SOLTUB.AGRIA.G00000016089


Description : Homeobox-leucine zipper protein family


Gene families : OG_02_0014329 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000016089
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_128


Type GO Term Name Evidence Source
MF GO:0000976 transcription cis-regulatory region binding IEA AHRD
MF GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IEA AHRD
CC GO:0005634 nucleus IEA AHRD
BP GO:0006357 regulation of transcription by RNA polymerase II IEA AHRD
BP GO:0009414 response to water deprivation IEA AHRD
BP GO:0009637 response to blue light IEA AHRD
BP GO:0009651 response to salt stress IEA AHRD
BP GO:0009733 response to auxin IEA AHRD
BP GO:0009739 response to gibberellin IEA AHRD
BP GO:0009744 response to sucrose IEA AHRD
BP GO:0009788 negative regulation of abscisic acid-activated signaling pathway IEA AHRD
BP GO:0010311 lateral root formation IEA AHRD
BP GO:0017148 negative regulation of translation IEA AHRD
BP GO:0030308 negative regulation of cell growth IEA AHRD
MF GO:0042803 protein homodimerization activity IEA AHRD
BP GO:0045893 positive regulation of DNA-templated transcription IEA AHRD
BP GO:0048510 regulation of timing of transition from vegetative to reproductive phase IEA AHRD
BP GO:0048573 photoperiodism, flowering IEA AHRD
BP GO:0048826 cotyledon morphogenesis IEA AHRD
BP GO:0080022 primary root development IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000018 regulation of DNA recombination IEP Predict GO terms from Neighborhoods
BP GO:0001708 cell fate specification IEP Predict GO terms from Neighborhoods
CC GO:0002178 palmitoyltransferase complex IEP Predict GO terms from Neighborhoods
BP GO:0003002 regionalization IEP Predict GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003725 double-stranded RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0004521 endoribonuclease activity IEP Predict GO terms from Neighborhoods
CC GO:0005731 nucleolus organizer region IEP Predict GO terms from Neighborhoods
CC GO:0005798 Golgi-associated vesicle IEP Predict GO terms from Neighborhoods
CC GO:0005856 cytoskeleton IEP Predict GO terms from Neighborhoods
BP GO:0006259 DNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006304 DNA modification IEP Predict GO terms from Neighborhoods
BP GO:0006305 DNA alkylation IEP Predict GO terms from Neighborhoods
BP GO:0006306 DNA methylation IEP Predict GO terms from Neighborhoods
BP GO:0006346 DNA methylation-dependent heterochromatin formation IEP Predict GO terms from Neighborhoods
BP GO:0006482 protein demethylation IEP Predict GO terms from Neighborhoods
BP GO:0006497 protein lipidation IEP Predict GO terms from Neighborhoods
BP GO:0006612 protein targeting to membrane IEP Predict GO terms from Neighborhoods
BP GO:0007140 male meiotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0007143 female meiotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0007389 pattern specification process IEP Predict GO terms from Neighborhoods
BP GO:0008214 protein dealkylation IEP Predict GO terms from Neighborhoods
BP GO:0009561 megagametogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009616 RNAi-mediated antiviral immune response IEP Predict GO terms from Neighborhoods
BP GO:0009736 cytokinin-activated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009901 anther dehiscence IEP Predict GO terms from Neighborhoods
BP GO:0009934 regulation of meristem structural organization IEP Predict GO terms from Neighborhoods
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP Predict GO terms from Neighborhoods
BP GO:0009956 radial pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010017 red or far-red light signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010022 meristem determinacy IEP Predict GO terms from Neighborhoods
BP GO:0010050 vegetative phase change IEP Predict GO terms from Neighborhoods
BP GO:0010051 xylem and phloem pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010093 specification of floral organ identity IEP Predict GO terms from Neighborhoods
BP GO:0010094 specification of carpel identity IEP Predict GO terms from Neighborhoods
BP GO:0010158 abaxial cell fate specification IEP Predict GO terms from Neighborhoods
BP GO:0010229 inflorescence development IEP Predict GO terms from Neighborhoods
BP GO:0010267 ta-siRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0010492 maintenance of shoot apical meristem identity IEP Predict GO terms from Neighborhoods
BP GO:0010496 intercellular transport IEP Predict GO terms from Neighborhoods
BP GO:0010497 plasmodesmata-mediated intercellular transport IEP Predict GO terms from Neighborhoods
BP GO:0010559 regulation of glycoprotein biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010561 negative regulation of glycoprotein biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010569 regulation of double-strand break repair via homologous recombination IEP Predict GO terms from Neighborhoods
