SOLTUB.AGRIA.G00000018282


Description : Unknown protein


Gene families : OG_02_0043685 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000018282
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_254


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000012 single strand break repair IEP Predict GO terms from Neighborhoods
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predict GO terms from Neighborhoods
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predict GO terms from Neighborhoods
BP GO:0000380 alternative mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0000398 mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
CC GO:0000419 RNA polymerase V complex IEP Predict GO terms from Neighborhoods
MF GO:0001091 RNA polymerase II general transcription initiation factor binding IEP Predict GO terms from Neighborhoods
MF GO:0001093 TFIIB-class transcription factor binding IEP Predict GO terms from Neighborhoods
BP GO:0001824 blastocyst development IEP Predict GO terms from Neighborhoods
BP GO:0002225 positive regulation of antimicrobial peptide production IEP Predict GO terms from Neighborhoods
BP GO:0002230 positive regulation of defense response to virus by host IEP Predict GO terms from Neighborhoods
BP GO:0002684 positive regulation of immune system process IEP Predict GO terms from Neighborhoods
BP GO:0002759 regulation of antimicrobial humoral response IEP Predict GO terms from Neighborhoods
BP GO:0002760 positive regulation of antimicrobial humoral response IEP Predict GO terms from Neighborhoods
BP GO:0002761 regulation of myeloid leukocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0002763 positive regulation of myeloid leukocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0002784 regulation of antimicrobial peptide production IEP Predict GO terms from Neighborhoods
BP GO:0002920 regulation of humoral immune response IEP Predict GO terms from Neighborhoods
BP GO:0002922 positive regulation of humoral immune response IEP Predict GO terms from Neighborhoods
BP GO:0002943 tRNA dihydrouridine synthesis IEP Predict GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Predict GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003909 DNA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0003910 DNA ligase (ATP) activity IEP Predict GO terms from Neighborhoods
MF GO:0004518 nuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004519 endonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004525 ribonuclease III activity IEP Predict GO terms from Neighborhoods
MF GO:0004659 prenyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004661 protein geranylgeranyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004663 Rab geranylgeranyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004693 cyclin-dependent protein serine/threonine kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Predict GO terms from Neighborhoods
MF GO:0005539 glycosaminoglycan binding IEP Predict GO terms from Neighborhoods
CC GO:0005637 nuclear inner membrane IEP Predict GO terms from Neighborhoods
CC GO:0005654 nucleoplasm IEP Predict GO terms from Neighborhoods
CC GO:0005669 transcription factor TFIID complex IEP Predict GO terms from Neighborhoods
CC GO:0005681 spliceosomal complex IEP Predict GO terms from Neighborhoods
CC GO:0005689 U12-type spliceosomal complex IEP Predict GO terms from Neighborhoods
CC GO:0005968 Rab-protein geranylgeranyltransferase complex IEP Predict GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006266 DNA ligation IEP Predict GO terms from Neighborhoods
BP GO:0006281 DNA repair IEP Predict GO terms from Neighborhoods
BP GO:0006284 base-excision repair IEP Predict GO terms from Neighborhoods
BP GO:0006302 double-strand break repair IEP Predict GO terms from Neighborhoods
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Predict GO terms from Neighborhoods
BP GO:0006304 DNA modification IEP Predict GO terms from Neighborhoods
BP GO:0006310 DNA recombination IEP Predict GO terms from Neighborhoods
BP GO:0006325 chromatin organization IEP Predict GO terms from Neighborhoods
BP GO:0006338 chromatin remodeling IEP Predict GO terms from Neighborhoods
BP GO:0006346 DNA methylation-dependent heterochromatin formation IEP Predict GO terms from Neighborhoods
BP GO:0006352 DNA-templated transcription initiation IEP Predict GO terms from Neighborhoods
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP Predict GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006397 mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006974 cellular response to DNA damage stimulus IEP Predict GO terms from Neighborhoods
BP GO:0007088 regulation of mitotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0007089 traversing start control point of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0007094 mitotic spindle assembly checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0007127 meiosis I IEP Predict GO terms from Neighborhoods
BP GO:0007249 I-kappaB kinase/NF-kappaB signaling IEP Predict GO terms from Neighborhoods
BP GO:0007276 gamete generation IEP Predict GO terms from Neighborhoods
BP GO:0007569 obsolete cell aging IEP Predict GO terms from Neighborhoods
CC GO:0008023 transcription elongation factor complex IEP Predict GO terms from Neighborhoods
MF GO:0008201 heparin binding IEP Predict GO terms from Neighborhoods
BP GO:0008285 negative regulation of cell population proliferation IEP Predict GO terms from Neighborhoods
MF GO:0008318 protein prenyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0008380 RNA splicing IEP Predict GO terms from Neighborhoods
BP GO:0008592 regulation of Toll signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP Predict GO terms from Neighborhoods
BP GO:0009616 RNAi-mediated antiviral immune response IEP Predict GO terms from Neighborhoods
BP GO:0010018 far-red light signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010225 response to UV-C IEP Predict GO terms from Neighborhoods
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP Predict GO terms from Neighborhoods
CC GO:0010369 chromocenter IEP Predict GO terms from Neighborhoods
