SOLTUB.AGRIA.G00000022789


Description : Histone deacetylase


Gene families : OG_02_0009625 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000022789
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_134


Type GO Term Name Evidence Source
CC GO:0000792 heterochromatin IEA AHRD
MF GO:0000979 RNA polymerase II core promoter sequence-specific DNA binding IEA AHRD
MF GO:0001222 transcription corepressor binding IEA AHRD
BP GO:0001975 response to amphetamine IEA AHRD
MF GO:0002039 p53 binding IEA AHRD
MF GO:0003714 transcription corepressor activity IEA AHRD
CC GO:0005657 replication fork IEA AHRD
CC GO:0005705 polytene chromosome interband IEA AHRD
CC GO:0005730 nucleolus IEA AHRD
CC GO:0005829 cytosol IEA AHRD
BP GO:0006346 DNA methylation-dependent heterochromatin formation IEA AHRD
BP GO:0007350 blastoderm segmentation IEA AHRD
BP GO:0007492 endoderm development IEA AHRD
MF GO:0008270 zinc ion binding IEA AHRD
BP GO:0008284 positive regulation of cell population proliferation IEA AHRD
BP GO:0008340 determination of adult lifespan IEA AHRD
BP GO:0009294 DNA-mediated transformation IEA AHRD
BP GO:0009737 response to abscisic acid IEA AHRD
BP GO:0009793 embryo development ending in seed dormancy IEA AHRD
BP GO:0009861 jasmonic acid and ethylene-dependent systemic resistance IEA AHRD
BP GO:0009913 epidermal cell differentiation IEA AHRD
CC GO:0009941 chloroplast envelope IEA AHRD
BP GO:0010228 vegetative to reproductive phase transition of meristem IEA AHRD
BP GO:0010431 seed maturation IEA AHRD
BP GO:0010718 positive regulation of epithelial to mesenchymal transition IEA AHRD
BP GO:0016441 post-transcriptional gene silencing IEA AHRD
CC GO:0016580 Sin3 complex IEA AHRD
CC GO:0016581 NuRD complex IEA AHRD
BP GO:0021766 hippocampus development IEA AHRD
BP GO:0030261 chromosome condensation IEA AHRD
BP GO:0031000 response to caffeine IEA AHRD
MF GO:0031072 heat shock protein binding IEA AHRD
MF GO:0031490 chromatin DNA binding IEA AHRD
CC GO:0031523 Myb complex IEA AHRD
MF GO:0032041 NAD-dependent histone deacetylase activity (H3-K14 specific) IEA AHRD
BP GO:0032496 response to lipopolysaccharide IEA AHRD
BP GO:0032732 positive regulation of interleukin-1 production IEA AHRD
BP GO:0032760 positive regulation of tumor necrosis factor production IEA AHRD
BP GO:0032922 circadian regulation of gene expression IEA AHRD
MF GO:0034739 histone deacetylase activity (H4-K16 specific) IEA AHRD
BP GO:0035065 regulation of histone acetylation IEA AHRD
CC GO:0035098 ESC/E(Z) complex IEA AHRD
MF GO:0035851 Krueppel-associated box domain binding IEA AHRD
BP GO:0035984 cellular response to trichostatin A IEA AHRD
BP GO:0042475 odontogenesis of dentin-containing tooth IEA AHRD
BP GO:0042531 positive regulation of tyrosine phosphorylation of STAT protein IEA AHRD
BP GO:0042733 embryonic digit morphogenesis IEA AHRD
BP GO:0042742 defense response to bacterium IEA AHRD
MF GO:0042826 histone deacetylase binding IEA AHRD
CC GO:0043005 neuron projection IEA AHRD
CC GO:0043025 neuronal cell body IEA AHRD
BP GO:0043124 negative regulation of I-kappaB kinase/NF-kappaB signaling IEA AHRD
BP GO:0043392 negative regulation of DNA binding IEA AHRD
BP GO:0043433 negative regulation of DNA-binding transcription factor activity IEA AHRD
BP GO:0043524 negative regulation of neuron apoptotic process IEA AHRD
BP GO:0043922 negative regulation by host of viral transcription IEA AHRD
MF GO:0044877 protein-containing complex binding IEA AHRD
BP GO:0045664 regulation of neuron differentiation IEA AHRD
BP GO:0045862 positive regulation of proteolysis IEA AHRD
BP GO:0045879 negative regulation of smoothened signaling pathway IEA AHRD
BP GO:0045944 positive regulation of transcription by RNA polymerase II IEA AHRD
BP GO:0046676 negative regulation of insulin secretion IEA AHRD
MF GO:0047485 protein N-terminus binding IEA AHRD
CC GO:0048471 perinuclear region of cytoplasm IEA AHRD
BP GO:0048477 oogenesis IEA AHRD
