SOLTUB.AGRIA.G00000015534


Description : Peroxisome biogenesis protein 1


Gene families : OG_02_0005938 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000015534
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_173


Type GO Term Name Evidence Source
CC GO:0005694 chromosome IEA AHRD
CC GO:0005778 peroxisomal membrane IEA AHRD
CC GO:0005789 endoplasmic reticulum membrane IEA AHRD
CC GO:0005829 cytosol IEA AHRD
CC GO:0005856 cytoskeleton IEA AHRD
BP GO:0006281 DNA repair IEA AHRD
BP GO:0006635 fatty acid beta-oxidation IEA AHRD
BP GO:0007275 multicellular organism development IEA AHRD
MF GO:0008022 protein C-terminus binding IEA AHRD
BP GO:0010952 positive regulation of peptidase activity IEA AHRD
BP GO:0016558 protein import into peroxisome matrix IEA AHRD
MF GO:0016887 ATP hydrolysis activity IEA AHRD
MF GO:0019899 enzyme binding IEA AHRD
MF GO:0031593 polyubiquitin modification-dependent protein binding IEA AHRD
CC GO:0031981 nuclear lumen IEA AHRD
BP GO:0032434 regulation of proteasomal ubiquitin-dependent protein catabolic process IEA AHRD
MF GO:0032559 adenyl ribonucleotide binding IEA AHRD
BP GO:0036503 ERAD pathway IEA AHRD
BP GO:0042254 ribosome biogenesis IEA AHRD
MF GO:0043168 anion binding IEA AHRD
MF GO:0044877 protein-containing complex binding IEA AHRD
CC GO:0045202 synapse IEA AHRD
BP GO:0065008 regulation of biological quality IEA AHRD
CC GO:0098796 membrane protein complex IEA AHRD
CC GO:0140534 endoplasmic reticulum protein-containing complex IEA AHRD
CC GO:1902494 catalytic complex IEA AHRD
Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP Predict GO terms from Neighborhoods
BP GO:0000354 cis assembly of pre-catalytic spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0000388 spliceosome conformational change to release U4 (or U4atac) and U1 (or U11) IEP Predict GO terms from Neighborhoods
CC GO:0000502 proteasome complex IEP Predict GO terms from Neighborhoods
BP GO:0001731 formation of translation preinitiation complex IEP Predict GO terms from Neighborhoods
BP GO:0001819 positive regulation of cytokine production IEP Predict GO terms from Neighborhoods
BP GO:0002028 regulation of sodium ion transport IEP Predict GO terms from Neighborhoods
BP GO:0002090 regulation of receptor internalization IEP Predict GO terms from Neighborhoods
BP GO:0002092 positive regulation of receptor internalization IEP Predict GO terms from Neighborhoods
BP GO:0003264 regulation of cardioblast proliferation IEP Predict GO terms from Neighborhoods
MF GO:0003678 DNA helicase activity IEP Predict GO terms from Neighborhoods
MF GO:0003724 RNA helicase activity IEP Predict GO terms from Neighborhoods
MF GO:0003730 mRNA 3'-UTR binding IEP Predict GO terms from Neighborhoods
MF GO:0004386 helicase activity IEP Predict GO terms from Neighborhoods
MF GO:0004709 MAP kinase kinase kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004722 protein serine/threonine phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0005112 Notch binding IEP Predict GO terms from Neighborhoods
CC GO:0005681 spliceosomal complex IEP Predict GO terms from Neighborhoods
CC GO:0005682 U5 snRNP IEP Predict GO terms from Neighborhoods
CC GO:0005768 endosome IEP Predict GO terms from Neighborhoods
CC GO:0005769 early endosome IEP Predict GO terms from Neighborhoods
CC GO:0005776 autophagosome IEP Predict GO terms from Neighborhoods
BP GO:0006304 DNA modification IEP Predict GO terms from Neighborhoods
BP GO:0006307 DNA dealkylation involved in DNA repair IEP Predict GO terms from Neighborhoods
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0006414 translational elongation IEP Predict GO terms from Neighborhoods
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006623 protein targeting to vacuole IEP Predict GO terms from Neighborhoods
BP GO:0006885 regulation of pH IEP Predict GO terms from Neighborhoods
BP GO:0006909 phagocytosis IEP Predict GO terms from Neighborhoods
BP GO:0007041 lysosomal transport IEP Predict GO terms from Neighborhoods
BP GO:0007528 neuromuscular junction development IEP Predict GO terms from Neighborhoods
BP GO:0008037 cell recognition IEP Predict GO terms from Neighborhoods
BP GO:0008038 neuron recognition IEP Predict GO terms from Neighborhoods
MF GO:0008094 ATP-dependent activity, acting on DNA IEP Predict GO terms from Neighborhoods
MF GO:0008186 ATP-dependent activity, acting on RNA IEP Predict GO terms from Neighborhoods
BP GO:0008333 endosome to lysosome transport IEP Predict GO terms from Neighborhoods
MF GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0008494 translation activator activity IEP Predict GO terms from Neighborhoods
BP GO:0008586 imaginal disc-derived wing vein morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0008589 regulation of smoothened signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0008593 regulation of Notch signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009686 gibberellin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009750 response to fructose IEP Predict GO terms from Neighborhoods