BP GO:0010582 floral meristem determinacy IEP Predict GO terms from Neighborhoods
BP GO:0010586 miRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010599 lsiRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0010628 positive regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010930 negative regulation of auxin mediated signaling pathway IEP Predict GO terms from Neighborhoods
CC GO:0015630 microtubule cytoskeleton IEP Predict GO terms from Neighborhoods
MF GO:0016409 palmitoyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016417 S-acyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0016441 post-transcriptional gene silencing IEP Predict GO terms from Neighborhoods
CC GO:0016442 RISC complex IEP Predict GO terms from Neighborhoods
BP GO:0016577 histone demethylation IEP Predict GO terms from Neighborhoods
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predict GO terms from Neighborhoods
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predict GO terms from Neighborhoods
BP GO:0018198 peptidyl-cysteine modification IEP Predict GO terms from Neighborhoods
BP GO:0018230 peptidyl-L-cysteine S-palmitoylation IEP Predict GO terms from Neighborhoods
BP GO:0018231 peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine IEP Predict GO terms from Neighborhoods
BP GO:0018345 protein palmitoylation IEP Predict GO terms from Neighborhoods
MF GO:0019706 protein-cysteine S-palmitoyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0019707 protein-cysteine S-acyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0019827 stem cell population maintenance IEP Predict GO terms from Neighborhoods
CC GO:0030136 clathrin-coated vesicle IEP Predict GO terms from Neighborhoods
CC GO:0030140 trans-Golgi network transport vesicle IEP Predict GO terms from Neighborhoods
BP GO:0030422 siRNA processing IEP Predict GO terms from Neighborhoods
CC GO:0030863 cortical cytoskeleton IEP Predict GO terms from Neighborhoods
CC GO:0030874 nucleolar chromatin IEP Predict GO terms from Neighborhoods
BP GO:0031047 gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:0031048 small non-coding RNA-dependent heterochromatin formation IEP Predict GO terms from Neighborhoods
BP GO:0031054 pre-miRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0031057 negative regulation of histone modification IEP Predict GO terms from Neighborhoods
BP GO:0031062 positive regulation of histone methylation IEP Predict GO terms from Neighborhoods
CC GO:0031228 intrinsic component of Golgi membrane IEP Predict GO terms from Neighborhoods
CC GO:0031332 RNAi effector complex IEP Predict GO terms from Neighborhoods
BP GO:0031507 heterochromatin formation IEP Predict GO terms from Neighborhoods
BP GO:0033169 histone H3-K9 demethylation IEP Predict GO terms from Neighborhoods
BP GO:0035019 somatic stem cell population maintenance IEP Predict GO terms from Neighborhoods
BP GO:0035065 regulation of histone acetylation IEP Predict GO terms from Neighborhoods
BP GO:0035067 negative regulation of histone acetylation IEP Predict GO terms from Neighborhoods
BP GO:0035194 post-transcriptional gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:0035195 miRNA-mediated gene silencing IEP Predict GO terms from Neighborhoods
BP GO:0035196 miRNA processing IEP Predict GO terms from Neighborhoods
MF GO:0035198 miRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0035279 miRNA-mediated gene silencing by mRNA destabilization IEP Predict GO terms from Neighborhoods
CC GO:0035618 root hair IEP Predict GO terms from Neighborhoods
BP GO:0042445 hormone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042984 regulation of amyloid precursor protein biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042985 negative regulation of amyloid precursor protein biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0043621 protein self-association IEP Predict GO terms from Neighborhoods
BP GO:0043622 cortical microtubule organization IEP Predict GO terms from Neighborhoods
MF GO:0043849 Ras palmitoyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0044728 DNA methylation or demethylation IEP Predict GO terms from Neighborhoods
BP GO:0045814 negative regulation of gene expression, epigenetic IEP Predict GO terms from Neighborhoods
BP GO:0045892 negative regulation of DNA-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0048438 floral whorl development IEP Predict GO terms from Neighborhoods
BP GO:0048467 gynoecium development IEP Predict GO terms from Neighborhoods
BP GO:0048830 adventitious root development IEP Predict GO terms from Neighborhoods
BP GO:0050779 RNA destabilization IEP Predict GO terms from Neighborhoods
BP GO:0051253 negative regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051570 regulation of histone H3-K9 methylation IEP Predict GO terms from Neighborhoods
BP GO:0051574 positive regulation of histone H3-K9 methylation IEP Predict GO terms from Neighborhoods