CC GO:0010445 nuclear dicing body IEP Predict GO terms from Neighborhoods
BP GO:0010468 regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010599 lsiRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0010629 negative regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010639 negative regulation of organelle organization IEP Predict GO terms from Neighborhoods
BP GO:0010941 regulation of cell death IEP Predict GO terms from Neighborhoods
BP GO:0015074 DNA integration IEP Predict GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016075 rRNA catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016251 RNA polymerase II general transcription initiation factor activity IEP Predict GO terms from Neighborhoods
CC GO:0016604 nuclear body IEP Predict GO terms from Neighborhoods
CC GO:0016607 nuclear speck IEP Predict GO terms from Neighborhoods
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predict GO terms from Neighborhoods
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predict GO terms from Neighborhoods
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0018107 peptidyl-threonine phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0018210 peptidyl-threonine modification IEP Predict GO terms from Neighborhoods
BP GO:0018342 protein prenylation IEP Predict GO terms from Neighborhoods
BP GO:0018344 protein geranylgeranylation IEP Predict GO terms from Neighborhoods
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019222 regulation of metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0019840 isoprenoid binding IEP Predict GO terms from Neighborhoods
BP GO:0021796 cerebral cortex regionalization IEP Predict GO terms from Neighborhoods
BP GO:0022402 cell cycle process IEP Predict GO terms from Neighborhoods
BP GO:0030218 erythrocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0030263 apoptotic chromosome condensation IEP Predict GO terms from Neighborhoods
BP GO:0031047 gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:0031048 small non-coding RNA-dependent heterochromatin formation IEP Predict GO terms from Neighborhoods
BP GO:0031109 microtubule polymerization or depolymerization IEP Predict GO terms from Neighborhoods
BP GO:0031323 regulation of cellular metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031326 regulation of cellular biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0031507 heterochromatin formation IEP Predict GO terms from Neighborhoods
BP GO:0031577 spindle checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0031647 regulation of protein stability IEP Predict GO terms from Neighborhoods
BP GO:0031935 obsolete regulation of chromatin silencing IEP Predict GO terms from Neighborhoods
CC GO:0031965 nuclear membrane IEP Predict GO terms from Neighborhoods
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0032774 RNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0032952 regulation of (1->3)-beta-D-glucan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032953 regulation of (1->3)-beta-D-glucan biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:0033046 negative regulation of sister chromatid segregation IEP Predict GO terms from Neighborhoods
BP GO:0033047 regulation of mitotic sister chromatid segregation IEP Predict GO terms from Neighborhoods
BP GO:0033048 negative regulation of mitotic sister chromatid segregation IEP Predict GO terms from Neighborhoods
BP GO:0033119 negative regulation of RNA splicing IEP Predict GO terms from Neighborhoods
BP GO:0033567 DNA replication, Okazaki fragment processing IEP Predict GO terms from Neighborhoods
MF GO:0034003 vetispiradiene synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0034005 germacrene-A synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034661 ncRNA catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0035101 FACT complex IEP Predict GO terms from Neighborhoods
CC GO:0035145 exon-exon junction complex IEP Predict GO terms from Neighborhoods
BP GO:0035196 miRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0035279 miRNA-mediated gene silencing by mRNA destabilization IEP Predict GO terms from Neighborhoods
BP GO:0035510 DNA dealkylation IEP Predict GO terms from Neighborhoods
BP GO:0035753 maintenance of DNA trinucleotide repeats IEP Predict GO terms from Neighborhoods
CC GO:0036064 ciliary basal body IEP Predict GO terms from Neighborhoods
BP GO:0040019 positive regulation of embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0040029 epigenetic regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0042127 regulation of cell population proliferation IEP Predict GO terms from Neighborhoods
MF GO:0042393 histone binding IEP Predict GO terms from Neighborhoods
BP GO:0042750 hibernation IEP Predict GO terms from Neighborhoods
BP GO:0042753 positive regulation of circadian rhythm IEP Predict GO terms from Neighborhoods
BP GO:0042981 regulation of apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043067 regulation of programmed cell death IEP Predict GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043484 regulation of RNA splicing IEP Predict GO terms from Neighborhoods
BP GO:0043487 regulation of RNA stability IEP Predict GO terms from Neighborhoods
BP GO:0043488 regulation of mRNA stability IEP Predict GO terms from Neighborhoods
BP GO:0043570 maintenance of DNA repeat elements IEP Predict GO terms from Neighborhoods
BP GO:0044030 regulation of DNA methylation IEP Predict GO terms from Neighborhoods
BP GO:0044182 filamentous growth of a population of unicellular organisms IEP Predict GO terms from Neighborhoods
BP GO:0044728 DNA methylation or demethylation IEP Predict GO terms from Neighborhoods
BP GO:0045339 farnesyl diphosphate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045639 positive regulation of myeloid cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045655 regulation of monocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045657 positive regulation of monocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045752 positive regulation of Toll signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0045814 negative regulation of gene expression, epigenetic IEP Predict GO terms from Neighborhoods
