SOLTUB.AGRIA.G00000001774

Description : Protease m50 membrane-bound transcription factor site 2 protease, putative

Gene families : OG_02_0005315 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000001774
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_206

Type	GO Term	Name	Evidence	Source
CC	GO:0000139	Golgi membrane	IEA	AHRD
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004222	metalloendopeptidase activity	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	AHRD
BP	GO:0006508	proteolysis	IEA	AHRD
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0006972	hyperosmotic response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008237	metallopeptidase activity	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010646	regulation of cell communication	None	Extended
CC	GO:0016020	membrane	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042538	hyperosmotic salinity response	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0062197	cellular response to chemical stress	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071214	cellular response to abiotic stimulus	None	Extended
BP	GO:0071470	cellular response to osmotic stress	None	Extended
BP	GO:0071472	cellular response to salt stress	None	Extended
BP	GO:0071474	cellular hyperosmotic response	None	Extended
BP	GO:0071475	cellular hyperosmotic salinity response	IEA	AHRD
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0080135	regulation of cellular response to stress	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
BP	GO:0104004	cellular response to environmental stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1900457	regulation of brassinosteroid mediated signaling pathway	IEA	AHRD
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1905897	regulation of response to endoplasmic reticulum stress	IEA	AHRD
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000012	single strand break repair	IEP	Predict GO terms from Neighborhoods
MF	GO:0000049	tRNA binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0000118	histone deacetylase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0000123	histone acetyltransferase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0000151	ubiquitin ligase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0000152	nuclear ubiquitin ligase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0000323	lytic vacuole	IEP	Predict GO terms from Neighborhoods
BP	GO:0000380	alternative mRNA splicing, via spliceosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0000421	autophagosome membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0000578	embryonic axis specification	IEP	Predict GO terms from Neighborhoods
CC	GO:0000775	chromosome, centromeric region	IEP	Predict GO terms from Neighborhoods
BP	GO:0002943	tRNA dihydrouridine synthesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0003725	double-stranded RNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003909	DNA ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0003910	DNA ligase (ATP) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004521	endoribonuclease activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004525	ribonuclease III activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005381	iron ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005488	binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0005515	protein binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005680	anaphase-promoting complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0005764	lysosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment	IEP	Predict GO terms from Neighborhoods
CC	GO:0005801	cis-Golgi network	IEP	Predict GO terms from Neighborhoods
CC	GO:0005848	mRNA cleavage stimulating factor complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0005849	mRNA cleavage factor complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0006266	DNA ligation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006284	base-excision repair	IEP	Predict GO terms from Neighborhoods
BP	GO:0006289	nucleotide-excision repair	IEP	Predict GO terms from Neighborhoods
BP	GO:0006303	double-strand break repair via nonhomologous end joining	IEP	Predict GO terms from Neighborhoods
BP	GO:0006396	RNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0006414	translational elongation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006458	'de novo' protein folding	IEP	Predict GO terms from Neighborhoods
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006842	tricarboxylic acid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006879	cellular iron ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	IEP	Predict GO terms from Neighborhoods
BP	GO:0006914	autophagy	IEP	Predict GO terms from Neighborhoods
BP	GO:0006954	inflammatory response	IEP	Predict GO terms from Neighborhoods
BP	GO:0006986	response to unfolded protein	IEP	Predict GO terms from Neighborhoods
BP	GO:0007019	microtubule depolymerization	IEP	Predict GO terms from Neighborhoods
CC	GO:0008352	katanin complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0008406	gonad development	IEP	Predict GO terms from Neighborhoods
BP	GO:0009057	macromolecule catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009616	RNAi-mediated antiviral immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0009638	phototropism	IEP	Predict GO terms from Neighborhoods
BP	GO:0009785	blue light signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009877	nodulation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009880	embryonic pattern specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0009896	positive regulation of catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009942	longitudinal axis specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0010044	response to aluminum ion	IEP	Predict GO terms from Neighborhoods
MF	GO:0010181	FMN binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0010225	response to UV-C	IEP	Predict GO terms from Neighborhoods
BP	GO:0010228	vegetative to reproductive phase transition of meristem	IEP	Predict GO terms from Neighborhoods
BP	GO:0010267	ta-siRNA processing	IEP	Predict GO terms from Neighborhoods
CC	GO:0010445	nuclear dicing body	IEP	Predict GO terms from Neighborhoods
BP	GO:0010498	proteasomal protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010599	lsiRNA processing	IEP	Predict GO terms from Neighborhoods
MF	GO:0010997	anaphase-promoting complex binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0015074	DNA integration	IEP	Predict GO terms from Neighborhoods
MF	GO:0015137	citrate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015142	tricarboxylic acid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015746	citrate transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0016075	rRNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016570	histone modification	IEP	Predict GO terms from Neighborhoods
CC	GO:0016581	NuRD complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0016886	ligase activity, forming phosphoric ester bonds	IEP	Predict GO terms from Neighborhoods
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	Predict GO terms from Neighborhoods
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Predict GO terms from Neighborhoods
CC	GO:0017053	transcription repressor complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0017150	tRNA dihydrouridine synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0018205	peptidyl-lysine modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0021515	cell differentiation in spinal cord	IEP	Predict GO terms from Neighborhoods
BP	GO:0021522	spinal cord motor neuron differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0021953	central nervous system neuron differentiation	IEP	Predict GO terms from Neighborhoods
CC	GO:0030117	membrane coat	IEP	Predict GO terms from Neighborhoods
CC	GO:0030120	vesicle coat	IEP	Predict GO terms from Neighborhoods
CC	GO:0030126	COPI vesicle coat	IEP	Predict GO terms from Neighborhoods
BP	GO:0030163	protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030422	siRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0031047	gene silencing by RNA	IEP	Predict GO terms from Neighborhoods