BP GO:0055046 microgametogenesis IEP Predict GO terms from Neighborhoods
BP GO:0055063 sulfate ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening IEP Predict GO terms from Neighborhoods
BP GO:0060213 positive regulation of nuclear-transcribed mRNA poly(A) tail shortening IEP Predict GO terms from Neighborhoods
BP GO:0061014 positive regulation of mRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0061157 mRNA destabilization IEP Predict GO terms from Neighborhoods
BP GO:0061866 obsolete negative regulation of histone H3-S10 phosphorylation IEP Predict GO terms from Neighborhoods
MF GO:0061980 regulatory RNA binding IEP Predict GO terms from Neighborhoods
BP GO:0070076 histone lysine demethylation IEP Predict GO terms from Neighborhoods
MF GO:0070551 endoribonuclease activity, cleaving siRNA-paired mRNA IEP Predict GO terms from Neighborhoods
CC GO:0070578 RISC-loading complex IEP Predict GO terms from Neighborhoods
BP GO:0070828 heterochromatin organization IEP Predict GO terms from Neighborhoods
BP GO:0070988 demethylation IEP Predict GO terms from Neighborhoods
BP GO:0071214 cellular response to abiotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071478 cellular response to radiation IEP Predict GO terms from Neighborhoods
BP GO:0071482 cellular response to light stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071484 cellular response to light intensity IEP Predict GO terms from Neighborhoods
BP GO:0071486 cellular response to high light intensity IEP Predict GO terms from Neighborhoods
BP GO:0071489 cellular response to red or far red light IEP Predict GO terms from Neighborhoods
BP GO:0072505 divalent inorganic anion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0080060 integument development IEP Predict GO terms from Neighborhoods
BP GO:0080127 fruit septum development IEP Predict GO terms from Neighborhoods
BP GO:0080188 gene silencing by RNA-directed DNA methylation IEP Predict GO terms from Neighborhoods
BP GO:0080190 lateral growth IEP Predict GO terms from Neighborhoods
BP GO:0080191 secondary thickening IEP Predict GO terms from Neighborhoods
MF GO:0090624 endoribonuclease activity, cleaving miRNA-paired mRNA IEP Predict GO terms from Neighborhoods
BP GO:0090625 siRNA-mediated gene silencing by mRNA destabilization IEP Predict GO terms from Neighborhoods
BP GO:0090701 specification of plant organ identity IEP Predict GO terms from Neighborhoods
BP GO:0098727 maintenance of cell number IEP Predict GO terms from Neighborhoods
BP GO:0104004 cellular response to environmental stimulus IEP Predict GO terms from Neighborhoods
BP GO:0140013 meiotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0140718 facultative heterochromatin formation IEP Predict GO terms from Neighborhoods
BP GO:0140766 siRNA-mediated gene silencing IEP Predict GO terms from Neighborhoods
BP GO:1900109 regulation of histone H3-K9 dimethylation IEP Predict GO terms from Neighborhoods
BP GO:1900111 positive regulation of histone H3-K9 dimethylation IEP Predict GO terms from Neighborhoods
BP GO:1900151 regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay IEP Predict GO terms from Neighborhoods
BP GO:1900153 positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay IEP Predict GO terms from Neighborhoods
BP GO:1901983 regulation of protein acetylation IEP Predict GO terms from Neighborhoods
BP GO:1901984 negative regulation of protein acetylation IEP Predict GO terms from Neighborhoods
BP GO:1902183 regulation of shoot apical meristem development IEP Predict GO terms from Neighborhoods
CC GO:1902555 endoribonuclease complex IEP Predict GO terms from Neighborhoods
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903018 regulation of glycoprotein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903019 negative regulation of glycoprotein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903341 regulation of meiotic DNA double-strand break formation IEP Predict GO terms from Neighborhoods
BP GO:1903343 positive regulation of meiotic DNA double-strand break formation IEP Predict GO terms from Neighborhoods
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:1905328 plant septum development IEP Predict GO terms from Neighborhoods
CC GO:1905348 endonuclease complex IEP Predict GO terms from Neighborhoods
BP GO:2000615 regulation of histone H3-K9 acetylation IEP Predict GO terms from Neighborhoods
BP GO:2000616 negative regulation of histone H3-K9 acetylation IEP Predict GO terms from Neighborhoods
BP GO:2000756 regulation of peptidyl-lysine acetylation IEP Predict GO terms from Neighborhoods
BP GO:2000757 negative regulation of peptidyl-lysine acetylation IEP Predict GO terms from Neighborhoods
BP GO:2000779 regulation of double-strand break repair IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003106 Leu_zip_homeo 108 149
IPR001356 Homeobox_dom 54 106
IPR009057 Homeobox-like_sf 49 110
No external refs found!