SOLTUB.AGRIA.G00000022469

Description : NUP50 (Nucleoporin 50 kDa) protein

Gene families : OG_02_0022826 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000022469
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_83

Type	GO Term	Name	Evidence	Source
BP	GO:0000054	ribosomal subunit export from nucleus	None	Extended
BP	GO:0000056	ribosomal small subunit export from nucleus	IEA	AHRD
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005643	nuclear pore	IEA	AHRD
CC	GO:0005654	nucleoplasm	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
BP	GO:0006109	regulation of carbohydrate metabolic process	None	Extended
BP	GO:0006606	protein import into nucleus	IEA	AHRD
BP	GO:0006611	protein export from nucleus	IEA	AHRD
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006913	nucleocytoplasmic transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	IEA	AHRD
BP	GO:0010675	regulation of cellular carbohydrate metabolic process	None	Extended
BP	GO:0010906	regulation of glucose metabolic process	IEA	AHRD
BP	GO:0015031	protein transport	None	Extended
CC	GO:0016020	membrane	IEA	AHRD
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
MF	GO:0019789	SUMO transferase activity	IEA	AHRD
MF	GO:0019899	enzyme binding	None	Extended
MF	GO:0031267	small GTPase binding	IEA	AHRD
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031503	protein-containing complex localization	None	Extended
BP	GO:0031938	obsolete regulation of chromatin silencing at telomere	IEA	AHRD
BP	GO:0032501	multicellular organismal process	IEA	AHRD
BP	GO:0032502	developmental process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0033750	ribosome localization	None	Extended
BP	GO:0034504	protein localization to nucleus	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
MF	GO:0046332	SMAD binding	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	IEA	AHRD
BP	GO:0048856	anatomical structure development	IEA	AHRD
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050790	regulation of catalytic activity	IEA	AHRD
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0051020	GTPase binding	None	Extended
BP	GO:0051168	nuclear export	None	Extended
BP	GO:0051169	nuclear transport	None	Extended
BP	GO:0051170	import into nucleus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051640	organelle localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051656	establishment of organelle localization	None	Extended
BP	GO:0062012	regulation of small molecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
MF	GO:0070412	R-SMAD binding	IEA	AHRD
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0001671	ATPase activator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0003714	transcription corepressor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004683	calmodulin-dependent protein kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004697	protein kinase C activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004698	calcium-dependent protein kinase C activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005929	cilium	IEP	Predict GO terms from Neighborhoods
CC	GO:0005930	axoneme	IEP	Predict GO terms from Neighborhoods
BP	GO:0006458	'de novo' protein folding	IEP	Predict GO terms from Neighborhoods
MF	GO:0009931	calcium-dependent protein serine/threonine kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010152	pollen maturation	IEP	Predict GO terms from Neighborhoods
MF	GO:0010313	phytochrome binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0010857	calcium-dependent protein kinase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0030176	integral component of endoplasmic reticulum membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0030433	ubiquitin-dependent ERAD pathway	IEP	Predict GO terms from Neighborhoods
MF	GO:0030544	Hsp70 protein binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0031227	intrinsic component of endoplasmic reticulum membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031514	motile cilium	IEP	Predict GO terms from Neighborhoods
BP	GO:0032781	positive regulation of ATP-dependent activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0035966	response to topologically incorrect protein	IEP	Predict GO terms from Neighborhoods
BP	GO:0035967	cellular response to topologically incorrect protein	IEP	Predict GO terms from Neighborhoods
CC	GO:0036126	sperm flagellum	IEP	Predict GO terms from Neighborhoods
BP	GO:0036503	ERAD pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0042026	protein refolding	IEP	Predict GO terms from Neighborhoods
CC	GO:0043197	dendritic spine	IEP	Predict GO terms from Neighborhoods
BP	GO:0043266	regulation of potassium ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0043462	regulation of ATP-dependent activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043618	regulation of transcription from RNA polymerase II promoter in response to stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0043620	regulation of DNA-templated transcription in response to stress	IEP	Predict GO terms from Neighborhoods
MF	GO:0044183	protein folding chaperone	IEP	Predict GO terms from Neighborhoods
CC	GO:0044309	neuron spine	IEP	Predict GO terms from Neighborhoods
MF	GO:0048027	mRNA 5'-UTR binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0048497	maintenance of floral organ identity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051084	'de novo' post-translational protein folding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051085	chaperone cofactor-dependent protein refolding	IEP	Predict GO terms from Neighborhoods
MF	GO:0051087	chaperone binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0051117	ATPase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051788	response to misfolded protein	IEP	Predict GO terms from Neighborhoods
BP	GO:0061077	chaperone-mediated protein folding	IEP	Predict GO terms from Neighborhoods
CC	GO:0061827	sperm head	IEP	Predict GO terms from Neighborhoods
BP	GO:0071218	cellular response to misfolded protein	IEP	Predict GO terms from Neighborhoods
BP	GO:0090083	regulation of inclusion body assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0090084	negative regulation of inclusion body assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0090700	maintenance of plant organ identity	IEP	Predict GO terms from Neighborhoods
BP	GO:0097201	negative regulation of transcription from RNA polymerase II promoter in response to stress	IEP	Predict GO terms from Neighborhoods
CC	GO:0097224	sperm connecting piece	IEP	Predict GO terms from Neighborhoods
CC	GO:0097729	9+2 motile cilium	IEP	Predict GO terms from Neighborhoods
CC	GO:0098794	postsynapse	IEP	Predict GO terms from Neighborhoods
CC	GO:0099522	cytosolic region	IEP	Predict GO terms from Neighborhoods
CC	GO:0099524	postsynaptic cytosol	IEP	Predict GO terms from Neighborhoods
MF	GO:0140677	molecular function activator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1901001	negative regulation of response to salt stress	IEP	Predict GO terms from Neighborhoods
BP	GO:1901016	regulation of potassium ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1901379	regulation of potassium ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1901979	regulation of inward rectifier potassium channel activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1902584	positive regulation of response to water deprivation	IEP	Predict GO terms from Neighborhoods
BP	GO:1904158	axonemal central apparatus assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:2001257	regulation of cation channel activity	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR015007	NUP2/50/61	12	75
IPR000156	Ran_bind_dom	320	435

External Links

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SOLTUB.AGRIA.G00000022469

Expression Profile

Co-expression Networks

Functional Annotation