BP GO:0009886 post-embryonic animal morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010256 endomembrane system organization IEP Predict GO terms from Neighborhoods
BP GO:0010638 positive regulation of organelle organization IEP Predict GO terms from Neighborhoods
BP GO:0010766 negative regulation of sodium ion transport IEP Predict GO terms from Neighborhoods
BP GO:0010958 regulation of amino acid import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0010994 free ubiquitin chain polymerization IEP Predict GO terms from Neighborhoods
CC GO:0012505 endomembrane system IEP Predict GO terms from Neighborhoods
CC GO:0012506 vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0012510 trans-Golgi network transport vesicle membrane IEP Predict GO terms from Neighborhoods
BP GO:0016192 vesicle-mediated transport IEP Predict GO terms from Neighborhoods
BP GO:0016198 axon choice point recognition IEP Predict GO terms from Neighborhoods
BP GO:0016199 axon midline choice point recognition IEP Predict GO terms from Neighborhoods
CC GO:0016282 eukaryotic 43S preinitiation complex IEP Predict GO terms from Neighborhoods
MF GO:0017022 myosin binding IEP Predict GO terms from Neighborhoods
BP GO:0018108 peptidyl-tyrosine phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0018212 peptidyl-tyrosine modification IEP Predict GO terms from Neighborhoods
BP GO:0019941 modification-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0022008 neurogenesis IEP Predict GO terms from Neighborhoods
BP GO:0022618 ribonucleoprotein complex assembly IEP Predict GO terms from Neighborhoods
CC GO:0022627 cytosolic small ribosomal subunit IEP Predict GO terms from Neighborhoods
BP GO:0030099 myeloid cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0030154 cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0030220 platelet formation IEP Predict GO terms from Neighborhoods
BP GO:0030433 ubiquitin-dependent ERAD pathway IEP Predict GO terms from Neighborhoods
BP GO:0030435 sporulation resulting in formation of a cellular spore IEP Predict GO terms from Neighborhoods
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
BP GO:0030641 regulation of cellular pH IEP Predict GO terms from Neighborhoods
CC GO:0030658 transport vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030659 cytoplasmic vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030660 Golgi-associated vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030662 coated vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030665 clathrin-coated vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030897 HOPS complex IEP Predict GO terms from Neighborhoods
BP GO:0031324 negative regulation of cellular metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0031410 cytoplasmic vesicle IEP Predict GO terms from Neighborhoods
CC GO:0031982 vesicle IEP Predict GO terms from Neighborhoods
BP GO:0032392 DNA geometric change IEP Predict GO terms from Neighborhoods
BP GO:0032508 DNA duplex unwinding IEP Predict GO terms from Neighborhoods
BP GO:0032890 regulation of organic acid transport IEP Predict GO terms from Neighborhoods
BP GO:0032891 negative regulation of organic acid transport IEP Predict GO terms from Neighborhoods
BP GO:0033043 regulation of organelle organization IEP Predict GO terms from Neighborhoods
BP GO:0033044 regulation of chromosome organization IEP Predict GO terms from Neighborhoods
BP GO:0033045 regulation of sister chromatid segregation IEP Predict GO terms from Neighborhoods
BP GO:0033059 cellular pigmentation IEP Predict GO terms from Neighborhoods
CC GO:0033263 CORVET complex IEP Predict GO terms from Neighborhoods
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Predict GO terms from Neighborhoods
BP GO:0034763 negative regulation of transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0035510 DNA dealkylation IEP Predict GO terms from Neighborhoods
BP GO:0036289 peptidyl-serine autophosphorylation IEP Predict GO terms from Neighborhoods
CC GO:0036477 somatodendritic compartment IEP Predict GO terms from Neighborhoods
BP GO:0042255 ribosome assembly IEP Predict GO terms from Neighborhoods
MF GO:0043024 ribosomal small subunit binding IEP Predict GO terms from Neighborhoods
MF GO:0043138 3'-5' DNA helicase activity IEP Predict GO terms from Neighborhoods
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043271 negative regulation of ion transport IEP Predict GO terms from Neighborhoods
BP GO:0043330 response to exogenous dsRNA IEP Predict GO terms from Neighborhoods
BP GO:0043331 response to dsRNA IEP Predict GO terms from Neighborhoods
BP GO:0043473 pigmentation IEP Predict GO terms from Neighborhoods
BP GO:0043489 RNA stabilization IEP Predict GO terms from Neighborhoods
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043933 protein-containing complex organization IEP Predict GO terms from Neighborhoods