BP GO:0045839 negative regulation of mitotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0045841 negative regulation of mitotic metaphase/anaphase transition IEP Predict GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046785 microtubule polymerization IEP Predict GO terms from Neighborhoods
MF GO:0047461 (+)-delta-cadinene synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0048025 negative regulation of mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0048145 regulation of fibroblast proliferation IEP Predict GO terms from Neighborhoods
BP GO:0048147 negative regulation of fibroblast proliferation IEP Predict GO terms from Neighborhoods
BP GO:0048317 seed morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048442 sepal development IEP Predict GO terms from Neighborhoods
BP GO:0048518 positive regulation of biological process IEP Predict GO terms from Neighborhoods
BP GO:0048522 positive regulation of cellular process IEP Predict GO terms from Neighborhoods
BP GO:0048826 cotyledon morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050684 regulation of mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0050686 negative regulation of mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0050691 regulation of defense response to virus by host IEP Predict GO terms from Neighborhoods
BP GO:0050821 protein stabilization IEP Predict GO terms from Neighborhoods
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051252 regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051457 maintenance of protein location in nucleus IEP Predict GO terms from Neighborhoods
BP GO:0051783 regulation of nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0051784 negative regulation of nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0051985 negative regulation of chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:0060255 regulation of macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0061013 regulation of mRNA catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0061574 ASAP complex IEP Predict GO terms from Neighborhoods
MF GO:0070181 small ribosomal subunit rRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0070828 heterochromatin organization IEP Predict GO terms from Neighborhoods
BP GO:0070918 small regulatory ncRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0071173 spindle assembly checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0071174 mitotic spindle checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0071490 cellular response to far red light IEP Predict GO terms from Neighborhoods
BP GO:0072595 maintenance of protein localization in organelle IEP Predict GO terms from Neighborhoods
BP GO:0080090 regulation of primary metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0080111 DNA demethylation IEP Predict GO terms from Neighborhoods
BP GO:0080188 gene silencing by RNA-directed DNA methylation IEP Predict GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090377 seed trichome initiation IEP Predict GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Predict GO terms from Neighborhoods
BP GO:0097354 prenylation IEP Predict GO terms from Neighborhoods
MF GO:0097472 cyclin-dependent protein kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0102698 5-epi-aristolochene synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0106413 dihydrouridine synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0120033 negative regulation of plasma membrane bounded cell projection assembly IEP Predict GO terms from Neighborhoods
MF GO:0140223 general transcription initiation factor activity IEP Predict GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:0140718 facultative heterochromatin formation IEP Predict GO terms from Neighborhoods
BP GO:1900087 positive regulation of G1/S transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Predict GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Predict GO terms from Neighborhoods
BP GO:1901672 positive regulation of systemic acquired resistance IEP Predict GO terms from Neighborhoods
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1902017 regulation of cilium assembly IEP Predict GO terms from Neighborhoods
BP GO:1902018 negative regulation of cilium assembly IEP Predict GO terms from Neighborhoods
BP GO:1902100 negative regulation of metaphase/anaphase transition of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1902105 regulation of leukocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:1902107 positive regulation of leukocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:1902116 negative regulation of organelle assembly IEP Predict GO terms from Neighborhoods
BP GO:1902288 regulation of defense response to oomycetes IEP Predict GO terms from Neighborhoods
BP GO:1902290 positive regulation of defense response to oomycetes IEP Predict GO terms from Neighborhoods
BP GO:1902808 positive regulation of cell cycle G1/S phase transition IEP Predict GO terms from Neighborhoods
BP GO:1903311 regulation of mRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903312 negative regulation of mRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903313 positive regulation of mRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903461 Okazaki fragment processing involved in mitotic DNA replication IEP Predict GO terms from Neighborhoods
BP GO:1903708 positive regulation of hemopoiesis IEP Predict GO terms from Neighborhoods
BP GO:1904975 response to bleomycin IEP Predict GO terms from Neighborhoods
BP GO:1905819 negative regulation of chromosome separation IEP Predict GO terms from Neighborhoods
CC GO:1990047 spindle matrix IEP Predict GO terms from Neighborhoods
BP GO:1990403 embryonic brain development IEP Predict GO terms from Neighborhoods
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2000683 regulation of cellular response to X-ray IEP Predict GO terms from Neighborhoods
BP GO:2000685 positive regulation of cellular response to X-ray IEP Predict GO terms from Neighborhoods
BP GO:2000816 negative regulation of mitotic sister chromatid separation IEP Predict GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!