BP	GO:0031109	microtubule polymerization or depolymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0031145	anaphase-promoting complex-dependent catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0031312	extrinsic component of organelle membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0031331	positive regulation of cellular catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0031461	cullin-RING ubiquitin ligase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0032006	regulation of TOR signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0032008	positive regulation of TOR signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0032268	regulation of cellular protein metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0032296	double-stranded RNA-specific ribonuclease activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0032502	developmental process	IEP	Predict GO terms from Neighborhoods
CC	GO:0032991	protein-containing complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0033567	DNA replication, Okazaki fragment processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0034514	mitochondrial unfolded protein response	IEP	Predict GO terms from Neighborhoods
BP	GO:0034620	cellular response to unfolded protein	IEP	Predict GO terms from Neighborhoods
BP	GO:0034661	ncRNA catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0034708	methyltransferase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0035097	histone methyltransferase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0035195	miRNA-mediated gene silencing	IEP	Predict GO terms from Neighborhoods
BP	GO:0035196	miRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0035279	miRNA-mediated gene silencing by mRNA destabilization	IEP	Predict GO terms from Neighborhoods
BP	GO:0035510	DNA dealkylation	IEP	Predict GO terms from Neighborhoods
CC	GO:0035618	root hair	IEP	Predict GO terms from Neighborhoods
BP	GO:0035753	maintenance of DNA trinucleotide repeats	IEP	Predict GO terms from Neighborhoods
BP	GO:0035967	cellular response to topologically incorrect protein	IEP	Predict GO terms from Neighborhoods
BP	GO:0040035	hermaphrodite genitalia development	IEP	Predict GO terms from Neighborhoods
BP	GO:0042026	protein refolding	IEP	Predict GO terms from Neighborhoods
MF	GO:0042826	histone deacetylase binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0043023	ribosomal large subunit binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043570	maintenance of DNA repeat elements	IEP	Predict GO terms from Neighborhoods
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044248	cellular catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044265	cellular macromolecule catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0044666	MLL3/4 complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0044728	DNA methylation or demethylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045138	nematode male tail tip morphogenesis	IEP	Predict GO terms from Neighborhoods
CC	GO:0048188	Set1C/COMPASS complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0048317	seed morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048513	animal organ development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048522	positive regulation of cellular process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048557	embryonic digestive tract morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048562	embryonic organ morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048608	reproductive structure development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048666	neuron development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048806	genitalia development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048869	cellular developmental process	IEP	Predict GO terms from Neighborhoods
BP	GO:0050779	RNA destabilization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051013	microtubule severing	IEP	Predict GO terms from Neighborhoods
BP	GO:0051036	regulation of endosome size	IEP	Predict GO terms from Neighborhoods
BP	GO:0051084	'de novo' post-translational protein folding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051085	chaperone cofactor-dependent protein refolding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051261	protein depolymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051438	regulation of ubiquitin-protein transferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051443	positive regulation of ubiquitin-protein transferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051568	histone H3-K4 methylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0055106	ubiquitin-protein transferase regulator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0060290	transdifferentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0061157	mRNA destabilization	IEP	Predict GO terms from Neighborhoods
BP	GO:0061919	process utilizing autophagic mechanism	IEP	Predict GO terms from Neighborhoods
CC	GO:0070176	DRM complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0070988	demethylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0071483	cellular response to blue light	IEP	Predict GO terms from Neighborhoods
BP	GO:0072344	rescue of stalled ribosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0080008	Cul4-RING E3 ubiquitin ligase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0080111	DNA demethylation	IEP	Predict GO terms from Neighborhoods
CC	GO:0090545	CHD-type complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0090571	RNA polymerase II transcription repressor complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0090598	male anatomical structure morphogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0097027	ubiquitin-protein transferase activator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0097494	regulation of vesicle size	IEP	Predict GO terms from Neighborhoods
MF	GO:0106413	dihydrouridine synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Predict GO terms from Neighborhoods
CC	GO:0140535	intracellular protein-containing complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	Predict GO terms from Neighborhoods
BP	GO:1903461	Okazaki fragment processing involved in mitotic DNA replication	IEP	Predict GO terms from Neighborhoods
BP	GO:1903649	regulation of cytoplasmic transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1903651	positive regulation of cytoplasmic transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1904666	regulation of ubiquitin protein ligase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1904668	positive regulation of ubiquitin protein ligase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1904975	response to bleomycin	IEP	Predict GO terms from Neighborhoods
BP	GO:1905784	regulation of anaphase-promoting complex-dependent catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1905786	positive regulation of anaphase-promoting complex-dependent catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:1990112	RQC complex	IEP	Predict GO terms from Neighborhoods
BP	GO:1990116	ribosome-associated ubiquitin-dependent protein catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:1990234	transferase complex	IEP	Predict GO terms from Neighborhoods
MF	GO:1990757	ubiquitin ligase activator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:2000034	regulation of seed maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000641	regulation of early endosome to late endosome transport	IEP	Predict GO terms from Neighborhoods
BP	GO:2000643	positive regulation of early endosome to late endosome transport	IEP	Predict GO terms from Neighborhoods
BP	GO:2000683	regulation of cellular response to X-ray	IEP	Predict GO terms from Neighborhoods
BP	GO:2000685	positive regulation of cellular response to X-ray	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR036034	PDZ_sf	217	263
IPR008915	Peptidase_M50	129	513

External Links

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SOLTUB.AGRIA.G00000001774

Expression Profile

Co-expression Networks

Functional Annotation