BP GO:0044806 G-quadruplex DNA unwinding IEP Predict GO terms from Neighborhoods
MF GO:0045309 protein phosphorylated amino acid binding IEP Predict GO terms from Neighborhoods
BP GO:0045595 regulation of cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045746 negative regulation of Notch signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0045807 positive regulation of endocytosis IEP Predict GO terms from Neighborhoods
BP GO:0045879 negative regulation of smoothened signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predict GO terms from Neighborhoods
BP GO:0046822 regulation of nucleocytoplasmic transport IEP Predict GO terms from Neighborhoods
BP GO:0048066 developmental pigmentation IEP Predict GO terms from Neighborhoods
BP GO:0048069 eye pigmentation IEP Predict GO terms from Neighborhoods
BP GO:0048070 regulation of developmental pigmentation IEP Predict GO terms from Neighborhoods
BP GO:0048259 regulation of receptor-mediated endocytosis IEP Predict GO terms from Neighborhoods
BP GO:0048260 positive regulation of receptor-mediated endocytosis IEP Predict GO terms from Neighborhoods
BP GO:0048522 positive regulation of cellular process IEP Predict GO terms from Neighborhoods
BP GO:0048524 positive regulation of viral process IEP Predict GO terms from Neighborhoods
BP GO:0048699 generation of neurons IEP Predict GO terms from Neighborhoods
BP GO:0050792 regulation of viral process IEP Predict GO terms from Neighborhoods
BP GO:0050807 regulation of synapse organization IEP Predict GO terms from Neighborhoods
BP GO:0050808 synapse organization IEP Predict GO terms from Neighborhoods
BP GO:0050982 detection of mechanical stimulus IEP Predict GO terms from Neighborhoods
BP GO:0051130 positive regulation of cellular component organization IEP Predict GO terms from Neighborhoods
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0051219 phosphoprotein binding IEP Predict GO terms from Neighborhoods
BP GO:0051253 negative regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051258 protein polymerization IEP Predict GO terms from Neighborhoods
BP GO:0051276 chromosome organization IEP Predict GO terms from Neighborhoods
BP GO:0051445 regulation of meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0051446 positive regulation of meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0051453 regulation of intracellular pH IEP Predict GO terms from Neighborhoods
BP GO:0051495 positive regulation of cytoskeleton organization IEP Predict GO terms from Neighborhoods
BP GO:0051648 vesicle localization IEP Predict GO terms from Neighborhoods
MF GO:0051880 G-quadruplex DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0051952 regulation of amine transport IEP Predict GO terms from Neighborhoods
BP GO:0051953 negative regulation of amine transport IEP Predict GO terms from Neighborhoods
BP GO:0051955 regulation of amino acid transport IEP Predict GO terms from Neighborhoods
BP GO:0051956 negative regulation of amino acid transport IEP Predict GO terms from Neighborhoods
BP GO:0051962 positive regulation of nervous system development IEP Predict GO terms from Neighborhoods
BP GO:0051963 regulation of synapse assembly IEP Predict GO terms from Neighborhoods
BP GO:0051965 positive regulation of synapse assembly IEP Predict GO terms from Neighborhoods
BP GO:0051983 regulation of chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:0060341 regulation of cellular localization IEP Predict GO terms from Neighborhoods
BP GO:0061025 membrane fusion IEP Predict GO terms from Neighborhoods
BP GO:0065003 protein-containing complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain IEP Predict GO terms from Neighborhoods
CC GO:0070993 translation preinitiation complex IEP Predict GO terms from Neighborhoods
CC GO:0071005 U2-type precatalytic spliceosome IEP Predict GO terms from Neighborhoods
CC GO:0071006 U2-type catalytic step 1 spliceosome IEP Predict GO terms from Neighborhoods
CC GO:0071011 precatalytic spliceosome IEP Predict GO terms from Neighborhoods
CC GO:0071012 catalytic step 1 spliceosome IEP Predict GO terms from Neighborhoods
CC GO:0071013 catalytic step 2 spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0071103 DNA conformation change IEP Predict GO terms from Neighborhoods
CC GO:0071212 subsynaptic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predict GO terms from Neighborhoods
BP GO:0072344 rescue of stalled ribosome IEP Predict GO terms from Neighborhoods
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
CC GO:0097525 spliceosomal snRNP complex IEP Predict GO terms from Neighborhoods
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predict GO terms from Neighborhoods
BP GO:0097576 vacuole fusion IEP Predict GO terms from Neighborhoods
CC GO:0097708 intracellular vesicle IEP Predict GO terms from Neighborhoods
CC GO:0098794 postsynapse IEP Predict GO terms from Neighborhoods