BP GO:0048510 regulation of timing of transition from vegetative to reproductive phase IEA AHRD
BP GO:0048714 positive regulation of oligodendrocyte differentiation IEA AHRD
BP GO:0050771 negative regulation of axonogenesis IEA AHRD
MF GO:0051059 NF-kappaB binding IEA AHRD
BP GO:0051091 positive regulation of DNA-binding transcription factor activity IEA AHRD
BP GO:0051896 regulation of protein kinase B signaling IEA AHRD
BP GO:0052548 regulation of endopeptidase activity IEA AHRD
BP GO:0055013 cardiac muscle cell development IEA AHRD
BP GO:0055093 response to hyperoxia IEA AHRD
BP GO:0060044 negative regulation of cardiac muscle cell proliferation IEA AHRD
BP GO:0060297 regulation of sarcomere organization IEA AHRD
BP GO:0060766 negative regulation of androgen receptor signaling pathway IEA AHRD
BP GO:0060789 hair follicle placode formation IEA AHRD
BP GO:0061000 negative regulation of dendritic spine development IEA AHRD
BP GO:0061029 eyelid development in camera-type eye IEA AHRD
BP GO:0061086 negative regulation of histone H3-K27 methylation IEA AHRD
BP GO:0061198 fungiform papilla formation IEA AHRD
BP GO:0070301 cellular response to hydrogen peroxide IEA AHRD
BP GO:0070829 obsolete heterochromatin maintenance IEA AHRD
MF GO:0070888 E-box binding IEA AHRD
BP GO:0070932 histone H3 deacetylation IEA AHRD
BP GO:0070933 histone H4 deacetylation IEA AHRD
BP GO:0070983 dendrite guidance IEA AHRD
BP GO:0071356 cellular response to tumor necrosis factor IEA AHRD
BP GO:0090090 negative regulation of canonical Wnt signaling pathway IEA AHRD
BP GO:0090311 regulation of protein deacetylation IEA AHRD
CC GO:0090571 RNA polymerase II transcription repressor complex IEA AHRD
BP GO:1901001 negative regulation of response to salt stress IEA AHRD
BP GO:1902437 positive regulation of male mating behavior IEA AHRD
BP GO:1902459 positive regulation of stem cell population maintenance IEA AHRD
BP GO:1902692 regulation of neuroblast proliferation IEA AHRD
BP GO:1902894 negative regulation of miRNA transcription IEA AHRD
MF GO:1990841 promoter-specific chromatin binding IEA AHRD
BP GO:2000273 positive regulation of signaling receptor activity IEA AHRD
BP GO:2000343 positive regulation of chemokine (C-X-C motif) ligand 2 production IEA AHRD
BP GO:2000676 positive regulation of type B pancreatic cell apoptotic process IEA AHRD
BP GO:2000757 negative regulation of peptidyl-lysine acetylation IEA AHRD
BP GO:2001229 negative regulation of response to gamma radiation IEA AHRD
BP GO:2001243 negative regulation of intrinsic apoptotic signaling pathway IEA AHRD
Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predict GO terms from Neighborhoods
BP GO:0002097 tRNA wobble base modification IEP Predict GO terms from Neighborhoods
BP GO:0002098 tRNA wobble uridine modification IEP Predict GO terms from Neighborhoods
BP GO:0002143 tRNA wobble position uridine thiolation IEP Predict GO terms from Neighborhoods
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predict GO terms from Neighborhoods
MF GO:0004792 thiosulfate sulfurtransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Predict GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006400 tRNA modification IEP Predict GO terms from Neighborhoods
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0007051 spindle organization IEP Predict GO terms from Neighborhoods
BP GO:0007052 mitotic spindle organization IEP Predict GO terms from Neighborhoods
MF GO:0008160 protein tyrosine phosphatase activator activity IEP Predict GO terms from Neighborhoods
MF GO:0008265 Mo-molybdopterin cofactor sulfurase activity IEP Predict GO terms from Neighborhoods
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predict GO terms from Neighborhoods
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predict GO terms from Neighborhoods
