neighborhoods
BP GO:0045216 cell-cell junction organization IEP Predict GO terms from Neighborhoods
BP GO:0045570 regulation of imaginal disc growth IEP Predict GO terms from Neighborhoods
BP GO:0045571 negative regulation of imaginal disc growth IEP Predict GO terms from Neighborhoods
BP GO:0045851 pH reduction IEP Predict GO terms from Neighborhoods
BP GO:0045926 negative regulation of growth IEP Predict GO terms from Neighborhoods
BP GO:0046552 photoreceptor cell fate commitment IEP Predict GO terms from Neighborhoods
BP GO:0046579 positive regulation of Ras protein signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0048439 flower morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048527 lateral root development IEP Predict GO terms from Neighborhoods
BP GO:0048528 post-embryonic root development IEP Predict GO terms from Neighborhoods
BP GO:0048663 neuron fate commitment IEP Predict GO terms from Neighborhoods
BP GO:0048863 stem cell differentiation IEP Predict GO terms from Neighborhoods
MF GO:0050004 isoflavone 7-O-glucosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0050404 zeatin O-beta-D-xylosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0050563 trans-feruloyl-CoA synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0050633 acetyl-CoA C-myristoyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0050678 regulation of epithelial cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:0050680 negative regulation of epithelial cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:0050803 regulation of synapse structure or activity IEP Predict GO terms from Neighborhoods
BP GO:0050832 defense response to fungus IEP Predict GO terms from Neighborhoods
BP GO:0051057 positive regulation of small GTPase mediated signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0051275 beta-glucan catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0060581 cell fate commitment involved in pattern specification IEP Predict GO terms from Neighborhoods
BP GO:0060866 leaf abscission IEP Predict GO terms from Neighborhoods
BP GO:0061162 establishment of monopolar cell polarity IEP Predict GO terms from Neighborhoods
BP GO:0061245 establishment or maintenance of bipolar cell polarity IEP Predict GO terms from Neighborhoods
BP GO:0061326 renal tubule development IEP Predict GO terms from Neighborhoods
BP GO:0061339 establishment or maintenance of monopolar cell polarity IEP Predict GO terms from Neighborhoods
CC GO:0070160 tight junction IEP Predict GO terms from Neighborhoods
BP GO:0071577 zinc ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0072002 Malpighian tubule development IEP Predict GO terms from Neighborhoods
BP GO:0072089 stem cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:0090162 establishment of epithelial cell polarity IEP Predict GO terms from Neighborhoods
BP GO:0090696 post-embryonic plant organ development IEP Predict GO terms from Neighborhoods
BP GO:0097120 receptor localization to synapse IEP Predict GO terms from Neighborhoods
MF GO:0102391 decanoate-CoA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0106286 (E)-caffeate-CoA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0106290 trans-cinnamate-CoA ligase activity IEP Predict GO terms from Neighborhoods
BP GO:0120192 tight junction assembly IEP Predict GO terms from Neighborhoods
BP GO:0120193 tight junction organization IEP Predict GO terms from Neighborhoods
BP GO:0120254 olefinic compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901661 quinone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901663 quinone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902458 positive regulation of stomatal opening IEP Predict GO terms from Neighborhoods
CC GO:1990794 basolateral part of cell IEP Predict GO terms from Neighborhoods
BP GO:2000022 regulation of jasmonic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR009033 Calreticulin/calnexin_P_dom_sf 200 315
IPR001580 Calret/calnex 259 332
IPR001580 Calret/calnex 22 257
IPR013320 ConA-like_dom_sf 15 216
No external refs found!