CC GO:0099023 vesicle tethering complex IEP Predict GO terms from Neighborhoods
CC GO:0099503 secretory vesicle IEP Predict GO terms from Neighborhoods
BP GO:0110020 regulation of actomyosin structure organization IEP Predict GO terms from Neighborhoods
CC GO:0120114 Sm-like protein family complex IEP Predict GO terms from Neighborhoods
BP GO:0120305 regulation of pigmentation IEP Predict GO terms from Neighborhoods
MF GO:0140097 catalytic activity, acting on DNA IEP Predict GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Predict GO terms from Neighborhoods
CC GO:0140535 intracellular protein-containing complex IEP Predict GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Predict GO terms from Neighborhoods
MF GO:0140657 ATP-dependent activity IEP Predict GO terms from Neighborhoods
BP GO:1901888 regulation of cell junction assembly IEP Predict GO terms from Neighborhoods
BP GO:1901890 positive regulation of cell junction assembly IEP Predict GO terms from Neighborhoods
BP GO:1901993 regulation of meiotic cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1901995 positive regulation of meiotic cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1902101 positive regulation of metaphase/anaphase transition of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1902102 regulation of metaphase/anaphase transition of meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1902104 positive regulation of metaphase/anaphase transition of meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1902115 regulation of organelle assembly IEP Predict GO terms from Neighborhoods
BP GO:1902117 positive regulation of organelle assembly IEP Predict GO terms from Neighborhoods
BP GO:1902369 negative regulation of RNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902905 positive regulation of supramolecular fiber organization IEP Predict GO terms from Neighborhoods
BP GO:1903076 regulation of protein localization to plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:1903077 negative regulation of protein localization to plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:1903789 regulation of amino acid transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1904375 regulation of protein localization to cell periphery IEP Predict GO terms from Neighborhoods
BP GO:1904376 negative regulation of protein localization to cell periphery IEP Predict GO terms from Neighborhoods
BP GO:1905062 positive regulation of cardioblast proliferation IEP Predict GO terms from Neighborhoods
BP GO:1905132 regulation of meiotic chromosome separation IEP Predict GO terms from Neighborhoods
BP GO:1905134 positive regulation of meiotic chromosome separation IEP Predict GO terms from Neighborhoods
BP GO:1905189 regulation of metaphase/anaphase transition of meiosis II IEP Predict GO terms from Neighborhoods
BP GO:1905304 regulation of cardiac myofibril assembly IEP Predict GO terms from Neighborhoods
BP GO:1905306 positive regulation of cardiac myofibril assembly IEP Predict GO terms from Neighborhoods
CC GO:1905368 peptidase complex IEP Predict GO terms from Neighborhoods
CC GO:1905369 endopeptidase complex IEP Predict GO terms from Neighborhoods
BP GO:1905475 regulation of protein localization to membrane IEP Predict GO terms from Neighborhoods
BP GO:1905476 negative regulation of protein localization to membrane IEP Predict GO terms from Neighborhoods
BP GO:1905529 regulation of uracil import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:1905530 negative regulation of uracil import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:1905532 regulation of leucine import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:1905533 negative regulation of leucine import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:1905818 regulation of chromosome separation IEP Predict GO terms from Neighborhoods
BP GO:1905820 positive regulation of chromosome separation IEP Predict GO terms from Neighborhoods
BP GO:1990116 ribosome-associated ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
CC GO:1990904 ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
BP GO:2000026 regulation of multicellular organismal development IEP Predict GO terms from Neighborhoods
BP GO:2000035 regulation of stem cell division IEP Predict GO terms from Neighborhoods
BP GO:2000136 regulation of cell proliferation involved in heart morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:2000138 positive regulation of cell proliferation involved in heart morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:2001252 positive regulation of chromosome organization IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR029067 CDC48_domain_2-like_sf 94 172
IPR027417 P-loop_NTPase 837 1095
IPR041569 AAA_lid_3 1027 1063
IPR015342 PEX-N_psi_beta-barrel 98 172
IPR003959 ATPase_AAA_core 587 732
IPR003959 ATPase_AAA_core 875 1002
IPR009010 Asp_de-COase-like_dom_sf 9 91
IPR027417 P-loop_NTPase 560 820
No external refs found!