BP GO:0010563 negative regulation of phosphorus metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010921 regulation of phosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0010922 positive regulation of phosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0010923 negative regulation of phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0016779 nucleotidyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Predict GO terms from Neighborhoods
MF GO:0016783 sulfurtransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016859 cis-trans isomerase activity IEP Predict GO terms from Neighborhoods
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predict GO terms from Neighborhoods
MF GO:0016887 ATP hydrolysis activity IEP Predict GO terms from Neighborhoods
CC GO:0019008 molybdopterin synthase complex IEP Predict GO terms from Neighborhoods
MF GO:0019208 phosphatase regulator activity IEP Predict GO terms from Neighborhoods
MF GO:0019211 phosphatase activator activity IEP Predict GO terms from Neighborhoods
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0019888 protein phosphatase regulator activity IEP Predict GO terms from Neighborhoods
MF GO:0019902 phosphatase binding IEP Predict GO terms from Neighborhoods
MF GO:0019903 protein phosphatase binding IEP Predict GO terms from Neighborhoods
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0032447 protein urmylation IEP Predict GO terms from Neighborhoods
BP GO:0032515 negative regulation of phosphoprotein phosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0032516 positive regulation of phosphoprotein phosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0034227 tRNA thio-modification IEP Predict GO terms from Neighborhoods
CC GO:0034702 ion channel complex IEP Predict GO terms from Neighborhoods
CC GO:0034703 cation channel complex IEP Predict GO terms from Neighborhoods
CC GO:0034704 calcium channel complex IEP Predict GO terms from Neighborhoods
BP GO:0035303 regulation of dephosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0035304 regulation of protein dephosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0035305 negative regulation of dephosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0035306 positive regulation of dephosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0035307 positive regulation of protein dephosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0035308 negative regulation of protein dephosphorylation IEP Predict GO terms from Neighborhoods
MF GO:0042292 URM1 activating enzyme activity IEP Predict GO terms from Neighborhoods
BP GO:0043545 molybdopterin cofactor metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0045936 negative regulation of phosphate metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0046983 protein dimerization activity IEP Predict GO terms from Neighborhoods
BP GO:0051189 prosthetic group metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051345 positive regulation of hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0051346 negative regulation of hydrolase activity IEP Predict GO terms from Neighborhoods
MF GO:0051721 protein phosphatase 2A binding IEP Predict GO terms from Neighborhoods
MF GO:0061604 molybdopterin-synthase sulfurtransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0061605 molybdopterin-synthase adenylyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0070566 adenylyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0072542 protein phosphatase activator activity IEP Predict GO terms from Neighborhoods
CC GO:1902495 transmembrane transporter complex IEP Predict GO terms from Neighborhoods
BP GO:1902850 microtubule cytoskeleton organization involved in mitosis IEP Predict GO terms from Neighborhoods
CC GO:1903293 phosphatase complex IEP Predict GO terms from Neighborhoods
CC GO:1990351 transporter complex IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR023696 Ureohydrolase_dom_sf 22 387
IPR023801 His_deacetylse_dom 41 332
No external refs found!